RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 ACTBL2Q562R1 376 aa11.33□□□□□ -0.6
LITAF-208ENST00000571627 ZNF562Q6V9R5 426 aa11.33□□□□□ -0.6
LITAF-208ENST00000571627 PPP1R27Q86WC6 154 aa11.33□□□□□ -0.6
LITAF-208ENST00000571627 MFSD4AQ8N468 514 aa11.33□□□□□ -0.6
LITAF-208ENST00000571627 GRPEL2Q8TAA5 225 aa11.33□□□□□ -0.6
LITAF-208ENST00000571627 TCTEX1D2Q8WW35 142 aa11.33□□□□□ -0.6
LITAF-208ENST00000571627 ZNF2Q9BSG1 426 aaPredicted RBP11.33□□□□□ -0.6
LITAF-208ENST00000571627 SLIRPQ9GZT3 109 aaKnown RBP11.33□□□□□ -0.6
LITAF-208ENST00000571627 C6orf62Q9GZU0 229 aaPredicted RBP11.33□□□□□ -0.6
LITAF-208ENST00000571627 CCL28Q9NRJ3 127 aa11.33□□□□□ -0.6
LITAF-208ENST00000571627 RSL24D1Q9UHA3 163 aaKnown RBP11.33□□□□□ -0.6
LITAF-208ENST00000571627 FOXA2Q9Y261 457 aaPredicted RBP11.33□□□□□ -0.6
LITAF-208ENST00000571627 TNCP24821 2201 aa11.32□□□□□ -0.6
LITAF-208ENST00000571627 SRRM4A7MD48 611 aaKnown RBP11.32□□□□□ -0.6
LITAF-208ENST00000571627 ARPC1BO15143 372 aaKnown RBP11.32□□□□□ -0.6
LITAF-208ENST00000571627 FCGR3BO75015 233 aa11.32□□□□□ -0.6
LITAF-208ENST00000571627 KIR2DS2P43631 304 aa11.32□□□□□ -0.6
LITAF-208ENST00000571627 KRTAP10-11P60412 298 aa11.32□□□□□ -0.6
LITAF-208ENST00000571627 TSPAN5P62079 268 aa11.32□□□□□ -0.6
LITAF-208ENST00000571627 GNB1P62873 340 aa11.32□□□□□ -0.6
LITAF-208ENST00000571627 RPL30P62888 115 aaKnown RBP11.32□□□□□ -0.6
LITAF-208ENST00000571627 SSBP2P81877 361 aaPredicted RBP11.32□□□□□ -0.6
LITAF-208ENST00000571627 TMEM267Q0VDI3 215 aaPredicted RBP11.32□□□□□ -0.6
LITAF-208ENST00000571627 EIF4EBP1Q13541 118 aaPredicted RBP11.32□□□□□ -0.6
LITAF-208ENST00000571627 VMA21Q3ZAQ7 101 aa11.32□□□□□ -0.6
LITAF-208ENST00000571627 UNQ5815/PRO19632Q6UWF5 114 aa11.32□□□□□ -0.6
LITAF-208ENST00000571627 TCTEX1D1Q8N7M0 179 aa11.32□□□□□ -0.6
LITAF-208ENST00000571627 ZNF491Q8N8L2 437 aa11.32□□□□□ -0.6
LITAF-208ENST00000571627 TEX45Q8NA69 505 aa11.32□□□□□ -0.6
LITAF-208ENST00000571627 LFNGQ8NES3 379 aa11.32□□□□□ -0.6
LITAF-208ENST00000571627 OR4S2Q8NH73 311 aa11.32□□□□□ -0.6
LITAF-208ENST00000571627 MCFD2Q8NI22 146 aa11.32□□□□□ -0.6
LITAF-208ENST00000571627 FCAMRQ8WWV6 532 aa11.32□□□□□ -0.6
LITAF-208ENST00000571627 ARPC1AQ92747 370 aa11.32□□□□□ -0.6
LITAF-208ENST00000571627 MOB3AQ96BX8 217 aa11.32□□□□□ -0.6
LITAF-208ENST00000571627 DIRAS2Q96HU8 199 aa11.32□□□□□ -0.6
LITAF-208ENST00000571627 ABHD1Q96SE0 405 aa11.32□□□□□ -0.6
LITAF-208ENST00000571627 DCUN1D5Q9BTE7 237 aa11.32□□□□□ -0.6
LITAF-208ENST00000571627 RBM38Q9H0Z9 239 aaKnown RBP11.32□□□□□ -0.6
LITAF-208ENST00000571627 TAS2R8Q9NYW2 309 aa11.32□□□□□ -0.6
LITAF-208ENST00000571627 MTFP1Q9UDX5 166 aa11.32□□□□□ -0.6
LITAF-208ENST00000571627 NUBP2Q9Y5Y2 271 aa11.32□□□□□ -0.6
LITAF-208ENST00000571627 GABARAPH6UMI1 98 aa11.31□□□□□ -0.6
LITAF-208ENST00000571627 DUS4LO95620 317 aaKnown RBP11.31□□□□□ -0.6
LITAF-208ENST00000571627 CRYGBP07316 175 aa11.31□□□□□ -0.6
LITAF-208ENST00000571627 TBPP20226 339 aa11.31□□□□□ -0.6
LITAF-208ENST00000571627 RAB9AP51151 201 aa11.31□□□□□ -0.6
LITAF-208ENST00000571627 UBE2KP61086 200 aa11.31□□□□□ -0.6
LITAF-208ENST00000571627 SSBP1Q04837 148 aaKnown RBP11.31□□□□□ -0.6
LITAF-208ENST00000571627 CATR1Q13166 79 aa11.31□□□□□ -0.6
LITAF-208ENST00000571627 FXYD3Q14802 87 aa11.31□□□□□ -0.6
LITAF-208ENST00000571627 OR2B11Q5JQS5 317 aa11.31□□□□□ -0.6
LITAF-208ENST00000571627 PYHIN1Q6K0P9 492 aa11.31□□□□□ -0.6
LITAF-208ENST00000571627 LPCAT3Q6P1A2 487 aa11.31□□□□□ -0.6
LITAF-208ENST00000571627 REC114Q7Z4M0 266 aa11.31□□□□□ -0.6
LITAF-208ENST00000571627 TMEM17Q86X19 198 aa11.31□□□□□ -0.6
LITAF-208ENST00000571627 OR52I2Q8NH67 350 aa11.31□□□□□ -0.6
LITAF-208ENST00000571627 MRAPQ8TCY5 172 aa11.31□□□□□ -0.6
LITAF-208ENST00000571627 UBE2E2Q96LR5 201 aa11.31□□□□□ -0.6
LITAF-208ENST00000571627 NXF2Q9GZY0 626 aaKnown RBP11.31□□□□□ -0.6
LITAF-208ENST00000571627 ALX4Q9H161 411 aaPredicted RBP11.31□□□□□ -0.6
LITAF-208ENST00000571627 KLK11Q9UBX7 282 aa11.31□□□□□ -0.6
LITAF-208ENST00000571627 VSIG4Q9Y279 399 aa11.31□□□□□ -0.6
LITAF-208ENST00000571627 I3L521 148 aa11.3□□□□□ -0.6
LITAF-208ENST00000571627 CTDSPLO15194 276 aa11.3□□□□□ -0.6
LITAF-208ENST00000571627 CREBL2O60519 120 aaPredicted RBP11.3□□□□□ -0.6
LITAF-208ENST00000571627 CNIH1O95406 144 aa11.3□□□□□ -0.6
LITAF-208ENST00000571627 IFNA6P05013 189 aa11.3□□□□□ -0.6
LITAF-208ENST00000571627 GNRHRP30968 328 aa11.3□□□□□ -0.6
LITAF-208ENST00000571627 IL18Q14116 193 aa11.3□□□□□ -0.6
LITAF-208ENST00000571627 RNASE12Q5GAN4 147 aaKnown RBP11.3□□□□□ -0.6
LITAF-208ENST00000571627 VAX1Q5SQQ9 334 aa11.3□□□□□ -0.6
LITAF-208ENST00000571627 ASPHD1Q5U4P2 390 aa11.3□□□□□ -0.6
LITAF-208ENST00000571627 IDO2Q6ZQW0 420 aa11.3□□□□□ -0.6
LITAF-208ENST00000571627 ZNF818PQ6ZRF7 136 aa11.3□□□□□ -0.6
LITAF-208ENST00000571627 CMTM1Q8IZ96 169 aa11.3□□□□□ -0.6
LITAF-208ENST00000571627 OR11H1Q8NG94 326 aa11.3□□□□□ -0.6
LITAF-208ENST00000571627 MS4A10Q96PG2 267 aa11.3□□□□□ -0.6
LITAF-208ENST00000571627 GPHA2Q96T91 129 aa11.3□□□□□ -0.6
LITAF-208ENST00000571627 AIFM2Q9BRQ8 373 aa11.3□□□□□ -0.6
LITAF-208ENST00000571627 RBFOX2O43251 390 aaKnown RBP eCLIP11.29□□□□□ -0.6
LITAF-208ENST00000571627 TNFSF12O43508 249 aa11.29□□□□□ -0.6
LITAF-208ENST00000571627 S100GP29377 79 aa11.29□□□□□ -0.6
LITAF-208ENST00000571627 FHL3Q13643 280 aa11.29□□□□□ -0.6
LITAF-208ENST00000571627 MRGPRG-AS1Q2M3A8 158 aa11.29□□□□□ -0.6
LITAF-208ENST00000571627 AKIRIN2Q53H80 203 aa11.29□□□□□ -0.6
LITAF-208ENST00000571627 RNASE10Q5GAN6 216 aaKnown RBP11.29□□□□□ -0.6
LITAF-208ENST00000571627 POC5Q8NA72 575 aa11.29□□□□□ -0.6
LITAF-208ENST00000571627 TMEM229BQ8NBD8 167 aa11.29□□□□□ -0.6
LITAF-208ENST00000571627 VSTM2AQ8TAG5 236 aa11.29□□□□□ -0.6
LITAF-208ENST00000571627 CD300LFQ8TDQ1 290 aa11.29□□□□□ -0.6
LITAF-208ENST00000571627 MCRIP2Q9BUT9 160 aaKnown RBP11.29□□□□□ -0.6
LITAF-208ENST00000571627 NDUFA13Q9P0J0 144 aa11.29□□□□□ -0.6
LITAF-208ENST00000571627 GPR31O00270 319 aa11.28□□□□□ -0.6
LITAF-208ENST00000571627 HRASP01112 189 aa11.28□□□□□ -0.6
LITAF-208ENST00000571627 APELAP0DMC3 54 aa11.28□□□□□ -0.6
LITAF-208ENST00000571627 TNFSF8P32971 234 aa11.28□□□□□ -0.6
LITAF-208ENST00000571627 UCP3P55916 312 aa11.28□□□□□ -0.6
LITAF-208ENST00000571627 TPPP2P59282 170 aa11.28□□□□□ -0.6
LITAF-208ENST00000571627 TAS2R19P59542 299 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms