RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 DPF1Q92782 380 aa10.51□□□□□ -0.73
CCDC40-205ENST00000571028 BORCS5Q969J3 196 aa10.51□□□□□ -0.73
CCDC40-205ENST00000571028 HARBI1Q96MB7 349 aa10.51□□□□□ -0.73
CCDC40-205ENST00000571028 AKIP1Q9NQ31 210 aa10.51□□□□□ -0.73
CCDC40-205ENST00000571028 PLSCR3Q9NRY6 295 aa10.51□□□□□ -0.73
CCDC40-205ENST00000571028 WI2-2373I1.2A0A1W2PRP0 233 aa10.5□□□□□ -0.73
CCDC40-205ENST00000571028 RRHO14718 337 aa10.5□□□□□ -0.73
CCDC40-205ENST00000571028 FGF16O43320 207 aa10.5□□□□□ -0.73
CCDC40-205ENST00000571028 SLC25A17O43808 307 aa10.5□□□□□ -0.73
CCDC40-205ENST00000571028 RRASP10301 218 aa10.5□□□□□ -0.73
CCDC40-205ENST00000571028 IL7P13232 177 aa10.5□□□□□ -0.73
CCDC40-205ENST00000571028 S100GP29377 79 aa10.5□□□□□ -0.73
CCDC40-205ENST00000571028 FAUP35544 74 aaKnown RBP10.5□□□□□ -0.73
CCDC40-205ENST00000571028 VDAC2P45880 294 aaPredicted RBP10.5□□□□□ -0.73
CCDC40-205ENST00000571028 EIF4EBP1Q13541 118 aaPredicted RBP10.5□□□□□ -0.73
CCDC40-205ENST00000571028 PSG5Q15238 335 aa10.5□□□□□ -0.73
CCDC40-205ENST00000571028 IDO2Q6ZQW0 420 aa10.5□□□□□ -0.73
CCDC40-205ENST00000571028 LHFPL1Q86WI0 220 aa10.5□□□□□ -0.73
CCDC40-205ENST00000571028 SLC38A6Q8IZM9 456 aa10.5□□□□□ -0.73
CCDC40-205ENST00000571028 SPAG16Q8N0X2 631 aa10.5□□□□□ -0.73
CCDC40-205ENST00000571028 WFDC9Q8NEX5 89 aa10.5□□□□□ -0.73
CCDC40-205ENST00000571028 OR8H1Q8NGG4 311 aa10.5□□□□□ -0.73
CCDC40-205ENST00000571028 OR13C8Q8NGS7 320 aa10.5□□□□□ -0.73
CCDC40-205ENST00000571028 S100ZQ8WXG8 99 aa10.5□□□□□ -0.73
CCDC40-205ENST00000571028 RCC1LQ96I51 464 aaKnown RBP10.5□□□□□ -0.73
CCDC40-205ENST00000571028 TSNAXQ99598 290 aaKnown RBP10.5□□□□□ -0.73
CCDC40-205ENST00000571028 RSRP1Q9BUV0 290 aa10.5□□□□□ -0.73
CCDC40-205ENST00000571028 METTL1Q9UBP6 276 aaKnown RBP10.5□□□□□ -0.73
CCDC40-205ENST00000571028 LINC00527Q9UJ94 153 aa10.5□□□□□ -0.73
CCDC40-205ENST00000571028 SCP2D1Q9UJQ7 156 aa10.5□□□□□ -0.73
CCDC40-205ENST00000571028 DNAH3Q8TD57 4116 aa10.49□□□□□ -0.73
CCDC40-205ENST00000571028 LINC01548A6NM66 108 aa10.49□□□□□ -0.73
CCDC40-205ENST00000571028 SRRM4A7MD48 611 aaKnown RBP10.49□□□□□ -0.73
CCDC40-205ENST00000571028 C3orf84H3BNL1 204 aa10.49□□□□□ -0.73
CCDC40-205ENST00000571028 RAMP3O60896 148 aa10.49□□□□□ -0.73
CCDC40-205ENST00000571028 DUS4LO95620 317 aaKnown RBP10.49□□□□□ -0.73
CCDC40-205ENST00000571028 RPA2P15927 270 aa10.49□□□□□ -0.73
CCDC40-205ENST00000571028 UCP3P55916 312 aa10.49□□□□□ -0.73
CCDC40-205ENST00000571028 GNB1P62873 340 aa10.49□□□□□ -0.73
CCDC40-205ENST00000571028 TAGLNQ01995 201 aaKnown RBP10.49□□□□□ -0.73
CCDC40-205ENST00000571028 MSMO1Q15800 293 aa10.49□□□□□ -0.73
CCDC40-205ENST00000571028 C5orf64Q2M2E5 130 aa10.49□□□□□ -0.73
CCDC40-205ENST00000571028 LIN54Q6MZP7 749 aa10.49□□□□□ -0.73
CCDC40-205ENST00000571028 SSX9Q7RTT3 188 aa10.49□□□□□ -0.73
CCDC40-205ENST00000571028 SLC35E3Q7Z769 313 aa10.49□□□□□ -0.73
CCDC40-205ENST00000571028 TBC1D26Q86UD7 250 aa10.49□□□□□ -0.73
CCDC40-205ENST00000571028 VKORC1L1Q8N0U8 176 aa10.49□□□□□ -0.73
CCDC40-205ENST00000571028 POC5Q8NA72 575 aa10.49□□□□□ -0.73
CCDC40-205ENST00000571028 OR4S2Q8NH73 311 aa10.49□□□□□ -0.73
CCDC40-205ENST00000571028 ZFAND1Q8TCF1 268 aa10.49□□□□□ -0.73
CCDC40-205ENST00000571028 ABHD5Q8WTS1 349 aa10.49□□□□□ -0.73
CCDC40-205ENST00000571028 PRRT1Q99946 306 aa10.49□□□□□ -0.73
CCDC40-205ENST00000571028 HSPB9Q9BQS6 159 aa10.49□□□□□ -0.73
CCDC40-205ENST00000571028 TPSG1Q9NRR2 321 aa10.49□□□□□ -0.73
CCDC40-205ENST00000571028 LIN7CQ9NUP9 197 aaKnown RBP10.49□□□□□ -0.73
CCDC40-205ENST00000571028 COPZ2Q9P299 210 aa10.49□□□□□ -0.73
CCDC40-205ENST00000571028 C14orf166Q9Y224 244 aaKnown RBP10.49□□□□□ -0.73
CCDC40-205ENST00000571028 FCN1O00602 326 aa10.48□□□□□ -0.73
CCDC40-205ENST00000571028 KIR2DS2P43631 304 aa10.48□□□□□ -0.73
CCDC40-205ENST00000571028 LPAR6P43657 344 aa10.48□□□□□ -0.73
CCDC40-205ENST00000571028 LGALS7P47929 136 aa10.48□□□□□ -0.73
CCDC40-205ENST00000571028 PIGPP57054 158 aa10.48□□□□□ -0.73
CCDC40-205ENST00000571028 ZNF846Q147U1 533 aa10.48□□□□□ -0.73
CCDC40-205ENST00000571028 VMA21Q3ZAQ7 101 aa10.48□□□□□ -0.73
CCDC40-205ENST00000571028 TMEM177Q53S58 311 aa10.48□□□□□ -0.73
CCDC40-205ENST00000571028 FAM71E2Q8N5Q1 922 aa10.48□□□□□ -0.73
CCDC40-205ENST00000571028 NPBQ8NG41 125 aa10.48□□□□□ -0.73
CCDC40-205ENST00000571028 MRGPRFQ96AM1 343 aa10.48□□□□□ -0.73
CCDC40-205ENST00000571028 NOL4LQ96MY1 436 aaPredicted RBP10.48□□□□□ -0.73
CCDC40-205ENST00000571028 RNF5Q99942 180 aa10.48□□□□□ -0.73
CCDC40-205ENST00000571028 GPR61Q9BZJ8 451 aa10.48□□□□□ -0.73
CCDC40-205ENST00000571028 SLC2A9Q9NRM0 540 aa10.48□□□□□ -0.73
CCDC40-205ENST00000571028 U3KQK5 164 aa10.48□□□□□ -0.73
CCDC40-205ENST00000571028 TEX13DA0A0J9YY54 714 aaPredicted RBP10.47□□□□□ -0.73
CCDC40-205ENST00000571028 ADARB2-AS1A8MUL3 147 aa10.47□□□□□ -0.73
CCDC40-205ENST00000571028 S1PR2O95136 353 aa10.47□□□□□ -0.73
CCDC40-205ENST00000571028 NDUFA3O95167 84 aa10.47□□□□□ -0.73
CCDC40-205ENST00000571028 IGLV2-23P01705 113 aa10.47□□□□□ -0.73
CCDC40-205ENST00000571028 NHLRC4P0CG21 123 aaPredicted RBP10.47□□□□□ -0.73
CCDC40-205ENST00000571028 BRWD1-AS2P59051 145 aa10.47□□□□□ -0.73
CCDC40-205ENST00000571028 KRTAP10-11P60412 298 aa10.47□□□□□ -0.73
CCDC40-205ENST00000571028 CENPVQ7Z7K6 275 aaPredicted RBP10.47□□□□□ -0.73
CCDC40-205ENST00000571028 Q8N2B8 174 aa10.47□□□□□ -0.73
CCDC40-205ENST00000571028 OSR1Q8TAX0 266 aaPredicted RBP10.47□□□□□ -0.73
CCDC40-205ENST00000571028 WDR12Q9GZL7 423 aaKnown RBP10.47□□□□□ -0.73
CCDC40-205ENST00000571028 PARP11Q9NR21 331 aa10.47□□□□□ -0.73
CCDC40-205ENST00000571028 SERTAD4Q9NUC0 356 aa10.47□□□□□ -0.73
CCDC40-205ENST00000571028 MPPED1O15442 326 aa10.46□□□□□ -0.73
CCDC40-205ENST00000571028 CA2P00918 260 aa10.46□□□□□ -0.73
CCDC40-205ENST00000571028 CTSDP07339 412 aaPredicted RBP10.46□□□□□ -0.73
CCDC40-205ENST00000571028 SAA1P0DJI8 122 aaPredicted RBP10.46□□□□□ -0.73
CCDC40-205ENST00000571028 F2RP25116 425 aa10.46□□□□□ -0.73
CCDC40-205ENST00000571028 HOXD3P31249 432 aaPredicted RBP10.46□□□□□ -0.73
CCDC40-205ENST00000571028 ECI1P42126 302 aa10.46□□□□□ -0.73
CCDC40-205ENST00000571028 CCR6P51684 374 aa10.46□□□□□ -0.73
CCDC40-205ENST00000571028 PJVKQ0ZLH3 352 aa10.46□□□□□ -0.73
CCDC40-205ENST00000571028 SP6Q3SY56 376 aa10.46□□□□□ -0.73
CCDC40-205ENST00000571028 LINC00299Q6ZSB3 139 aa10.46□□□□□ -0.73
CCDC40-205ENST00000571028 TMED4Q7Z7H5 227 aa10.46□□□□□ -0.73
CCDC40-205ENST00000571028 FOXRED2Q8IWF2 684 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms