RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, human

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT1-222	ENST00000570139	TMEM165	Q9HC07	324 aa		5.71	□□□□□ -1.5
CNOT1-222	ENST00000570139	EHF	Q9NZC4	300 aa		5.71	□□□□□ -1.5
CNOT1-222	ENST00000570139	KCNIP1	Q9NZI2	227 aa		5.71	□□□□□ -1.5
CNOT1-222	ENST00000570139	RPH3AL	Q9UNE2	315 aa		5.71	□□□□□ -1.5
CNOT1-222	ENST00000570139	MAP1B	P46821	2468 aa	Known RBP	5.71	□□□□□ -1.5
CNOT1-222	ENST00000570139	RP1L1	Q8IWN7	2480 aa	Predicted RBP	5.71	□□□□□ -1.5
CNOT1-222	ENST00000570139	MAST4	O15021	2626 aa		5.71	□□□□□ -1.5
CNOT1-222	ENST00000570139	UBR5	O95071	2799 aa	Predicted RBP	5.71	□□□□□ -1.5
CNOT1-222	ENST00000570139	MYO7B	Q6PIF6	2116 aa		5.71	□□□□□ -1.5
CNOT1-222	ENST00000570139	TRAV6	A0A075B6T7	132 aa		5.7	□□□□□ -1.5
CNOT1-222	ENST00000570139	PPIAL4E	A0A075B759	164 aa		5.7	□□□□□ -1.5
CNOT1-222	ENST00000570139	IGHV1-69-2	A0A0G2JMI3	117 aa		5.7	□□□□□ -1.5
CNOT1-222	ENST00000570139		A0A1B0GVG6	124 aa		5.7	□□□□□ -1.5
CNOT1-222	ENST00000570139	HELT	A6NFD8	242 aa		5.7	□□□□□ -1.5
CNOT1-222	ENST00000570139	RFPL4A	A6NLU0	287 aa		5.7	□□□□□ -1.5
CNOT1-222	ENST00000570139	RFPL4AL1	F8VTS6	287 aa		5.7	□□□□□ -1.5
CNOT1-222	ENST00000570139	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	5.7	□□□□□ -1.5
CNOT1-222	ENST00000570139	SIRPB1	O00241	398 aa		5.7	□□□□□ -1.5
CNOT1-222	ENST00000570139	FABP7	O15540	132 aa		5.7	□□□□□ -1.5
CNOT1-222	ENST00000570139	PMP2	P02689	132 aa		5.7	□□□□□ -1.5
CNOT1-222	ENST00000570139	ZNF735	P0CB33	412 aa		5.7	□□□□□ -1.5
CNOT1-222	ENST00000570139	PPIAL4F	P0DN26	164 aa		5.7	□□□□□ -1.5
CNOT1-222	ENST00000570139	OR5H8	P0DN80	308 aa		5.7	□□□□□ -1.5
CNOT1-222	ENST00000570139	PSG2	P11465	335 aa		5.7	□□□□□ -1.5
CNOT1-222	ENST00000570139	CCL8	P80075	99 aa		5.7	□□□□□ -1.5
CNOT1-222	ENST00000570139	TLE4	Q04727	773 aa		5.7	□□□□□ -1.5
CNOT1-222	ENST00000570139	ZNF826P	Q6ZT77	177 aa		5.7	□□□□□ -1.5
CNOT1-222	ENST00000570139	C9orf139	Q6ZV77	190 aa		5.7	□□□□□ -1.5
CNOT1-222	ENST00000570139	SLC36A1	Q7Z2H8	476 aa		5.7	□□□□□ -1.5
CNOT1-222	ENST00000570139	AKAP14	Q86UN6	197 aa		5.7	□□□□□ -1.5
CNOT1-222	ENST00000570139	ANGPTL6	Q8NI99	470 aa		5.7	□□□□□ -1.5
CNOT1-222	ENST00000570139	GIMAP1	Q8WWP7	306 aa		5.7	□□□□□ -1.5
CNOT1-222	ENST00000570139	RDH5	Q92781	318 aa		5.7	□□□□□ -1.5
CNOT1-222	ENST00000570139	COQ2	Q96H96	371 aa		5.7	□□□□□ -1.5
CNOT1-222	ENST00000570139	SLC6A7	Q99884	636 aa		5.7	□□□□□ -1.5
CNOT1-222	ENST00000570139	CABLES2	Q9BTV7	478 aa		5.7	□□□□□ -1.5
CNOT1-222	ENST00000570139	TMEM106B	Q9NUM4	274 aa		5.7	□□□□□ -1.5
CNOT1-222	ENST00000570139	PIPOX	Q9P0Z9	390 aa		5.7	□□□□□ -1.5
CNOT1-222	ENST00000570139	ZNF222	Q9UK12	451 aa		5.7	□□□□□ -1.5
CNOT1-222	ENST00000570139	TRAPPC2L	Q9UL33	140 aa		5.7	□□□□□ -1.5
CNOT1-222	ENST00000570139	C14orf166	Q9Y224	244 aa	Known RBP	5.7	□□□□□ -1.5
CNOT1-222	ENST00000570139	PPIAL4A	Q9Y536	164 aa		5.7	□□□□□ -1.5
CNOT1-222	ENST00000570139	FLNB	O75369	2602 aa	Known RBP	5.7	□□□□□ -1.5
CNOT1-222	ENST00000570139	COL6A6	A6NMZ7	2263 aa		5.69	□□□□□ -1.5
CNOT1-222	ENST00000570139	ESPL1	Q14674	2120 aa		5.69	□□□□□ -1.5
CNOT1-222	ENST00000570139	IGHV4-4	A0A075B6R2	117 aa		5.69	□□□□□ -1.5
CNOT1-222	ENST00000570139	IGKV1D-17	A0A075B6S4	117 aa		5.69	□□□□□ -1.5
CNOT1-222	ENST00000570139	MFSD2B	A6NFX1	497 aa		5.69	□□□□□ -1.5
CNOT1-222	ENST00000570139		K7N7A8	449 aa		5.69	□□□□□ -1.5
CNOT1-222	ENST00000570139	TNFSF12	O43508	249 aa		5.69	□□□□□ -1.5
CNOT1-222	ENST00000570139	ZNF737	O75373	536 aa		5.69	□□□□□ -1.5
CNOT1-222	ENST00000570139	GZMH	P20718	246 aa		5.69	□□□□□ -1.5
CNOT1-222	ENST00000570139	S100G	P29377	79 aa		5.69	□□□□□ -1.5
CNOT1-222	ENST00000570139	GABRA2	P47869	451 aa		5.69	□□□□□ -1.5
CNOT1-222	ENST00000570139	PAX9	P55771	341 aa		5.69	□□□□□ -1.5
CNOT1-222	ENST00000570139	RRAS2	P62070	204 aa	Predicted RBP	5.69	□□□□□ -1.5
CNOT1-222	ENST00000570139	ATXN7L3	Q14CW9	347 aa	Predicted RBP	5.69	□□□□□ -1.5
CNOT1-222	ENST00000570139	HMGN3	Q15651	99 aa		5.69	□□□□□ -1.5
CNOT1-222	ENST00000570139	C11orf71	Q6IPW1	123 aa		5.69	□□□□□ -1.5
CNOT1-222	ENST00000570139	FAAP20	Q6NZ36	180 aa		5.69	□□□□□ -1.5
CNOT1-222	ENST00000570139	PRSS57	Q6UWY2	283 aa		5.69	□□□□□ -1.5
CNOT1-222	ENST00000570139	SLC25A42	Q86VD7	318 aa		5.69	□□□□□ -1.5
CNOT1-222	ENST00000570139	SLC38A6	Q8IZM9	456 aa		5.69	□□□□□ -1.5
CNOT1-222	ENST00000570139	ZNF565	Q8N9K5	539 aa		5.69	□□□□□ -1.5
CNOT1-222	ENST00000570139	ASCC1	Q8N9N2	400 aa	Known RBP	5.69	□□□□□ -1.5
CNOT1-222	ENST00000570139	CCDC71L	Q8N9Z2	235 aa		5.69	□□□□□ -1.5
CNOT1-222	ENST00000570139	OR13C8	Q8NGS7	320 aa		5.69	□□□□□ -1.5
CNOT1-222	ENST00000570139	OR10J5	Q8NHC4	309 aa		5.69	□□□□□ -1.5
CNOT1-222	ENST00000570139	TIMD4	Q96H15	378 aa		5.69	□□□□□ -1.5
CNOT1-222	ENST00000570139	HDHD3	Q9BSH5	251 aa	Predicted RBP	5.69	□□□□□ -1.5
CNOT1-222	ENST00000570139	WDR13	Q9H1Z4	485 aa		5.69	□□□□□ -1.5
CNOT1-222	ENST00000570139	MED28	Q9H204	178 aa		5.69	□□□□□ -1.5
CNOT1-222	ENST00000570139	OR51J1	Q9H342	316 aa		5.69	□□□□□ -1.5
CNOT1-222	ENST00000570139	ZFP57	Q9NU63	452 aa		5.69	□□□□□ -1.5
CNOT1-222	ENST00000570139	KAAG1	Q9UBP8	84 aa		5.69	□□□□□ -1.5
CNOT1-222	ENST00000570139	ZNF230	Q9UIE0	474 aa	Predicted RBP	5.69	□□□□□ -1.5
CNOT1-222	ENST00000570139	ALG5	Q9Y673	324 aa		5.69	□□□□□ -1.5
CNOT1-222	ENST00000570139	RAI1	Q7Z5J4	1906 aa	Predicted RBP	5.68	□□□□□ -1.5
CNOT1-222	ENST00000570139	ANKHD1	Q8IWZ3	2542 aa	Known RBP	5.68	□□□□□ -1.5
CNOT1-222	ENST00000570139	TRAV26-1	A0A087WT03	109 aa		5.68	□□□□□ -1.5
CNOT1-222	ENST00000570139	MEIKIN	A0A087WXM9	373 aa		5.68	□□□□□ -1.5
CNOT1-222	ENST00000570139	TRBV6-7	A0A0A0MS04	114 aa		5.68	□□□□□ -1.5
CNOT1-222	ENST00000570139	FAM172BP	A6NC97	362 aa		5.68	□□□□□ -1.5
CNOT1-222	ENST00000570139	SMIM1	B2RUZ4	78 aa		5.68	□□□□□ -1.5
CNOT1-222	ENST00000570139	SSNA1	O43805	119 aa		5.68	□□□□□ -1.5
CNOT1-222	ENST00000570139	SNAPC5	O75971	98 aa		5.68	□□□□□ -1.5
CNOT1-222	ENST00000570139	SLC22A5	O76082	557 aa		5.68	□□□□□ -1.5
CNOT1-222	ENST00000570139	PPY	P01298	95 aa		5.68	□□□□□ -1.5
CNOT1-222	ENST00000570139	CTSD	P07339	412 aa	Predicted RBP	5.68	□□□□□ -1.5
CNOT1-222	ENST00000570139	ANXA3	P12429	323 aa		5.68	□□□□□ -1.5
CNOT1-222	ENST00000570139	ZBTB25	P24278	435 aa		5.68	□□□□□ -1.5
CNOT1-222	ENST00000570139	MEF2C	Q06413	473 aa	Predicted RBP	5.68	□□□□□ -1.5
CNOT1-222	ENST00000570139	MSMO1	Q15800	293 aa		5.68	□□□□□ -1.5
CNOT1-222	ENST00000570139	TMEM128	Q5BJH2	165 aa		5.68	□□□□□ -1.5
CNOT1-222	ENST00000570139	AADACL3	Q5VUY0	350 aa		5.68	□□□□□ -1.5
CNOT1-222	ENST00000570139	ZNF660	Q6AZW8	331 aa	Predicted RBP	5.68	□□□□□ -1.5
CNOT1-222	ENST00000570139	SPSB3	Q6PJ21	355 aa		5.68	□□□□□ -1.5
CNOT1-222	ENST00000570139	ATRAID	Q6UW56	229 aa		5.68	□□□□□ -1.5
CNOT1-222	ENST00000570139	SPIC	Q8N5J4	248 aa		5.68	□□□□□ -1.5
CNOT1-222	ENST00000570139	CD177	Q8N6Q3	437 aa		5.68	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms