RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 PPIAL4AQ9Y536 164 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 LINC00312Q9Y6C7 94 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 X6R8D5 127 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 CACNA1DQ01668 2161 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 ACACAQ13085 2346 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 SMG1Q96Q15 3661 aaKnown RBP4.42□□□□□ -1.7
SF3B3-213ENST00000569687 ARID1AO14497 2285 aa4.42□□□□□ -1.7
SF3B3-213ENST00000569687 NKX6-3A6NJ46 265 aa4.42□□□□□ -1.7
SF3B3-213ENST00000569687 MARCH11A6NNE9 402 aa4.42□□□□□ -1.7
SF3B3-213ENST00000569687 M0R1X1 148 aa4.42□□□□□ -1.7
SF3B3-213ENST00000569687 AGPAT2O15120 278 aa4.42□□□□□ -1.7
SF3B3-213ENST00000569687 FCGR3BO75015 233 aa4.42□□□□□ -1.7
SF3B3-213ENST00000569687 C1QL1O75973 258 aa4.42□□□□□ -1.7
SF3B3-213ENST00000569687 MBP02144 154 aa4.42□□□□□ -1.7
SF3B3-213ENST00000569687 GYPAP02724 150 aa4.42□□□□□ -1.7
SF3B3-213ENST00000569687 METTL15P1P0C7V9 234 aa4.42□□□□□ -1.7
SF3B3-213ENST00000569687 IAPPP10997 89 aa4.42□□□□□ -1.7
SF3B3-213ENST00000569687 IGF2RP11717 2491 aa4.42□□□□□ -1.7
SF3B3-213ENST00000569687 CHRNB4P30926 498 aa4.42□□□□□ -1.7
SF3B3-213ENST00000569687 ADMP35318 185 aa4.42□□□□□ -1.7
SF3B3-213ENST00000569687 VDAC2P45880 294 aaPredicted RBP4.42□□□□□ -1.7
SF3B3-213ENST00000569687 EDDM3BP56851 147 aa4.42□□□□□ -1.7
SF3B3-213ENST00000569687 LINC00205P59089 165 aa4.42□□□□□ -1.7
SF3B3-213ENST00000569687 HSPE1P61604 102 aaKnown RBP4.42□□□□□ -1.7
SF3B3-213ENST00000569687 RPP30P78346 268 aaKnown RBP4.42□□□□□ -1.7
SF3B3-213ENST00000569687 CCL8P80075 99 aa4.42□□□□□ -1.7
SF3B3-213ENST00000569687 TLE1Q04724 770 aa4.42□□□□□ -1.7
SF3B3-213ENST00000569687 SLC38A11Q08AI6 406 aa4.42□□□□□ -1.7
SF3B3-213ENST00000569687 ZNF616Q08AN1 781 aa4.42□□□□□ -1.7
SF3B3-213ENST00000569687 TMEM267Q0VDI3 215 aaPredicted RBP4.42□□□□□ -1.7
SF3B3-213ENST00000569687 LY6DQ14210 128 aa4.42□□□□□ -1.7
SF3B3-213ENST00000569687 ITPR1Q14643 2758 aa4.42□□□□□ -1.7
SF3B3-213ENST00000569687 TMEM249Q2WGJ8 235 aa4.42□□□□□ -1.7
SF3B3-213ENST00000569687 KHDC3LQ587J8 217 aa4.42□□□□□ -1.7
SF3B3-213ENST00000569687 ZNF506Q5JVG8 444 aa4.42□□□□□ -1.7
SF3B3-213ENST00000569687 BTNL3Q6UXE8 466 aa4.42□□□□□ -1.7
SF3B3-213ENST00000569687 HEPN1Q6WQI6 88 aa4.42□□□□□ -1.7
SF3B3-213ENST00000569687 SLC25A48Q6ZT89 311 aaKnown RBP4.42□□□□□ -1.7
SF3B3-213ENST00000569687 LINC00311Q8N616 119 aa4.42□□□□□ -1.7
SF3B3-213ENST00000569687 DEFB108BQ8NET1 73 aa4.42□□□□□ -1.7
SF3B3-213ENST00000569687 OR10P1Q8NGE3 313 aa4.42□□□□□ -1.7
SF3B3-213ENST00000569687 OR4A16Q8NH70 328 aa4.42□□□□□ -1.7
SF3B3-213ENST00000569687 OR4S2Q8NH73 311 aa4.42□□□□□ -1.7
SF3B3-213ENST00000569687 DTD1Q8TEA8 209 aa4.42□□□□□ -1.7
SF3B3-213ENST00000569687 RAX2Q96IS3 184 aa4.42□□□□□ -1.7
SF3B3-213ENST00000569687 TMEM147Q9BVK8 224 aa4.42□□□□□ -1.7
SF3B3-213ENST00000569687 GAL3ST2Q9H3Q3 398 aa4.42□□□□□ -1.7
SF3B3-213ENST00000569687 TMEM231Q9H6L2 316 aa4.42□□□□□ -1.7
SF3B3-213ENST00000569687 UNKLQ9H9P5 680 aaKnown RBP4.42□□□□□ -1.7
SF3B3-213ENST00000569687 RPRMQ9NS64 109 aa4.42□□□□□ -1.7
SF3B3-213ENST00000569687 TMEM106BQ9NUM4 274 aa4.42□□□□□ -1.7
SF3B3-213ENST00000569687 PTPRQQ9UMZ3 2332 aa4.42□□□□□ -1.7
SF3B3-213ENST00000569687 RFNGQ9Y644 331 aa4.42□□□□□ -1.7
SF3B3-213ENST00000569687 U3KQE9 123 aa4.42□□□□□ -1.7
SF3B3-213ENST00000569687 NCOR2Q9Y618 2525 aa4.42□□□□□ -1.7
SF3B3-213ENST00000569687 KIAA2026Q5HYC2 2103 aa4.42□□□□□ -1.7
SF3B3-213ENST00000569687 NBEAQ8NFP9 2946 aa4.42□□□□□ -1.7
SF3B3-213ENST00000569687 SVILO95425 2214 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 CADP27708 2225 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 A0A087X0M5 115 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 TRGV8A0A0C4DH27 118 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 A0A1B0GX30 115 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 FAM74A7A6NL05 159 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 FAM90A27PA6NNH2 459 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 CEBPZOSA8MTT3 80 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 H3BP45 60 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 H3BS24 57 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 TSPAN4O14817 238 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 SLC31A2O15432 143 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 NDUFB3O43676 98 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 NXPH3O95157 252 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 HRASP01112 189 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 HSPB1P04792 205 aaKnown RBP4.41□□□□□ -1.7
SF3B3-213ENST00000569687 ARG1P05089 322 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 SRP19P09132 144 aaKnown RBP4.41□□□□□ -1.7
SF3B3-213ENST00000569687 OR9G9P0C7N8 305 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 CT45A6P0DMU7 189 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 CT45A5P0DMU8 189 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 CT45A7P0DMV0 189 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 SELLP14151 372 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 DAOP14920 347 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 MAS1LP35410 378 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 TAGLN2P37802 199 aaKnown RBP4.41□□□□□ -1.7
SF3B3-213ENST00000569687 NPBWR1P48145 328 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 DLX6P56179 175 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 LGALS4P56470 323 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 ERVK-16P61578 105 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 RUNX1Q01196 453 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 ICAM4Q14773 271 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 LTC4SQ16873 150 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 FAM74A3Q4VXF1 159 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 RPL39P5Q59GN2 51 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 TMEM41BQ5BJD5 291 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 OR2B11Q5JQS5 317 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 SOHLH1Q5JUK2 328 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 TMEM200BQ69YZ2 307 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 SLC25A24Q6NUK1 477 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 FAM71F2Q6NXP2 309 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 DUX4L9Q6RFH8 374 aaPredicted RBP4.41□□□□□ -1.7
SF3B3-213ENST00000569687 ZNF833PQ6ZTB9 187 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms