RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 C9orf152Q5JTZ5 239 aa7.45□□□□□ -1.22
UBR1-210ENST00000569337 HIST2H2BDQ6DRA6 164 aa7.45□□□□□ -1.22
UBR1-210ENST00000569337 KCTD9Q7L273 389 aa7.45□□□□□ -1.22
UBR1-210ENST00000569337 CENPVQ7Z7K6 275 aaPredicted RBP7.45□□□□□ -1.22
UBR1-210ENST00000569337 SLC25A42Q86VD7 318 aa7.45□□□□□ -1.22
UBR1-210ENST00000569337 CMTM1Q8IZ96 169 aa7.45□□□□□ -1.22
UBR1-210ENST00000569337 Q8N6K4 173 aa7.45□□□□□ -1.22
UBR1-210ENST00000569337 TCTEX1D2Q8WW35 142 aa7.45□□□□□ -1.22
UBR1-210ENST00000569337 SCGB3A2Q96PL1 93 aa7.45□□□□□ -1.22
UBR1-210ENST00000569337 TP53RKQ96S44 253 aa7.45□□□□□ -1.22
UBR1-210ENST00000569337 WNT10AQ9GZT5 417 aa7.45□□□□□ -1.22
UBR1-210ENST00000569337 NAA60Q9H7X0 242 aa7.45□□□□□ -1.22
UBR1-210ENST00000569337 COPZ2Q9P299 210 aa7.45□□□□□ -1.22
UBR1-210ENST00000569337 MOB4Q9Y3A3 225 aa7.45□□□□□ -1.22
UBR1-210ENST00000569337 NUBP2Q9Y5Y2 271 aa7.45□□□□□ -1.22
UBR1-210ENST00000569337 A0A0B4J293 547 aa7.44□□□□□ -1.22
UBR1-210ENST00000569337 SH2D7A6NKC9 451 aaPredicted RBP7.44□□□□□ -1.22
UBR1-210ENST00000569337 SRRM4A7MD48 611 aaKnown RBP7.44□□□□□ -1.22
UBR1-210ENST00000569337 PTTG1O95997 202 aa7.44□□□□□ -1.22
UBR1-210ENST00000569337 IGKV1-39P01597 117 aa7.44□□□□□ -1.22
UBR1-210ENST00000569337 IGLV2-23P01705 113 aa7.44□□□□□ -1.22
UBR1-210ENST00000569337 IGKV1D-39P04432 117 aa7.44□□□□□ -1.22
UBR1-210ENST00000569337 H2AFB2P0C5Z0 115 aa7.44□□□□□ -1.22
UBR1-210ENST00000569337 OR5AC1P0C628 307 aa7.44□□□□□ -1.22
UBR1-210ENST00000569337 CD28P10747 220 aa7.44□□□□□ -1.22
UBR1-210ENST00000569337 CNTFRP26992 372 aa7.44□□□□□ -1.22
UBR1-210ENST00000569337 CD1BP29016 333 aa7.44□□□□□ -1.22
UBR1-210ENST00000569337 MECP2P51608 486 aaKnown RBP7.44□□□□□ -1.22
UBR1-210ENST00000569337 F2RL1P55085 397 aa7.44□□□□□ -1.22
UBR1-210ENST00000569337 EBI3Q14213 229 aa7.44□□□□□ -1.22
UBR1-210ENST00000569337 OXA1LQ15070 435 aa7.44□□□□□ -1.22
UBR1-210ENST00000569337 RGS21Q2M5E4 152 aa7.44□□□□□ -1.22
UBR1-210ENST00000569337 NSUN5P1Q3KNT7 163 aa7.44□□□□□ -1.22
UBR1-210ENST00000569337 SPAG16Q8N0X2 631 aa7.44□□□□□ -1.22
UBR1-210ENST00000569337 CENPSQ8N2Z9 138 aa7.44□□□□□ -1.22
UBR1-210ENST00000569337 CCDC71LQ8N9Z2 235 aa7.44□□□□□ -1.22
UBR1-210ENST00000569337 OR5AU1Q8NGC0 362 aa7.44□□□□□ -1.22
UBR1-210ENST00000569337 OR52B4Q8NGK2 314 aa7.44□□□□□ -1.22
UBR1-210ENST00000569337 LHFPL5Q8TAF8 219 aa7.44□□□□□ -1.22
UBR1-210ENST00000569337 GLYATL2Q8WU03 294 aa7.44□□□□□ -1.22
UBR1-210ENST00000569337 ADTRPQ96IZ2 230 aa7.44□□□□□ -1.22
UBR1-210ENST00000569337 EAF1Q96JC9 268 aaPredicted RBP7.44□□□□□ -1.22
UBR1-210ENST00000569337 MARVELD1Q9BSK0 173 aa7.44□□□□□ -1.22
UBR1-210ENST00000569337 PLSCR3Q9NRY6 295 aa7.44□□□□□ -1.22
UBR1-210ENST00000569337 SLC35D1Q9NTN3 355 aa7.44□□□□□ -1.22
UBR1-210ENST00000569337 WASHC3Q9Y3C0 194 aa7.44□□□□□ -1.22
UBR1-210ENST00000569337 TEX13DA0A0J9YY54 714 aaPredicted RBP7.43□□□□□ -1.22
UBR1-210ENST00000569337 C3orf85A0A1B0GTC6 90 aa7.43□□□□□ -1.22
UBR1-210ENST00000569337 INMT-MINDY4F8WBC2 141 aa7.43□□□□□ -1.22
UBR1-210ENST00000569337 H0Y980 276 aa7.43□□□□□ -1.22
UBR1-210ENST00000569337 H7C2Y5 167 aa7.43□□□□□ -1.22
UBR1-210ENST00000569337 S1PR2O95136 353 aa7.43□□□□□ -1.22
UBR1-210ENST00000569337 CRYZL1O95825 349 aa7.43□□□□□ -1.22
UBR1-210ENST00000569337 AMY1AP04745 511 aa7.43□□□□□ -1.22
UBR1-210ENST00000569337 OR4E1P0C645 316 aa7.43□□□□□ -1.22
UBR1-210ENST00000569337 MC5RP33032 325 aa7.43□□□□□ -1.22
UBR1-210ENST00000569337 LPAR6P43657 344 aa7.43□□□□□ -1.22
UBR1-210ENST00000569337 CATR1Q13166 79 aa7.43□□□□□ -1.22
UBR1-210ENST00000569337 TMEM187Q14656 261 aa7.43□□□□□ -1.22
UBR1-210ENST00000569337 ANKRD55Q3KP44 614 aa7.43□□□□□ -1.22
UBR1-210ENST00000569337 TMEM177Q53S58 311 aa7.43□□□□□ -1.22
UBR1-210ENST00000569337 TMEM128Q5BJH2 165 aa7.43□□□□□ -1.22
UBR1-210ENST00000569337 NDUFA11Q86Y39 141 aa7.43□□□□□ -1.22
UBR1-210ENST00000569337 PDPNQ86YL7 162 aa7.43□□□□□ -1.22
UBR1-210ENST00000569337 OR2T10Q8NGZ9 312 aa7.43□□□□□ -1.22
UBR1-210ENST00000569337 GALNT14Q96FL9 552 aa7.43□□□□□ -1.22
UBR1-210ENST00000569337 CITED2Q99967 270 aaPredicted RBP7.43□□□□□ -1.22
UBR1-210ENST00000569337 SEC22CQ9BRL7 303 aa7.43□□□□□ -1.22
UBR1-210ENST00000569337 ALX4Q9H161 411 aaPredicted RBP7.43□□□□□ -1.22
UBR1-210ENST00000569337 C9orf170A2RU37 121 aa7.42□□□□□ -1.22
UBR1-210ENST00000569337 NCBP2LA6PVI3 153 aaKnown RBP7.42□□□□□ -1.22
UBR1-210ENST00000569337 RBFOX2O43251 390 aaKnown RBP eCLIP7.42□□□□□ -1.22
UBR1-210ENST00000569337 FGF16O43320 207 aa7.42□□□□□ -1.22
UBR1-210ENST00000569337 SFT2D2O95562 160 aa7.42□□□□□ -1.22
UBR1-210ENST00000569337 MOSP00540 346 aa7.42□□□□□ -1.22
UBR1-210ENST00000569337 APOA2P02652 100 aa7.42□□□□□ -1.22
UBR1-210ENST00000569337 UCP1P25874 307 aa7.42□□□□□ -1.22
UBR1-210ENST00000569337 KIR2DS2P43631 304 aa7.42□□□□□ -1.22
UBR1-210ENST00000569337 TAS2R31P59538 309 aa7.42□□□□□ -1.22
UBR1-210ENST00000569337 UBE2MP61081 183 aaKnown RBP7.42□□□□□ -1.22
UBR1-210ENST00000569337 DEFA6Q01524 100 aa7.42□□□□□ -1.22
UBR1-210ENST00000569337 TAGLNQ01995 201 aaKnown RBP7.42□□□□□ -1.22
UBR1-210ENST00000569337 DHRS2Q13268 280 aa7.42□□□□□ -1.22
UBR1-210ENST00000569337 RTL8BQ17RB0 113 aa7.42□□□□□ -1.22
UBR1-210ENST00000569337 MRGPRG-AS1Q2M3A8 158 aa7.42□□□□□ -1.22
UBR1-210ENST00000569337 PLET1Q6UQ28 207 aa7.42□□□□□ -1.22
UBR1-210ENST00000569337 SGPP2Q8IWX5 399 aa7.42□□□□□ -1.22
UBR1-210ENST00000569337 SELENOHQ8IZQ5 122 aaKnown RBP7.42□□□□□ -1.22
UBR1-210ENST00000569337 VKORC1L1Q8N0U8 176 aa7.42□□□□□ -1.22
UBR1-210ENST00000569337 C5orf56Q8N8D9 126 aa7.42□□□□□ -1.22
UBR1-210ENST00000569337 OR4S2Q8NH73 311 aa7.42□□□□□ -1.22
UBR1-210ENST00000569337 WIPF2Q8TF74 440 aaPredicted RBP7.42□□□□□ -1.22
UBR1-210ENST00000569337 CHPT1Q8WUD6 406 aa7.42□□□□□ -1.22
UBR1-210ENST00000569337 FLYWCH2Q96CP2 140 aaKnown RBP7.42□□□□□ -1.22
UBR1-210ENST00000569337 R3HDM4Q96D70 268 aa7.42□□□□□ -1.22
UBR1-210ENST00000569337 TMEM222Q9H0R3 208 aa7.42□□□□□ -1.22
UBR1-210ENST00000569337 LIN7CQ9NUP9 197 aaKnown RBP7.42□□□□□ -1.22
UBR1-210ENST00000569337 PRELID3BQ9Y3B1 194 aa7.42□□□□□ -1.22
UBR1-210ENST00000569337 MGAM2Q2M2H8 2515 aa7.42□□□□□ -1.22
UBR1-210ENST00000569337 PKD1L1Q8TDX9 2849 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms