RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 LTC4SQ16873 150 aa6.4□□□□□ -1.38
CDH11-216ENST00000569128 ZNF57Q68EA5 555 aaPredicted RBP6.4□□□□□ -1.38
CDH11-216ENST00000569128 BEST4Q8NFU0 473 aa6.4□□□□□ -1.38
CDH11-216ENST00000569128 C15orf40Q8WUR7 153 aa6.4□□□□□ -1.38
CDH11-216ENST00000569128 ARL11Q969Q4 196 aa6.4□□□□□ -1.38
CDH11-216ENST00000569128 CXorf58Q96LI9 332 aa6.4□□□□□ -1.38
CDH11-216ENST00000569128 FOXC2Q99958 501 aa6.4□□□□□ -1.38
CDH11-216ENST00000569128 REG4Q9BYZ8 158 aa6.4□□□□□ -1.38
CDH11-216ENST00000569128 TAF9BQ9HBM6 251 aa6.4□□□□□ -1.38
CDH11-216ENST00000569128 RPUSD1Q9UJJ7 312 aaKnown RBP6.4□□□□□ -1.38
CDH11-216ENST00000569128 DSCAML1Q8TD84 2053 aa6.39□□□□□ -1.39
CDH11-216ENST00000569128 VPS13CQ709C8 3753 aa6.39□□□□□ -1.39
CDH11-216ENST00000569128 PPIAL4CA0A0B4J2A2 164 aa6.39□□□□□ -1.39
CDH11-216ENST00000569128 FAM172BPA6NC97 362 aa6.39□□□□□ -1.39
CDH11-216ENST00000569128 BOLA2-SMG1P6H3BVE0 249 aa6.39□□□□□ -1.39
CDH11-216ENST00000569128 FABP7O15540 132 aa6.39□□□□□ -1.39
CDH11-216ENST00000569128 IGHV3-7P01780 117 aa6.39□□□□□ -1.39
CDH11-216ENST00000569128 HBZP02008 142 aa6.39□□□□□ -1.39
CDH11-216ENST00000569128 ZNF735P0CB33 412 aa6.39□□□□□ -1.39
CDH11-216ENST00000569128 PPIAL4GP0DN37 164 aa6.39□□□□□ -1.39
CDH11-216ENST00000569128 RCVRNP35243 200 aa6.39□□□□□ -1.39
CDH11-216ENST00000569128 HRH1P35367 487 aa6.39□□□□□ -1.39
CDH11-216ENST00000569128 CBX5P45973 191 aa6.39□□□□□ -1.39
CDH11-216ENST00000569128 HLA-DRB3P79483 266 aa6.39□□□□□ -1.39
CDH11-216ENST00000569128 MRPS10P82664 201 aaKnown RBP6.39□□□□□ -1.39
CDH11-216ENST00000569128 PAX5Q02548 391 aa6.39□□□□□ -1.39
CDH11-216ENST00000569128 PAX2Q02962 417 aa6.39□□□□□ -1.39
CDH11-216ENST00000569128 GNMTQ14749 295 aa6.39□□□□□ -1.39
CDH11-216ENST00000569128 HMGN3Q15651 99 aa6.39□□□□□ -1.39
CDH11-216ENST00000569128 TATDN3Q17R31 274 aa6.39□□□□□ -1.39
CDH11-216ENST00000569128 PRAMEF5Q5TYX0 476 aa6.39□□□□□ -1.39
CDH11-216ENST00000569128 TRIQKQ629K1 86 aa6.39□□□□□ -1.39
CDH11-216ENST00000569128 PRSS57Q6UWY2 283 aa6.39□□□□□ -1.39
CDH11-216ENST00000569128 C11orf42Q8N5U0 333 aa6.39□□□□□ -1.39
CDH11-216ENST00000569128 TMEM229BQ8NBD8 167 aa6.39□□□□□ -1.39
CDH11-216ENST00000569128 LY6G5BQ8NDX9 201 aa6.39□□□□□ -1.39
CDH11-216ENST00000569128 SCARB1Q8WTV0 552 aa6.39□□□□□ -1.39
CDH11-216ENST00000569128 LEAP2Q969E1 77 aa6.39□□□□□ -1.39
CDH11-216ENST00000569128 BORCS5Q969J3 196 aa6.39□□□□□ -1.39
CDH11-216ENST00000569128 CCDC32Q9BV29 185 aa6.39□□□□□ -1.39
CDH11-216ENST00000569128 PARP12Q9H0J9 701 aaKnown RBP6.39□□□□□ -1.39
CDH11-216ENST00000569128 ZNF286AQ9HBT8 521 aa6.39□□□□□ -1.39
CDH11-216ENST00000569128 HRASLSQ9HDD0 168 aa6.39□□□□□ -1.39
CDH11-216ENST00000569128 CALYQ9NYX4 217 aa6.39□□□□□ -1.39
CDH11-216ENST00000569128 OR1A1Q9P1Q5 309 aa6.39□□□□□ -1.39
CDH11-216ENST00000569128 ANXA10Q9UJ72 324 aa6.39□□□□□ -1.39
CDH11-216ENST00000569128 TBC1D24Q9ULP9 559 aa6.39□□□□□ -1.39
CDH11-216ENST00000569128 NAV2Q8IVL1 2488 aa6.39□□□□□ -1.39
CDH11-216ENST00000569128 ITPR2Q14571 2701 aa6.39□□□□□ -1.39
CDH11-216ENST00000569128 YLPM1P49750 1951 aaKnown RBP6.38□□□□□ -1.39
CDH11-216ENST00000569128 DOCK11Q5JSL3 2073 aa6.38□□□□□ -1.39
CDH11-216ENST00000569128 IGLV5-52A0A0A0MRZ9 124 aa6.38□□□□□ -1.39
CDH11-216ENST00000569128 TRGV10A0A0A0MS01 117 aa6.38□□□□□ -1.39
CDH11-216ENST00000569128 hADV38S2A0JD32 116 aa6.38□□□□□ -1.39
CDH11-216ENST00000569128 FUOMA2VDF0 154 aa6.38□□□□□ -1.39
CDH11-216ENST00000569128 ZNF736B4DX44 427 aaPredicted RBP6.38□□□□□ -1.39
CDH11-216ENST00000569128 BET1O15155 118 aa6.38□□□□□ -1.39
CDH11-216ENST00000569128 NDUFA7O95182 113 aa6.38□□□□□ -1.39
CDH11-216ENST00000569128 RAB3DO95716 219 aa6.38□□□□□ -1.39
CDH11-216ENST00000569128 NFYAP23511 347 aaPredicted RBP6.38□□□□□ -1.39
CDH11-216ENST00000569128 LINC00205P59089 165 aa6.38□□□□□ -1.39
CDH11-216ENST00000569128 ARF6P62330 175 aa6.38□□□□□ -1.39
CDH11-216ENST00000569128 RELQ04864 619 aaPredicted RBP6.38□□□□□ -1.39
CDH11-216ENST00000569128 MEF2CQ06413 473 aaPredicted RBP6.38□□□□□ -1.39
CDH11-216ENST00000569128 LOXL1Q08397 574 aaPredicted RBP6.38□□□□□ -1.39
CDH11-216ENST00000569128 MEF2DQ14814 521 aa6.38□□□□□ -1.39
CDH11-216ENST00000569128 STEAP1BQ6NZ63 245 aa6.38□□□□□ -1.39
CDH11-216ENST00000569128 C16orf87Q6PH81 154 aa6.38□□□□□ -1.39
CDH11-216ENST00000569128 DHRS11Q6UWP2 260 aa6.38□□□□□ -1.39
CDH11-216ENST00000569128 Q6ZS49 121 aa6.38□□□□□ -1.39
CDH11-216ENST00000569128 TOMM5Q8N4H5 51 aa6.38□□□□□ -1.39
CDH11-216ENST00000569128 Q8N7P7 452 aa6.38□□□□□ -1.39
CDH11-216ENST00000569128 OR10V1Q8NGI7 309 aa6.38□□□□□ -1.39
CDH11-216ENST00000569128 OR4C16Q8NGL9 310 aa6.38□□□□□ -1.39
CDH11-216ENST00000569128 OR56B4Q8NH76 319 aa6.38□□□□□ -1.39
CDH11-216ENST00000569128 C8orf46Q8TAG6 207 aa6.38□□□□□ -1.39
CDH11-216ENST00000569128 IL1F10Q8WWZ1 152 aa6.38□□□□□ -1.39
CDH11-216ENST00000569128 CREB3L1Q96BA8 519 aa6.38□□□□□ -1.39
CDH11-216ENST00000569128 SLC6A7Q99884 636 aa6.38□□□□□ -1.39
CDH11-216ENST00000569128 IDI2-AS1Q9NZ38 188 aa6.38□□□□□ -1.39
CDH11-216ENST00000569128 KCNIP1Q9NZI2 227 aa6.38□□□□□ -1.39
CDH11-216ENST00000569128 ONECUT1Q9UBC0 465 aa6.38□□□□□ -1.39
CDH11-216ENST00000569128 KCNS2Q9ULS6 477 aa6.38□□□□□ -1.39
CDH11-216ENST00000569128 LINC00312Q9Y6C7 94 aa6.38□□□□□ -1.39
CDH11-216ENST00000569128 CR1P17927 2039 aa6.38□□□□□ -1.39
CDH11-216ENST00000569128 ABCA2Q9BZC7 2435 aa6.38□□□□□ -1.39
CDH11-216ENST00000569128 CSMD1Q96PZ7 3565 aa6.38□□□□□ -1.39
CDH11-216ENST00000569128 AKAP9Q99996 3911 aa6.37□□□□□ -1.39
CDH11-216ENST00000569128 BAHCC1Q9P281 2608 aa6.37□□□□□ -1.39
CDH11-216ENST00000569128 IGHV2-70DA0A0C4DH43 119 aa6.37□□□□□ -1.39
CDH11-216ENST00000569128 KBTBD11-OT1A0A1B0GTJ5 212 aa6.37□□□□□ -1.39
CDH11-216ENST00000569128 A0A1W2PPE3 182 aa6.37□□□□□ -1.39
CDH11-216ENST00000569128 RNF222A6NCQ9 220 aa6.37□□□□□ -1.39
CDH11-216ENST00000569128 MFSD2BA6NFX1 497 aa6.37□□□□□ -1.39
CDH11-216ENST00000569128 ZNF729A6NN14 1252 aaPredicted RBP6.37□□□□□ -1.39
CDH11-216ENST00000569128 A8MXK9 166 aa6.37□□□□□ -1.39
CDH11-216ENST00000569128 ECDO95905 644 aaPredicted RBP6.37□□□□□ -1.39
CDH11-216ENST00000569128 CD74P04233 296 aa6.37□□□□□ -1.39
CDH11-216ENST00000569128 AKAIN1P0CW23 69 aa6.37□□□□□ -1.39
CDH11-216ENST00000569128 ZNF728P0DKX0 622 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms