RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 TTTY10Q9BZA0 68 aa8.64□□□□□ -1.03
CDH3-208ENST00000569036 PARP11Q9NR21 331 aa8.64□□□□□ -1.03
CDH3-208ENST00000569036 RCC2Q9P258 522 aaKnown RBP8.64□□□□□ -1.03
CDH3-208ENST00000569036 METTL1Q9UBP6 276 aaKnown RBP8.64□□□□□ -1.03
CDH3-208ENST00000569036 RHBDD3Q9Y3P4 386 aa8.64□□□□□ -1.03
CDH3-208ENST00000569036 PCP4L1A6NKN8 68 aa8.63□□□□□ -1.03
CDH3-208ENST00000569036 WRBO00258 174 aa8.63□□□□□ -1.03
CDH3-208ENST00000569036 DCTN6O00399 190 aa8.63□□□□□ -1.03
CDH3-208ENST00000569036 XRCC2O43543 280 aa8.63□□□□□ -1.03
CDH3-208ENST00000569036 MT-ND4LP03901 98 aa8.63□□□□□ -1.03
CDH3-208ENST00000569036 S100A6P06703 90 aa8.63□□□□□ -1.03
CDH3-208ENST00000569036 CRABP1P29762 137 aa8.63□□□□□ -1.03
CDH3-208ENST00000569036 RPL35P42766 123 aaKnown RBP8.63□□□□□ -1.03
CDH3-208ENST00000569036 F2RL1P55085 397 aa8.63□□□□□ -1.03
CDH3-208ENST00000569036 GNB1P62873 340 aa8.63□□□□□ -1.03
CDH3-208ENST00000569036 PDZK1IP1Q13113 114 aa8.63□□□□□ -1.03
CDH3-208ENST00000569036 TMEM128Q5BJH2 165 aa8.63□□□□□ -1.03
CDH3-208ENST00000569036 TCF23Q7RTU1 214 aa8.63□□□□□ -1.03
CDH3-208ENST00000569036 ZNF511Q8NB15 262 aa8.63□□□□□ -1.03
CDH3-208ENST00000569036 OR2AJ1Q8NGZ0 328 aa8.63□□□□□ -1.03
CDH3-208ENST00000569036 DLX4Q92988 240 aaPredicted RBP8.63□□□□□ -1.03
CDH3-208ENST00000569036 MOB1AQ9H8S9 216 aa8.63□□□□□ -1.03
CDH3-208ENST00000569036 GNB4Q9HAV0 340 aa8.63□□□□□ -1.03
CDH3-208ENST00000569036 KLHDC2Q9Y2U9 406 aa8.63□□□□□ -1.03
CDH3-208ENST00000569036 R4GMQ9 66 aa8.63□□□□□ -1.03
CDH3-208ENST00000569036 AP4M1O00189 453 aa8.62□□□□□ -1.03
CDH3-208ENST00000569036 CA11O75493 328 aa8.62□□□□□ -1.03
CDH3-208ENST00000569036 TK1P04183 234 aa8.62□□□□□ -1.03
CDH3-208ENST00000569036 CD5P06127 495 aa8.62□□□□□ -1.03
CDH3-208ENST00000569036 ADCYAP1P18509 176 aa8.62□□□□□ -1.03
CDH3-208ENST00000569036 ATP1B3P54709 279 aa8.62□□□□□ -1.03
CDH3-208ENST00000569036 CD81P60033 236 aa8.62□□□□□ -1.03
CDH3-208ENST00000569036 PPP1R1AQ13522 171 aa8.62□□□□□ -1.03
CDH3-208ENST00000569036 FAM76BQ5HYJ3 339 aa8.62□□□□□ -1.03
CDH3-208ENST00000569036 FAM74A1Q5RGS3 127 aa8.62□□□□□ -1.03
CDH3-208ENST00000569036 HOGA1Q86XE5 327 aa8.62□□□□□ -1.03
CDH3-208ENST00000569036 ZNRF4Q8WWF5 429 aa8.62□□□□□ -1.03
CDH3-208ENST00000569036 ARPC1AQ92747 370 aa8.62□□□□□ -1.03
CDH3-208ENST00000569036 ZNF714Q96N38 554 aa8.62□□□□□ -1.03
CDH3-208ENST00000569036 TINAGL1Q9GZM7 467 aaPredicted RBP8.62□□□□□ -1.03
CDH3-208ENST00000569036 CHST6Q9GZX3 395 aa8.62□□□□□ -1.03
CDH3-208ENST00000569036 TMEM133Q9H2Q1 129 aa8.62□□□□□ -1.03
CDH3-208ENST00000569036 OR51M1Q9H341 326 aa8.62□□□□□ -1.03
CDH3-208ENST00000569036 SEBOXQ9HB31 216 aaPredicted RBP8.62□□□□□ -1.03
CDH3-208ENST00000569036 TREM1Q9NP99 234 aa8.62□□□□□ -1.03
CDH3-208ENST00000569036 GTF2A1LQ9UNN4 478 aa8.62□□□□□ -1.03
CDH3-208ENST00000569036 VSIG4Q9Y279 399 aa8.62□□□□□ -1.03
CDH3-208ENST00000569036 hCG_38984A0A1B0GV85 526 aa8.61□□□□□ -1.03
CDH3-208ENST00000569036 C5orf52A6NGY3 159 aa8.61□□□□□ -1.03
CDH3-208ENST00000569036 IGHG4P01861 327 aa8.61□□□□□ -1.03
CDH3-208ENST00000569036 OR8U9P0C7N5 309 aa8.61□□□□□ -1.03
CDH3-208ENST00000569036 FAM106CPP0CH98 169 aa8.61□□□□□ -1.03
CDH3-208ENST00000569036 SPP1P10451 314 aa8.61□□□□□ -1.03
CDH3-208ENST00000569036 PTHLHP12272 177 aa8.61□□□□□ -1.03
CDH3-208ENST00000569036 RCC1P18754 421 aaPredicted RBP8.61□□□□□ -1.03
CDH3-208ENST00000569036 PRDX2P32119 198 aa8.61□□□□□ -1.03
CDH3-208ENST00000569036 MAS1LP35410 378 aa8.61□□□□□ -1.03
CDH3-208ENST00000569036 SULT1A2P50226 295 aa8.61□□□□□ -1.03
CDH3-208ENST00000569036 RAB5CP51148 216 aa8.61□□□□□ -1.03
CDH3-208ENST00000569036 RUNX1Q01196 453 aa8.61□□□□□ -1.03
CDH3-208ENST00000569036 RHEBQ15382 184 aa8.61□□□□□ -1.03
CDH3-208ENST00000569036 LYPD6BQ8NI32 183 aa8.61□□□□□ -1.03
CDH3-208ENST00000569036 MYOZ3Q8TDC0 251 aa8.61□□□□□ -1.03
CDH3-208ENST00000569036 HPSE2Q8WWQ2 592 aa8.61□□□□□ -1.03
CDH3-208ENST00000569036 OR5P3Q8WZ94 311 aa8.61□□□□□ -1.03
CDH3-208ENST00000569036 CST11Q9H112 138 aa8.61□□□□□ -1.03
CDH3-208ENST00000569036 RHOFQ9HBH0 211 aa8.61□□□□□ -1.03
CDH3-208ENST00000569036 CYTL1Q9NRR1 136 aa8.61□□□□□ -1.03
CDH3-208ENST00000569036 KLK5Q9Y337 293 aaPredicted RBP8.61□□□□□ -1.03
CDH3-208ENST00000569036 A0A1B0GW64 132 aa8.6□□□□□ -1.03
CDH3-208ENST00000569036 FAM90A18PA6NE21 464 aa8.6□□□□□ -1.03
CDH3-208ENST00000569036 FAM90A16PA6NEW6 464 aa8.6□□□□□ -1.03
CDH3-208ENST00000569036 FAM90A20PA6NIJ5 464 aa8.6□□□□□ -1.03
CDH3-208ENST00000569036 FAM90A9PA6NNJ1 464 aa8.6□□□□□ -1.03
CDH3-208ENST00000569036 COLCA2A8K830 154 aa8.6□□□□□ -1.03
CDH3-208ENST00000569036 FAM90A12PA8MX19 464 aa8.6□□□□□ -1.03
CDH3-208ENST00000569036 FAM90A5PA8MXJ8 464 aa8.6□□□□□ -1.03
CDH3-208ENST00000569036 SRSF10O75494 262 aaKnown RBP8.6□□□□□ -1.03
CDH3-208ENST00000569036 SFT2D2O95562 160 aa8.6□□□□□ -1.03
CDH3-208ENST00000569036 CST4P01036 141 aa8.6□□□□□ -1.03
CDH3-208ENST00000569036 FAM90A15PP0C7V4 464 aa8.6□□□□□ -1.03
CDH3-208ENST00000569036 FAM90A13PP0C7W8 464 aa8.6□□□□□ -1.03
CDH3-208ENST00000569036 FAM90A14PP0C7W9 464 aa8.6□□□□□ -1.03
CDH3-208ENST00000569036 FAM90A24PP0C7X0 464 aa8.6□□□□□ -1.03
CDH3-208ENST00000569036 PGAM2P15259 253 aa8.6□□□□□ -1.03
CDH3-208ENST00000569036 PSMB8P28062 276 aa8.6□□□□□ -1.03
CDH3-208ENST00000569036 SLURP1P55000 103 aa8.6□□□□□ -1.03
CDH3-208ENST00000569036 CFHR3Q02985 330 aa8.6□□□□□ -1.03
CDH3-208ENST00000569036 PRDX4Q13162 271 aa8.6□□□□□ -1.03
CDH3-208ENST00000569036 SMCO1Q147U7 214 aa8.6□□□□□ -1.03
CDH3-208ENST00000569036 TPTE2P1Q5T6R2 138 aa8.6□□□□□ -1.03
CDH3-208ENST00000569036 FAM53AQ6NSI3 398 aaPredicted RBP8.6□□□□□ -1.03
CDH3-208ENST00000569036 LINC00322Q6ZN03 302 aaPredicted RBP8.6□□□□□ -1.03
CDH3-208ENST00000569036 TRAPPC6BQ86SZ2 158 aa8.6□□□□□ -1.03
CDH3-208ENST00000569036 MAPKAPK5-AS1Q8N8E1 139 aa8.6□□□□□ -1.03
CDH3-208ENST00000569036 LFNGQ8NES3 379 aa8.6□□□□□ -1.03
CDH3-208ENST00000569036 OR4A4PQ8NGN8 299 aa8.6□□□□□ -1.03
CDH3-208ENST00000569036 TERB2Q8NHR7 220 aa8.6□□□□□ -1.03
CDH3-208ENST00000569036 RXFP4Q8TDU9 374 aa8.6□□□□□ -1.03
CDH3-208ENST00000569036 TCTEX1D2Q8WW35 142 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms