RNA–Protein interactions for RNA: ENST00000568548.5

VAC14-210, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,945 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-210ENST00000568548 A0A1W2PPV4 95 aa14.29□□□□□ -0.12
VAC14-210ENST00000568548 MYOD1P15172 320 aa14.29□□□□□ -0.12
VAC14-210ENST00000568548 GCH1P30793 250 aa14.29□□□□□ -0.12
VAC14-210ENST00000568548 TMEM147Q9BVK8 224 aa14.29□□□□□ -0.12
VAC14-210ENST00000568548 IGHV3OR15-7A0A075B7D8 119 aa14.29□□□□□ -0.12
VAC14-210ENST00000568548 DVL1O14640 695 aa14.29□□□□□ -0.12
VAC14-210ENST00000568548 MLNRO43193 412 aa14.29□□□□□ -0.12
VAC14-210ENST00000568548 SRSF6Q13247 344 aaKnown RBP14.29□□□□□ -0.12
VAC14-210ENST00000568548 ZNF705AQ6ZN79 300 aaPredicted RBP14.29□□□□□ -0.12
VAC14-210ENST00000568548 SGMS2Q8NHU3 365 aa14.29□□□□□ -0.12
VAC14-210ENST00000568548 TMEM18Q96B42 140 aa14.29□□□□□ -0.12
VAC14-210ENST00000568548 FAM122AQ96E09 287 aa14.29□□□□□ -0.12
VAC14-210ENST00000568548 MRPS18CQ9Y3D5 142 aaKnown RBP14.29□□□□□ -0.12
VAC14-210ENST00000568548 OR9G9P0C7N8 305 aa14.28□□□□□ -0.12
VAC14-210ENST00000568548 KLF14Q8TD94 323 aaPredicted RBP14.28□□□□□ -0.12
VAC14-210ENST00000568548 ABI3Q9P2A4 366 aa14.28□□□□□ -0.12
VAC14-210ENST00000568548 HSPB7Q9UBY9 170 aa14.28□□□□□ -0.12
VAC14-210ENST00000568548 SLC17A3O00476 420 aa14.28□□□□□ -0.12
VAC14-210ENST00000568548 GNB1P62873 340 aa14.28□□□□□ -0.12
VAC14-210ENST00000568548 SLC35B1P78383 322 aa14.28□□□□□ -0.12
VAC14-210ENST00000568548 MSMO1Q15800 293 aa14.28□□□□□ -0.12
VAC14-210ENST00000568548 RPL39P5Q59GN2 51 aa14.28□□□□□ -0.12
VAC14-210ENST00000568548 FAM201AQ5SY85 155 aa14.28□□□□□ -0.12
VAC14-210ENST00000568548 ZNF645Q8N7E2 425 aa14.28□□□□□ -0.12
VAC14-210ENST00000568548 HCFC1P51610 2035 aa14.28□□□□□ -0.12
VAC14-210ENST00000568548 ZNF318Q5VUA4 2279 aa14.28□□□□□ -0.12
VAC14-210ENST00000568548 AQP7O14520 342 aa14.28□□□□□ -0.12
VAC14-210ENST00000568548 RRHO14718 337 aa14.28□□□□□ -0.12
VAC14-210ENST00000568548 SP1P08047 785 aa14.28□□□□□ -0.12
VAC14-210ENST00000568548 MIC13Q5XKP0 118 aa14.28□□□□□ -0.12
VAC14-210ENST00000568548 PKIBQ9C010 78 aa14.28□□□□□ -0.12
VAC14-210ENST00000568548 OTOGLQ3ZCN5 2332 aa14.28□□□□□ -0.12
VAC14-210ENST00000568548 NBASA2RRP1 2371 aa14.27□□□□□ -0.12
VAC14-210ENST00000568548 TRBV6-6A0A0A6YYG2 114 aa14.27□□□□□ -0.12
VAC14-210ENST00000568548 MARCH11A6NNE9 402 aa14.27□□□□□ -0.12
VAC14-210ENST00000568548 RBFOX2O43251 390 aaKnown RBP eCLIP14.27□□□□□ -0.122e-7■■■■□ 22.2
VAC14-210ENST00000568548 IGHV1-2P23083 117 aa14.27□□□□□ -0.12
VAC14-210ENST00000568548 CNN1P51911 297 aaKnown RBP14.27□□□□□ -0.12
VAC14-210ENST00000568548 ERVK11-1P61568 191 aa14.27□□□□□ -0.12
VAC14-210ENST00000568548 PRR31Q5SQ13 230 aa14.27□□□□□ -0.12
VAC14-210ENST00000568548 OR6C3Q9NZP0 311 aa14.27□□□□□ -0.12
VAC14-210ENST00000568548 TNRC6AQ8NDV7 1962 aaKnown RBP14.27□□□□□ -0.13
VAC14-210ENST00000568548 A6NNC1 897 aa14.27□□□□□ -0.13
VAC14-210ENST00000568548 PMS2P5A8MQ11 134 aa14.27□□□□□ -0.13
VAC14-210ENST00000568548 COX5BP10606 129 aa14.27□□□□□ -0.13
VAC14-210ENST00000568548 CBLN1P23435 193 aa14.27□□□□□ -0.13
VAC14-210ENST00000568548 SSTP61278 116 aa14.27□□□□□ -0.13
VAC14-210ENST00000568548 TDRG1Q3Y452 100 aa14.27□□□□□ -0.13
VAC14-210ENST00000568548 NRN1LQ496H8 165 aa14.27□□□□□ -0.13
VAC14-210ENST00000568548 OR5R1Q8NH85 324 aa14.27□□□□□ -0.13
VAC14-210ENST00000568548 TMEM170AQ8WVE7 144 aa14.27□□□□□ -0.13
VAC14-210ENST00000568548 GP6Q9HCN6 339 aa14.27□□□□□ -0.13
VAC14-210ENST00000568548 FKBP11Q9NYL4 201 aa14.27□□□□□ -0.13
VAC14-210ENST00000568548 DUSP13Q9UII6 198 aa14.27□□□□□ -0.13
VAC14-210ENST00000568548 POLDIP2Q9Y2S7 368 aa14.27□□□□□ -0.13
VAC14-210ENST00000568548 KMT2EQ8IZD2 1858 aa14.27□□□□□ -0.13
VAC14-210ENST00000568548 TMEM30CPA0ZSE6 113 aa14.26□□□□□ -0.13
VAC14-210ENST00000568548 HEYLQ9NQ87 328 aaPredicted RBP14.26□□□□□ -0.13
VAC14-210ENST00000568548 MBNL3Q9NUK0 354 aaKnown RBP14.26□□□□□ -0.13
VAC14-210ENST00000568548 PLXNB1O43157 2135 aa14.26□□□□□ -0.13
VAC14-210ENST00000568548 ACTL6BO94805 426 aa14.26□□□□□ -0.13
VAC14-210ENST00000568548 CD82P27701 267 aa14.26□□□□□ -0.13
VAC14-210ENST00000568548 TRIB1Q96RU8 372 aa14.26□□□□□ -0.13
VAC14-210ENST00000568548 FAM103A1Q9BTL3 118 aaKnown RBP14.26□□□□□ -0.13
VAC14-210ENST00000568548 NDUFAF3Q9BU61 184 aa14.26□□□□□ -0.13
VAC14-210ENST00000568548 PARD6AQ9NPB6 346 aa14.26□□□□□ -0.13
VAC14-210ENST00000568548 GNG12Q9UBI6 72 aa14.26□□□□□ -0.13
VAC14-210ENST00000568548 TRBV20OR9-2A0A075B6H5 130 aa14.25□□□□□ -0.13
VAC14-210ENST00000568548 SPATA31B1PQ5VZV4 182 aa14.25□□□□□ -0.13
VAC14-210ENST00000568548 KCNIP4Q6PIL6 250 aa14.25□□□□□ -0.13
VAC14-210ENST00000568548 MS4A10Q96PG2 267 aa14.25□□□□□ -0.13
VAC14-210ENST00000568548 SCO2A0A1W2PP80 73 aa14.25□□□□□ -0.13
VAC14-210ENST00000568548 TGOLN2O43493 480 aa14.25□□□□□ -0.13
VAC14-210ENST00000568548 TIMM8AO60220 97 aaPredicted RBP14.25□□□□□ -0.13
VAC14-210ENST00000568548 PROP1O75360 226 aa14.25□□□□□ -0.13
VAC14-210ENST00000568548 ARL14EPLP0DKL9 152 aa14.25□□□□□ -0.13
VAC14-210ENST00000568548 FOXF2Q12947 444 aa14.25□□□□□ -0.13
VAC14-210ENST00000568548 ZNF124Q15973 351 aa14.25□□□□□ -0.13
VAC14-210ENST00000568548 SPRNQ5BIV9 151 aa14.25□□□□□ -0.13
VAC14-210ENST00000568548 VHLLQ6RSH7 139 aa14.25□□□□□ -0.13
VAC14-210ENST00000568548 LINC00596Q86U02 117 aa14.25□□□□□ -0.13
VAC14-210ENST00000568548 DEFB124Q8NES8 71 aa14.25□□□□□ -0.13
VAC14-210ENST00000568548 SNHG12Q9BXW3 62 aa14.25□□□□□ -0.13
VAC14-210ENST00000568548 TOMM20LQ6UXN7 152 aa14.25□□□□□ -0.13
VAC14-210ENST00000568548 LINC01551Q86U37 167 aa14.25□□□□□ -0.13
VAC14-210ENST00000568548 ZNRF1Q8ND25 227 aa14.25□□□□□ -0.13
VAC14-210ENST00000568548 MANBALQ9NQG1 85 aa14.25□□□□□ -0.13
VAC14-210ENST00000568548 YLPM1P49750 1951 aaKnown RBP14.24□□□□□ -0.13
VAC14-210ENST00000568548 TRGV5A0A0B4J1U4 118 aa14.24□□□□□ -0.13
VAC14-210ENST00000568548 C15orf62A8K5M9 175 aa14.24□□□□□ -0.13
VAC14-210ENST00000568548 TMEM250H0YL14 139 aa14.24□□□□□ -0.13
VAC14-210ENST00000568548 CATR1Q13166 79 aa14.24□□□□□ -0.13
VAC14-210ENST00000568548 ZNF146Q15072 292 aa14.24□□□□□ -0.13
VAC14-210ENST00000568548 C11orf53Q8IXP5 236 aa14.24□□□□□ -0.13
VAC14-210ENST00000568548 R3HDM4Q96D70 268 aa14.24□□□□□ -0.13
VAC14-210ENST00000568548 FER1L6-AS2Q96M78 137 aa14.24□□□□□ -0.13
VAC14-210ENST00000568548 TBX15Q96SF7 602 aa14.24□□□□□ -0.13
VAC14-210ENST00000568548 ZDHHC11Q9H8X9 412 aa14.24□□□□□ -0.13
VAC14-210ENST00000568548 SPAARA0A1B0GVQ0 90 aa14.24□□□□□ -0.13
VAC14-210ENST00000568548 M0R1X1 148 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms