RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 LINC00473A8K010 186 aa3.69□□□□□ -1.82
CLK3-219ENST00000567805 SSX5O60225 188 aa3.69□□□□□ -1.82
CLK3-219ENST00000567805 CREBL2O60519 120 aaPredicted RBP3.69□□□□□ -1.82
CLK3-219ENST00000567805 SAP30O75446 220 aa3.69□□□□□ -1.82
CLK3-219ENST00000567805 CRYZL1O95825 349 aa3.69□□□□□ -1.82
CLK3-219ENST00000567805 IGHV3-11P01762 117 aa3.69□□□□□ -1.82
CLK3-219ENST00000567805 CLEC2LP0C7M8 214 aa3.69□□□□□ -1.82
CLK3-219ENST00000567805 NHLRC4P0CG21 123 aaPredicted RBP3.69□□□□□ -1.82
CLK3-219ENST00000567805 ZP3P21754 424 aa3.69□□□□□ -1.82
CLK3-219ENST00000567805 AADACP22760 399 aa3.69□□□□□ -1.82
CLK3-219ENST00000567805 NFYAP23511 347 aaPredicted RBP3.69□□□□□ -1.82
CLK3-219ENST00000567805 SLURP1P55000 103 aa3.69□□□□□ -1.82
CLK3-219ENST00000567805 ARPC4P59998 168 aa3.69□□□□□ -1.82
CLK3-219ENST00000567805 CDK10Q15131 360 aa3.69□□□□□ -1.82
CLK3-219ENST00000567805 PRSS8Q16651 343 aa3.69□□□□□ -1.82
CLK3-219ENST00000567805 VAX1Q5SQQ9 334 aa3.69□□□□□ -1.82
CLK3-219ENST00000567805 IDNKQ5T6J7 187 aa3.69□□□□□ -1.82
CLK3-219ENST00000567805 ACSM6Q6P461 480 aa3.69□□□□□ -1.82
CLK3-219ENST00000567805 KCTD9Q7L273 389 aa3.69□□□□□ -1.82
CLK3-219ENST00000567805 OVCH2Q7RTZ1 564 aa3.69□□□□□ -1.82
CLK3-219ENST00000567805 CROCCP3Q8IVE0 287 aa3.69□□□□□ -1.82
CLK3-219ENST00000567805 POC5Q8NA72 575 aa3.69□□□□□ -1.82
CLK3-219ENST00000567805 OR5T1Q8NG75 326 aa3.69□□□□□ -1.82
CLK3-219ENST00000567805 OR6Q1Q8NGQ2 317 aa3.69□□□□□ -1.82
CLK3-219ENST00000567805 OR5H6Q8NGV6 325 aa3.69□□□□□ -1.82
CLK3-219ENST00000567805 DCUN1D4Q92564 292 aa3.69□□□□□ -1.82
CLK3-219ENST00000567805 DLX4Q92988 240 aaPredicted RBP3.69□□□□□ -1.82
CLK3-219ENST00000567805 SLC25A38Q96DW6 304 aa3.69□□□□□ -1.82
CLK3-219ENST00000567805 PRR25Q96S07 402 aa3.69□□□□□ -1.82
CLK3-219ENST00000567805 PHB2Q99623 299 aa3.69□□□□□ -1.82
CLK3-219ENST00000567805 HSD17B10Q99714 261 aaKnown RBP3.69□□□□□ -1.82
CLK3-219ENST00000567805 DCUN1D5Q9BTE7 237 aa3.69□□□□□ -1.82
CLK3-219ENST00000567805 RNF167Q9H6Y7 350 aa3.69□□□□□ -1.82
CLK3-219ENST00000567805 RANGRFQ9HD47 186 aaPredicted RBP3.69□□□□□ -1.82
CLK3-219ENST00000567805 VCX3AQ9NNX9 186 aa3.69□□□□□ -1.82
CLK3-219ENST00000567805 DIABLOQ9NR28 239 aa3.69□□□□□ -1.82
CLK3-219ENST00000567805 ZNF355PQ9NSJ1 428 aa3.69□□□□□ -1.82
CLK3-219ENST00000567805 SPATA2Q9UM82 520 aa3.69□□□□□ -1.82
CLK3-219ENST00000567805 MRPS7Q9Y2R9 242 aaKnown RBP3.69□□□□□ -1.82
CLK3-219ENST00000567805 RBMX2Q9Y388 322 aaKnown RBP3.69□□□□□ -1.82
CLK3-219ENST00000567805 PRELID3BQ9Y3B1 194 aa3.69□□□□□ -1.82
CLK3-219ENST00000567805 LSM4Q9Y4Z0 139 aaKnown RBP3.69□□□□□ -1.82
CLK3-219ENST00000567805 TNCP24821 2201 aa3.68□□□□□ -1.82
CLK3-219ENST00000567805 SORL1Q92673 2214 aa3.68□□□□□ -1.82
CLK3-219ENST00000567805 TRAV18A0A075B6X5 111 aa3.68□□□□□ -1.82
CLK3-219ENST00000567805 A0A087WXM4 84 aa3.68□□□□□ -1.82
CLK3-219ENST00000567805 IGKV1D-13A0A0B4J2D9 117 aa3.68□□□□□ -1.82
CLK3-219ENST00000567805 MSGN1A6NI15 193 aa3.68□□□□□ -1.82
CLK3-219ENST00000567805 J3QRK9 145 aa3.68□□□□□ -1.82
CLK3-219ENST00000567805 MPPED1O15442 326 aa3.68□□□□□ -1.82
CLK3-219ENST00000567805 XRCC3O43542 346 aa3.68□□□□□ -1.82
CLK3-219ENST00000567805 FCGR3BO75015 233 aa3.68□□□□□ -1.82
CLK3-219ENST00000567805 TUSC2O75896 110 aa3.68□□□□□ -1.82
CLK3-219ENST00000567805 ACTL6BO94805 426 aa3.68□□□□□ -1.82
CLK3-219ENST00000567805 TNFAIP8O95379 198 aa3.68□□□□□ -1.82
CLK3-219ENST00000567805 LY86O95711 162 aa3.68□□□□□ -1.82
CLK3-219ENST00000567805 IGLV2-14P01704 120 aa3.68□□□□□ -1.82
CLK3-219ENST00000567805 OR9G9P0C7N8 305 aa3.68□□□□□ -1.82
CLK3-219ENST00000567805 SAA1P0DJI8 122 aaPredicted RBP3.68□□□□□ -1.82
CLK3-219ENST00000567805 IGKV1-13P0DP09 117 aa3.68□□□□□ -1.82
CLK3-219ENST00000567805 CBX5P45973 191 aa3.68□□□□□ -1.82
CLK3-219ENST00000567805 RPL30P62888 115 aaKnown RBP3.68□□□□□ -1.82
CLK3-219ENST00000567805 EIF4EBP1Q13541 118 aaPredicted RBP3.68□□□□□ -1.82
CLK3-219ENST00000567805 MSMO1Q15800 293 aa3.68□□□□□ -1.82
CLK3-219ENST00000567805 TNXAQ16473 311 aa3.68□□□□□ -1.82
CLK3-219ENST00000567805 MRGPRG-AS1Q2M3A8 158 aa3.68□□□□□ -1.82
CLK3-219ENST00000567805 C11orf87Q6NUJ2 197 aa3.68□□□□□ -1.82
CLK3-219ENST00000567805 ZNF343Q6P1L6 599 aa3.68□□□□□ -1.82
CLK3-219ENST00000567805 ZNF66Q6ZN08 573 aa3.68□□□□□ -1.82
CLK3-219ENST00000567805 IDO2Q6ZQW0 420 aa3.68□□□□□ -1.82
CLK3-219ENST00000567805 HOGA1Q86XE5 327 aa3.68□□□□□ -1.82
CLK3-219ENST00000567805 MMD2Q8IY49 270 aa3.68□□□□□ -1.82
CLK3-219ENST00000567805 GVQW1Q8N7I0 195 aa3.68□□□□□ -1.82
CLK3-219ENST00000567805 ADAD2Q8NCV1 583 aaKnown RBP3.68□□□□□ -1.82
CLK3-219ENST00000567805 BEST4Q8NFU0 473 aa3.68□□□□□ -1.82
CLK3-219ENST00000567805 TSPAN14Q8NG11 270 aa3.68□□□□□ -1.82
CLK3-219ENST00000567805 OR4S2Q8NH73 311 aa3.68□□□□□ -1.82
CLK3-219ENST00000567805 VSTM2AQ8TAG5 236 aa3.68□□□□□ -1.82
CLK3-219ENST00000567805 TCTEX1D2Q8WW35 142 aa3.68□□□□□ -1.82
CLK3-219ENST00000567805 SRSF12Q8WXF0 261 aaKnown RBP3.68□□□□□ -1.82
CLK3-219ENST00000567805 ACOT12Q8WYK0 555 aa3.68□□□□□ -1.82
CLK3-219ENST00000567805 USMG5Q96IX5 58 aa3.68□□□□□ -1.82
CLK3-219ENST00000567805 OR4C12Q96R67 309 aa3.68□□□□□ -1.82
CLK3-219ENST00000567805 SPIN2AQ99865 258 aa3.68□□□□□ -1.82
CLK3-219ENST00000567805 SPIN2BQ9BPZ2 258 aa3.68□□□□□ -1.82
CLK3-219ENST00000567805 ELOVL1Q9BW60 279 aa3.68□□□□□ -1.82
CLK3-219ENST00000567805 TINAGL1Q9GZM7 467 aaPredicted RBP3.68□□□□□ -1.82
CLK3-219ENST00000567805 ZNF430Q9H8G1 570 aaPredicted RBP3.68□□□□□ -1.82
CLK3-219ENST00000567805 COA4Q9NYJ1 87 aa3.68□□□□□ -1.82
CLK3-219ENST00000567805 LYSTQ99698 3801 aa3.67□□□□□ -1.82
CLK3-219ENST00000567805 ANKRD34BA5PLL1 514 aa3.67□□□□□ -1.82
CLK3-219ENST00000567805 FAM223BA6NKX1 122 aa3.67□□□□□ -1.82
CLK3-219ENST00000567805 AIREO43918 545 aa3.67□□□□□ -1.82
CLK3-219ENST00000567805 KBTBD11O94819 623 aa3.67□□□□□ -1.82
CLK3-219ENST00000567805 OR2A4O95047 310 aa3.67□□□□□ -1.82
CLK3-219ENST00000567805 HRASP01112 189 aa3.67□□□□□ -1.82
CLK3-219ENST00000567805 PPYP01298 95 aa3.67□□□□□ -1.82
CLK3-219ENST00000567805 IGLV1-51P01701 117 aa3.67□□□□□ -1.82
CLK3-219ENST00000567805 APELAP0DMC3 54 aa3.67□□□□□ -1.82
CLK3-219ENST00000567805 GP9P14770 177 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms