RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 RBM14Q96PK6 669 aaKnown RBP10.74□□□□□ -0.69
CLK3-218ENST00000566926 NEURL2Q9BR09 285 aa10.74□□□□□ -0.69
CLK3-218ENST00000566926 SLC25A33Q9BSK2 321 aa10.74□□□□□ -0.69
CLK3-218ENST00000566926 IFI27L2Q9H2X8 130 aa10.74□□□□□ -0.69
CLK3-218ENST00000566926 DBX1A6NMT0 343 aa10.73□□□□□ -0.69
CLK3-218ENST00000566926 FAM90A9PA6NNJ1 464 aa10.73□□□□□ -0.69
CLK3-218ENST00000566926 TXNL1O43396 289 aa10.73□□□□□ -0.69
CLK3-218ENST00000566926 ATG12O94817 140 aa10.73□□□□□ -0.69
CLK3-218ENST00000566926 IGLV2-14P01704 120 aa10.73□□□□□ -0.69
CLK3-218ENST00000566926 GIPP09681 153 aaPredicted RBP10.73□□□□□ -0.69
CLK3-218ENST00000566926 RPA2P15927 270 aa10.73□□□□□ -0.69
CLK3-218ENST00000566926 FCN2Q15485 313 aa10.73□□□□□ -0.69
CLK3-218ENST00000566926 TCTE3Q8IZS6 198 aa10.73□□□□□ -0.69
CLK3-218ENST00000566926 CASTOR1Q8WTX7 329 aa10.73□□□□□ -0.69
CLK3-218ENST00000566926 S1PR3Q99500 378 aa10.73□□□□□ -0.69
CLK3-218ENST00000566926 TMEM222Q9H0R3 208 aa10.73□□□□□ -0.69
CLK3-218ENST00000566926 ZNF702PQ9H963 129 aa10.73□□□□□ -0.69
CLK3-218ENST00000566926 MGAT4CQ9UBM8 478 aa10.73□□□□□ -0.69
CLK3-218ENST00000566926 SIGLEC9Q9Y336 463 aa10.73□□□□□ -0.69
CLK3-218ENST00000566926 A0A1W2PPE3 182 aa10.72□□□□□ -0.69
CLK3-218ENST00000566926 A0A1W2PPI3 338 aa10.72□□□□□ -0.69
CLK3-218ENST00000566926 ST8SIA5O15466 376 aa10.72□□□□□ -0.69
CLK3-218ENST00000566926 IFNA21P01568 189 aa10.72□□□□□ -0.69
CLK3-218ENST00000566926 OR5AC1P0C628 307 aa10.72□□□□□ -0.69
CLK3-218ENST00000566926 CD24P25063 80 aa10.72□□□□□ -0.69
CLK3-218ENST00000566926 UCP1P25874 307 aa10.72□□□□□ -0.69
CLK3-218ENST00000566926 KIR2DS2P43631 304 aa10.72□□□□□ -0.69
CLK3-218ENST00000566926 KRTAP10-3P60369 221 aa10.72□□□□□ -0.69
CLK3-218ENST00000566926 CYCSP99999 105 aaKnown RBP10.72□□□□□ -0.69
CLK3-218ENST00000566926 TAGLNQ01995 201 aaKnown RBP10.72□□□□□ -0.69
CLK3-218ENST00000566926 SRSF4Q08170 494 aaKnown RBP10.72□□□□□ -0.69
CLK3-218ENST00000566926 HES1Q14469 280 aa10.72□□□□□ -0.69
CLK3-218ENST00000566926 KLHDC1Q8N7A1 406 aa10.72□□□□□ -0.69
CLK3-218ENST00000566926 OR11H7Q8NGC8 314 aa10.72□□□□□ -0.69
CLK3-218ENST00000566926 OR5M8Q8NGP6 311 aa10.72□□□□□ -0.69
CLK3-218ENST00000566926 TMEM56Q96MV1 263 aa10.72□□□□□ -0.69
CLK3-218ENST00000566926 ZNF436Q9C0F3 470 aaPredicted RBP10.72□□□□□ -0.69
CLK3-218ENST00000566926 PARP12Q9H0J9 701 aaKnown RBP10.72□□□□□ -0.69
CLK3-218ENST00000566926 SDHAF2Q9NX18 166 aa10.72□□□□□ -0.69
CLK3-218ENST00000566926 TMEM56-RWDD3S4R434 201 aa10.72□□□□□ -0.69
CLK3-218ENST00000566926 IGHV1-3A0A0C4DH29 117 aa10.71□□□□□ -0.69
CLK3-218ENST00000566926 RBFOX2O43251 390 aaKnown RBP eCLIP10.71□□□□□ -0.69
CLK3-218ENST00000566926 SNAPC5O75971 98 aa10.71□□□□□ -0.69
CLK3-218ENST00000566926 OR2A4O95047 310 aa10.71□□□□□ -0.69
CLK3-218ENST00000566926 SERPINE2P07093 398 aa10.71□□□□□ -0.69
CLK3-218ENST00000566926 SNRNP70P08621 437 aaKnown RBP10.71□□□□□ -0.69
CLK3-218ENST00000566926 TMEM11P17152 192 aa10.71□□□□□ -0.69
CLK3-218ENST00000566926 VDAC2P45880 294 aaPredicted RBP10.71□□□□□ -0.69
CLK3-218ENST00000566926 ZNF137PP52743 207 aa10.71□□□□□ -0.69
CLK3-218ENST00000566926 RAP2BP61225 183 aa10.71□□□□□ -0.69
CLK3-218ENST00000566926 BLCAPP62952 87 aa10.71□□□□□ -0.69
CLK3-218ENST00000566926 TMEM187Q14656 261 aa10.71□□□□□ -0.69
CLK3-218ENST00000566926 CT45A1Q5HYN5 189 aa10.71□□□□□ -0.69
CLK3-218ENST00000566926 MOB3BQ86TA1 216 aa10.71□□□□□ -0.69
CLK3-218ENST00000566926 UXS1Q8NBZ7 420 aa10.71□□□□□ -0.69
CLK3-218ENST00000566926 CT45A3Q8NHU0 189 aa10.71□□□□□ -0.69
CLK3-218ENST00000566926 GLYATL2Q8WU03 294 aa10.71□□□□□ -0.69
CLK3-218ENST00000566926 CFHR4Q92496 578 aa10.71□□□□□ -0.69
CLK3-218ENST00000566926 OR2A7Q96R45 310 aa10.71□□□□□ -0.69
CLK3-218ENST00000566926 SERTAD4Q9NUC0 356 aa10.71□□□□□ -0.69
CLK3-218ENST00000566926 MOB4Q9Y3A3 225 aa10.71□□□□□ -0.69
CLK3-218ENST00000566926 PRELID3BQ9Y3B1 194 aa10.71□□□□□ -0.69
CLK3-218ENST00000566926 TMED3Q9Y3Q3 217 aa10.71□□□□□ -0.69
CLK3-218ENST00000566926 MGAM2Q2M2H8 2515 aa10.71□□□□□ -0.7
CLK3-218ENST00000566926 NBEAL1Q6ZS30 2694 aa10.7□□□□□ -0.7
CLK3-218ENST00000566926 GOSR2O14653 212 aa10.7□□□□□ -0.7
CLK3-218ENST00000566926 CDS2O95674 445 aa10.7□□□□□ -0.7
CLK3-218ENST00000566926 CD1BP29016 333 aa10.7□□□□□ -0.7
CLK3-218ENST00000566926 THBS3P49746 956 aa10.7□□□□□ -0.7
CLK3-218ENST00000566926 ZNF134P52741 427 aa10.7□□□□□ -0.7
CLK3-218ENST00000566926 CD83Q01151 205 aa10.7□□□□□ -0.7
CLK3-218ENST00000566926 EIF4EBP1Q13541 118 aaPredicted RBP10.7□□□□□ -0.7
CLK3-218ENST00000566926 DIAPH2-AS1Q14236 149 aa10.7□□□□□ -0.7
CLK3-218ENST00000566926 HABP2Q14520 560 aaPredicted RBP10.7□□□□□ -0.7
CLK3-218ENST00000566926 C2orf68Q2NKX9 166 aa10.7□□□□□ -0.7
CLK3-218ENST00000566926 ANKRD55Q3KP44 614 aa10.7□□□□□ -0.7
CLK3-218ENST00000566926 TREML4Q6UXN2 200 aa10.7□□□□□ -0.7
CLK3-218ENST00000566926 GSG1LQ6UXU4 331 aa10.7□□□□□ -0.7
CLK3-218ENST00000566926 TGIF2LXQ8IUE1 241 aa10.7□□□□□ -0.7
CLK3-218ENST00000566926 ZNF695Q8IW36 515 aa10.7□□□□□ -0.7
CLK3-218ENST00000566926 LYG1Q8N1E2 194 aa10.7□□□□□ -0.7
CLK3-218ENST00000566926 OR2T10Q8NGZ9 312 aa10.7□□□□□ -0.7
CLK3-218ENST00000566926 RBPMSQ93062 196 aaKnown RBP10.7□□□□□ -0.7
CLK3-218ENST00000566926 ST6GALNAC6Q969X2 333 aa10.7□□□□□ -0.7
CLK3-218ENST00000566926 ST6GAL2Q96JF0 529 aa10.7□□□□□ -0.7
CLK3-218ENST00000566926 SPIN2AQ99865 258 aa10.7□□□□□ -0.7
CLK3-218ENST00000566926 SPIN2BQ9BPZ2 258 aa10.7□□□□□ -0.7
CLK3-218ENST00000566926 RNF150Q9ULK6 438 aa10.7□□□□□ -0.7
CLK3-218ENST00000566926 SAA2-SAA4A0A096LPE2 208 aa10.69□□□□□ -0.7
CLK3-218ENST00000566926 FGF16O43320 207 aa10.69□□□□□ -0.7
CLK3-218ENST00000566926 TNFSF12O43508 249 aa10.69□□□□□ -0.7
CLK3-218ENST00000566926 IGKV1D-33P01593 117 aa10.69□□□□□ -0.7
CLK3-218ENST00000566926 IGKV1-33P01594 117 aa10.69□□□□□ -0.7
CLK3-218ENST00000566926 HNRNPCP07910 306 aaKnown RBP eCLIP10.69□□□□□ -0.7
CLK3-218ENST00000566926 SAA2P0DJI9 122 aaPredicted RBP10.69□□□□□ -0.7
CLK3-218ENST00000566926 CXCL3P19876 107 aa10.69□□□□□ -0.7
CLK3-218ENST00000566926 DUTP33316 252 aaKnown RBP10.69□□□□□ -0.7
CLK3-218ENST00000566926 REG1BP48304 166 aa10.69□□□□□ -0.7
CLK3-218ENST00000566926 FGL1Q08830 312 aa10.69□□□□□ -0.7
CLK3-218ENST00000566926 EBI3Q14213 229 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms