RNA–Protein interactions for RNA: ENST00000566009.5

SMPD3-206, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-206ENST00000566009 OR13C9Q8NGT0 318 aa6.12□□□□□ -1.43
SMPD3-206ENST00000566009 OR2T29Q8NH02 315 aa6.12□□□□□ -1.43
SMPD3-206ENST00000566009 RNF141Q8WVD5 230 aa6.12□□□□□ -1.43
SMPD3-206ENST00000566009 ACOT12Q8WYK0 555 aa6.12□□□□□ -1.43
SMPD3-206ENST00000566009 CMTM3Q96MX0 182 aa6.12□□□□□ -1.43
SMPD3-206ENST00000566009 SPIN2AQ99865 258 aa6.12□□□□□ -1.43
SMPD3-206ENST00000566009 SPIN2BQ9BPZ2 258 aa6.12□□□□□ -1.43
SMPD3-206ENST00000566009 RHPN1-AS1Q9BWJ2 59 aa6.12□□□□□ -1.43
SMPD3-206ENST00000566009 RRP15Q9Y3B9 282 aaKnown RBP6.12□□□□□ -1.43
SMPD3-206ENST00000566009 SMIM9A6NGZ8 99 aa6.11□□□□□ -1.43
SMPD3-206ENST00000566009 HMX3A6NHT5 357 aa6.11□□□□□ -1.43
SMPD3-206ENST00000566009 ZNF705FA8MVS1 300 aaPredicted RBP6.11□□□□□ -1.43
SMPD3-206ENST00000566009 APOA2P02652 100 aa6.11□□□□□ -1.43
SMPD3-206ENST00000566009 ZNF705DP0CH99 300 aaPredicted RBP6.11□□□□□ -1.43
SMPD3-206ENST00000566009 ZNF705BP0CI00 300 aaPredicted RBP6.11□□□□□ -1.43
SMPD3-206ENST00000566009 RAP2AP10114 183 aa6.11□□□□□ -1.43
SMPD3-206ENST00000566009 ATP6V1B2P21281 511 aa6.11□□□□□ -1.43
SMPD3-206ENST00000566009 SLC2A5P22732 501 aa6.11□□□□□ -1.43
SMPD3-206ENST00000566009 SOX2P48431 317 aa6.11□□□□□ -1.43
SMPD3-206ENST00000566009 ODF1Q14990 250 aa6.11□□□□□ -1.43
SMPD3-206ENST00000566009 CEACAM19Q7Z692 300 aa6.11□□□□□ -1.43
SMPD3-206ENST00000566009 GAPTQ8N292 157 aa6.11□□□□□ -1.43
SMPD3-206ENST00000566009 REEP1Q9H902 201 aa6.11□□□□□ -1.43
SMPD3-206ENST00000566009 KCNIP1Q9NZI2 227 aa6.11□□□□□ -1.43
SMPD3-206ENST00000566009 XCL2Q9UBD3 114 aa6.11□□□□□ -1.43
SMPD3-206ENST00000566009 RFNGQ9Y644 331 aa6.11□□□□□ -1.43
SMPD3-206ENST00000566009 IGHV3-49A0A0A0MS15 119 aa6.1□□□□□ -1.43
SMPD3-206ENST00000566009 AQP12BA6NM10 295 aa6.1□□□□□ -1.43
SMPD3-206ENST00000566009 F5H768 121 aa6.1□□□□□ -1.43
SMPD3-206ENST00000566009 GNGT2O14610 69 aa6.1□□□□□ -1.43
SMPD3-206ENST00000566009 GYG2O15488 501 aa6.1□□□□□ -1.43
SMPD3-206ENST00000566009 CST1P01037 141 aa6.1□□□□□ -1.43
SMPD3-206ENST00000566009 GNB3P16520 340 aa6.1□□□□□ -1.43
SMPD3-206ENST00000566009 HOXB6P17509 224 aaKnown RBP6.1□□□□□ -1.43
SMPD3-206ENST00000566009 IRF3Q14653 427 aa6.1□□□□□ -1.43
SMPD3-206ENST00000566009 RSU1Q15404 277 aa6.1□□□□□ -1.43
SMPD3-206ENST00000566009 ATP6AP1Q15904 470 aa6.1□□□□□ -1.43
SMPD3-206ENST00000566009 C10orf55Q5SWW7 151 aa6.1□□□□□ -1.43
SMPD3-206ENST00000566009 NXNL2Q5VZ03 156 aa6.1□□□□□ -1.43
SMPD3-206ENST00000566009 CD300LDQ6UXZ3 194 aa6.1□□□□□ -1.43
SMPD3-206ENST00000566009 LRRTM1Q86UE6 522 aa6.1□□□□□ -1.43
SMPD3-206ENST00000566009 NFE4Q86UQ8 179 aa6.1□□□□□ -1.43
SMPD3-206ENST00000566009 AQP12AQ8IXF9 295 aa6.1□□□□□ -1.43
SMPD3-206ENST00000566009 AQP11Q8NBQ7 271 aa6.1□□□□□ -1.43
SMPD3-206ENST00000566009 OR52N1Q8NH53 320 aa6.1□□□□□ -1.43
SMPD3-206ENST00000566009 GIPC3Q8TF64 312 aa6.1□□□□□ -1.43
SMPD3-206ENST00000566009 NTN5Q8WTR8 489 aaPredicted RBP6.1□□□□□ -1.43
SMPD3-206ENST00000566009 CANT1Q8WVQ1 401 aa6.1□□□□□ -1.43
SMPD3-206ENST00000566009 GALMQ96C23 342 aa6.1□□□□□ -1.43
SMPD3-206ENST00000566009 DAZAP1Q96EP5 407 aaKnown RBP6.1□□□□□ -1.43
SMPD3-206ENST00000566009 PELI1Q96FA3 418 aa6.1□□□□□ -1.43
SMPD3-206ENST00000566009 CXorf58Q96LI9 332 aa6.1□□□□□ -1.43
SMPD3-206ENST00000566009 HARBI1Q96MB7 349 aa6.1□□□□□ -1.43
SMPD3-206ENST00000566009 OR14A2Q96R54 314 aa6.1□□□□□ -1.43
SMPD3-206ENST00000566009 AGMATQ9BSE5 352 aa6.1□□□□□ -1.43
SMPD3-206ENST00000566009 TM2D1Q9BX74 207 aa6.1□□□□□ -1.43
SMPD3-206ENST00000566009 C1QTNF4Q9BXJ3 329 aa6.1□□□□□ -1.43
SMPD3-206ENST00000566009 STEAP1Q9UHE8 339 aa6.1□□□□□ -1.43
SMPD3-206ENST00000566009 SAMHD1Q9Y3Z3 626 aaKnown RBP6.1□□□□□ -1.43
SMPD3-206ENST00000566009 YTHDF2Q9Y5A9 579 aaKnown RBP6.1□□□□□ -1.43
SMPD3-206ENST00000566009 IGHV7-4-1A0A0J9YVY3 117 aa6.09□□□□□ -1.43
SMPD3-206ENST00000566009 NPIPB5A8MRT5 1133 aa6.09□□□□□ -1.43
SMPD3-206ENST00000566009 MCRIP1C9JLW8 97 aa6.09□□□□□ -1.43
SMPD3-206ENST00000566009 DNASE2O00115 360 aaPredicted RBP6.09□□□□□ -1.43
SMPD3-206ENST00000566009 NDUFA4O00483 81 aa6.09□□□□□ -1.43
SMPD3-206ENST00000566009 EBAG9O00559 213 aa6.09□□□□□ -1.43
SMPD3-206ENST00000566009 ALDH3B2P48448 385 aa6.09□□□□□ -1.43
SMPD3-206ENST00000566009 RBM11P57052 281 aaKnown RBP6.09□□□□□ -1.43
SMPD3-206ENST00000566009 PLA2G7Q13093 441 aa6.09□□□□□ -1.43
SMPD3-206ENST00000566009 ESRGQ1W209 222 aa6.09□□□□□ -1.43
SMPD3-206ENST00000566009 MPV17LQ2QL34 196 aa6.09□□□□□ -1.43
SMPD3-206ENST00000566009 KLK9Q2XQG4 91 aa6.09□□□□□ -1.43
SMPD3-206ENST00000566009 DNAL1Q4LDG9 190 aa6.09□□□□□ -1.43
SMPD3-206ENST00000566009 NHLRC3Q5JS37 347 aa6.09□□□□□ -1.43
SMPD3-206ENST00000566009 ACTL10Q5JWF8 245 aa6.09□□□□□ -1.43
SMPD3-206ENST00000566009 UBE2UQ5VVX9 321 aa6.09□□□□□ -1.43
SMPD3-206ENST00000566009 IDO2Q6ZQW0 420 aa6.09□□□□□ -1.43
SMPD3-206ENST00000566009 TCF24Q7RTU0 167 aa6.09□□□□□ -1.43
SMPD3-206ENST00000566009 SCXQ7RTU7 201 aa6.09□□□□□ -1.43
SMPD3-206ENST00000566009 ZNF554Q86TJ5 538 aa6.09□□□□□ -1.43
SMPD3-206ENST00000566009 TEX45Q8NA69 505 aa6.09□□□□□ -1.43
SMPD3-206ENST00000566009 TMEM116Q8NCL8 245 aa6.09□□□□□ -1.43
SMPD3-206ENST00000566009 ZNF502Q8TBZ5 544 aa6.09□□□□□ -1.43
SMPD3-206ENST00000566009 TNFAIP8L1Q8WVP5 186 aa6.09□□□□□ -1.43
SMPD3-206ENST00000566009 FEVQ99581 238 aa6.09□□□□□ -1.43
SMPD3-206ENST00000566009 MS4A6AQ9H2W1 248 aa6.09□□□□□ -1.43
SMPD3-206ENST00000566009 KLK9Q9UKQ9 250 aa6.09□□□□□ -1.43
SMPD3-206ENST00000566009 MRPS16Q9Y3D3 137 aaKnown RBP6.09□□□□□ -1.43
SMPD3-206ENST00000566009 IGHV3OR16-12A0A075B7B8 117 aa6.08□□□□□ -1.44
SMPD3-206ENST00000566009 DPPA5A6NC42 116 aa6.08□□□□□ -1.44
SMPD3-206ENST00000566009 C15orf62A8K5M9 175 aa6.08□□□□□ -1.44
SMPD3-206ENST00000566009 GPX5O75715 221 aa6.08□□□□□ -1.44
SMPD3-206ENST00000566009 ACTL6BO94805 426 aa6.08□□□□□ -1.44
SMPD3-206ENST00000566009 UBCP0CG48 685 aaKnown RBP6.08□□□□□ -1.44
SMPD3-206ENST00000566009 PRKACGP22612 351 aa6.08□□□□□ -1.44
SMPD3-206ENST00000566009 CAPGP40121 348 aa6.08□□□□□ -1.44
SMPD3-206ENST00000566009 OR2B8PP59922 312 aa6.08□□□□□ -1.44
SMPD3-206ENST00000566009 SPATA24Q86W54 205 aa6.08□□□□□ -1.44
SMPD3-206ENST00000566009 ADGRG5Q8IZF4 528 aa6.08□□□□□ -1.44
SMPD3-206ENST00000566009 OR10G2Q8NGC3 310 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms