RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 PTBP1P26599 531 aaKnown RBP eCLIP6.82□□□□□ -1.32
VPS9D1-205ENST00000565452 BMI1P35226 326 aa6.82□□□□□ -1.32
VPS9D1-205ENST00000565452 TCTAP57738 103 aa6.82□□□□□ -1.32
VPS9D1-205ENST00000565452 MRPS10P82664 201 aaKnown RBP6.82□□□□□ -1.32
VPS9D1-205ENST00000565452 EWSR1Q01844 656 aaKnown RBP eCLIP6.82□□□□□ -1.32
VPS9D1-205ENST00000565452 SSBP1Q04837 148 aaKnown RBP6.82□□□□□ -1.32
VPS9D1-205ENST00000565452 MMDQ15546 238 aa6.82□□□□□ -1.32
VPS9D1-205ENST00000565452 WFDC3Q8IUB2 231 aa6.82□□□□□ -1.32
VPS9D1-205ENST00000565452 LINC00311Q8N616 119 aa6.82□□□□□ -1.32
VPS9D1-205ENST00000565452 CASTOR1Q8WTX7 329 aa6.82□□□□□ -1.32
VPS9D1-205ENST00000565452 RNF183Q96D59 192 aa6.82□□□□□ -1.32
VPS9D1-205ENST00000565452 DIRAS2Q96HU8 199 aa6.82□□□□□ -1.32
VPS9D1-205ENST00000565452 MS4A10Q96PG2 267 aa6.82□□□□□ -1.32
VPS9D1-205ENST00000565452 YPEL2Q96QA6 119 aa6.82□□□□□ -1.32
VPS9D1-205ENST00000565452 ZNF251Q9BRH9 671 aa6.82□□□□□ -1.32
VPS9D1-205ENST00000565452 SLA2Q9H6Q3 261 aa6.82□□□□□ -1.32
VPS9D1-205ENST00000565452 GFOD1Q9NXC2 390 aa6.82□□□□□ -1.32
VPS9D1-205ENST00000565452 SLC23A1Q9UHI7 598 aa6.82□□□□□ -1.32
VPS9D1-205ENST00000565452 JPT1Q9UK76 154 aa6.82□□□□□ -1.32
VPS9D1-205ENST00000565452 TMEM235A6NFC5 223 aa6.81□□□□□ -1.32
VPS9D1-205ENST00000565452 PRSS29PA6NIE9 313 aa6.81□□□□□ -1.32
VPS9D1-205ENST00000565452 SDCBPO00560 298 aaPredicted RBP6.81□□□□□ -1.32
VPS9D1-205ENST00000565452 SOX15O60248 233 aa6.81□□□□□ -1.32
VPS9D1-205ENST00000565452 HLA-DQB1P01920 261 aa6.81□□□□□ -1.32
VPS9D1-205ENST00000565452 EIF4EP06730 217 aaKnown RBP6.81□□□□□ -1.32
VPS9D1-205ENST00000565452 CSN3P07498 182 aa6.81□□□□□ -1.32
VPS9D1-205ENST00000565452 FCGR3AP08637 254 aa6.81□□□□□ -1.32
VPS9D1-205ENST00000565452 CD7P09564 240 aa6.81□□□□□ -1.32
VPS9D1-205ENST00000565452 ZBTB25P24278 435 aa6.81□□□□□ -1.32
VPS9D1-205ENST00000565452 MECP2P51608 486 aaKnown RBP6.81□□□□□ -1.32
VPS9D1-205ENST00000565452 SYNJ2BPP57105 145 aa6.81□□□□□ -1.32
VPS9D1-205ENST00000565452 TPPP2P59282 170 aa6.81□□□□□ -1.32
VPS9D1-205ENST00000565452 TAS2R20P59543 309 aa6.81□□□□□ -1.32
VPS9D1-205ENST00000565452 HLA-DRB3P79483 266 aa6.81□□□□□ -1.32
VPS9D1-205ENST00000565452 ECSCRQ19T08 205 aa6.81□□□□□ -1.32
VPS9D1-205ENST00000565452 MORN2Q502X0 79 aa6.81□□□□□ -1.32
VPS9D1-205ENST00000565452 ZNF660Q6AZW8 331 aaPredicted RBP6.81□□□□□ -1.32
VPS9D1-205ENST00000565452 CNIH2Q6PI25 160 aa6.81□□□□□ -1.32
VPS9D1-205ENST00000565452 SETD6Q8TBK2 473 aa6.81□□□□□ -1.32
VPS9D1-205ENST00000565452 EDARADDQ8WWZ3 215 aa6.81□□□□□ -1.32
VPS9D1-205ENST00000565452 GGTLC1Q9BX51 225 aa6.81□□□□□ -1.32
VPS9D1-205ENST00000565452 C6orf62Q9GZU0 229 aaPredicted RBP6.81□□□□□ -1.32
VPS9D1-205ENST00000565452 OR2S2Q9NQN1 319 aa6.81□□□□□ -1.32
VPS9D1-205ENST00000565452 GNG12Q9UBI6 72 aa6.81□□□□□ -1.32
VPS9D1-205ENST00000565452 TP53TG1Q9Y2A0 90 aa6.81□□□□□ -1.32
VPS9D1-205ENST00000565452 NUBP2Q9Y5Y2 271 aa6.81□□□□□ -1.32
VPS9D1-205ENST00000565452 LOC102724200A0A096LPH7 203 aaPredicted RBP6.8□□□□□ -1.32
VPS9D1-205ENST00000565452 A0A0G2JLM5 398 aa6.8□□□□□ -1.32
VPS9D1-205ENST00000565452 C13orf42A0A1B0GVH6 325 aa6.8□□□□□ -1.32
VPS9D1-205ENST00000565452 ZNF785A8K8V0 405 aa6.8□□□□□ -1.32
VPS9D1-205ENST00000565452 CTDSPLO15194 276 aa6.8□□□□□ -1.32
VPS9D1-205ENST00000565452 FABP7O15540 132 aa6.8□□□□□ -1.32
VPS9D1-205ENST00000565452 SPRY2O43597 315 aa6.8□□□□□ -1.32
VPS9D1-205ENST00000565452 NAT1P18440 290 aa6.8□□□□□ -1.32
VPS9D1-205ENST00000565452 TNFSF8P32971 234 aa6.8□□□□□ -1.32
VPS9D1-205ENST00000565452 SSTR5P35346 364 aa6.8□□□□□ -1.32
VPS9D1-205ENST00000565452 ZNF45Q02386 682 aa6.8□□□□□ -1.32
VPS9D1-205ENST00000565452 C5orf64Q2M2E5 130 aa6.8□□□□□ -1.32
VPS9D1-205ENST00000565452 AKIRIN2Q53H80 203 aa6.8□□□□□ -1.32
VPS9D1-205ENST00000565452 ACTBL2Q562R1 376 aa6.8□□□□□ -1.32
VPS9D1-205ENST00000565452 C19orf54Q5BKX5 351 aa6.8□□□□□ -1.32
VPS9D1-205ENST00000565452 SLC25A48Q6ZT89 311 aaKnown RBP6.8□□□□□ -1.32
VPS9D1-205ENST00000565452 HOGA1Q86XE5 327 aa6.8□□□□□ -1.32
VPS9D1-205ENST00000565452 OR10J5Q8NHC4 309 aa6.8□□□□□ -1.32
VPS9D1-205ENST00000565452 GPX8Q8TED1 209 aa6.8□□□□□ -1.32
VPS9D1-205ENST00000565452 FCAMRQ8WWV6 532 aa6.8□□□□□ -1.32
VPS9D1-205ENST00000565452 DCUN1D5Q9BTE7 237 aa6.8□□□□□ -1.32
VPS9D1-205ENST00000565452 MIXL1Q9H2W2 232 aa6.8□□□□□ -1.32
VPS9D1-205ENST00000565452 PEMTQ9UBM1 199 aa6.8□□□□□ -1.32
VPS9D1-205ENST00000565452 EXTL2Q9UBQ6 330 aa6.8□□□□□ -1.32
VPS9D1-205ENST00000565452 GAB2Q9UQC2 676 aa6.8□□□□□ -1.32
VPS9D1-205ENST00000565452 MRPS7Q9Y2R9 242 aaKnown RBP6.8□□□□□ -1.32
VPS9D1-205ENST00000565452 DYNC1H1Q14204 4646 aaKnown RBP6.8□□□□□ -1.32
VPS9D1-205ENST00000565452 DNAH17Q9UFH2 4485 aa6.8□□□□□ -1.32
VPS9D1-205ENST00000565452 DNAH11Q96DT5 4516 aa6.79□□□□□ -1.32
VPS9D1-205ENST00000565452 TRBV6-7A0A0A0MS04 114 aa6.79□□□□□ -1.32
VPS9D1-205ENST00000565452 TRAV39A0A0B4J263 110 aa6.79□□□□□ -1.32
VPS9D1-205ENST00000565452 ANKRD34BA5PLL1 514 aa6.79□□□□□ -1.32
VPS9D1-205ENST00000565452 FABP12A6NFH5 140 aa6.79□□□□□ -1.32
VPS9D1-205ENST00000565452 GABARAPH6UMI1 98 aa6.79□□□□□ -1.32
VPS9D1-205ENST00000565452 SSX5O60225 188 aa6.79□□□□□ -1.32
VPS9D1-205ENST00000565452 RBBP9O75884 186 aa6.79□□□□□ -1.32
VPS9D1-205ENST00000565452 SLC22A5O76082 557 aa6.79□□□□□ -1.32
VPS9D1-205ENST00000565452 TRGV3P03979 118 aa6.79□□□□□ -1.32
VPS9D1-205ENST00000565452 SCTP09683 121 aa6.79□□□□□ -1.32
VPS9D1-205ENST00000565452 GSTT2P0CG29 244 aa6.79□□□□□ -1.32
VPS9D1-205ENST00000565452 GSTT2BP0CG30 244 aa6.79□□□□□ -1.32
VPS9D1-205ENST00000565452 CEACAM6P40199 344 aa6.79□□□□□ -1.32
VPS9D1-205ENST00000565452 ETV6P41212 452 aa6.79□□□□□ -1.32
VPS9D1-205ENST00000565452 ZNF137PP52743 207 aa6.79□□□□□ -1.32
VPS9D1-205ENST00000565452 CRIP2P52943 208 aaPredicted RBP6.79□□□□□ -1.32
VPS9D1-205ENST00000565452 ACTBP60709 375 aa6.79□□□□□ -1.32
VPS9D1-205ENST00000565452 GUCA2BQ16661 112 aa6.79□□□□□ -1.32
VPS9D1-205ENST00000565452 SPANXN2Q5MJ10 180 aa6.79□□□□□ -1.32
VPS9D1-205ENST00000565452 Q6ZWC4 215 aa6.79□□□□□ -1.32
VPS9D1-205ENST00000565452 SLC16A13Q7RTY0 426 aa6.79□□□□□ -1.32
VPS9D1-205ENST00000565452 PRR18Q8N4B5 295 aa6.79□□□□□ -1.32
VPS9D1-205ENST00000565452 BEST4Q8NFU0 473 aa6.79□□□□□ -1.32
VPS9D1-205ENST00000565452 OR5AP2Q8NGF4 316 aa6.79□□□□□ -1.32
VPS9D1-205ENST00000565452 OR1L1Q8NH94 360 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms