RNA–Protein interactions for RNA: ENST00000564778.5

SIN3A-205, Transcript of SIN3 transcription regulator family member A, human

TSL 2

Gene SIN3A, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIN3A-205	ENST00000564778	RAB18	Q9NP72	206 aa		7.9	□□□□□ -1.14
SIN3A-205	ENST00000564778	FAM96B	Q9Y3D0	163 aa		7.9	□□□□□ -1.14
SIN3A-205	ENST00000564778	TMED3	Q9Y3Q3	217 aa		7.9	□□□□□ -1.14
SIN3A-205	ENST00000564778	TNC	P24821	2201 aa		7.89	□□□□□ -1.15
SIN3A-205	ENST00000564778	IGHV3-72	A0A0B4J1Y9	119 aa		7.89	□□□□□ -1.15
SIN3A-205	ENST00000564778		H7C2Y5	167 aa		7.89	□□□□□ -1.15
SIN3A-205	ENST00000564778	MOS	P00540	346 aa		7.89	□□□□□ -1.15
SIN3A-205	ENST00000564778	HRAS	P01112	189 aa		7.89	□□□□□ -1.15
SIN3A-205	ENST00000564778	IGKV1D-33	P01593	117 aa		7.89	□□□□□ -1.15
SIN3A-205	ENST00000564778	IGKV1-33	P01594	117 aa		7.89	□□□□□ -1.15
SIN3A-205	ENST00000564778	IGLV2-23	P01705	113 aa		7.89	□□□□□ -1.15
SIN3A-205	ENST00000564778	SNRNP70	P08621	437 aa	Known RBP	7.89	□□□□□ -1.15
SIN3A-205	ENST00000564778	PAX6	P26367	422 aa		7.89	□□□□□ -1.15
SIN3A-205	ENST00000564778	LGALS7	P47929	136 aa		7.89	□□□□□ -1.15
SIN3A-205	ENST00000564778	LIN54	Q6MZP7	749 aa		7.89	□□□□□ -1.15
SIN3A-205	ENST00000564778	LYZL2	Q7Z4W2	148 aa		7.89	□□□□□ -1.15
SIN3A-205	ENST00000564778	FAM219A	Q8IW50	185 aa		7.89	□□□□□ -1.15
SIN3A-205	ENST00000564778	BCL6B	Q8N143	479 aa	Predicted RBP	7.89	□□□□□ -1.15
SIN3A-205	ENST00000564778	OR2T10	Q8NGZ9	312 aa		7.89	□□□□□ -1.15
SIN3A-205	ENST00000564778	PIFO	Q8TCI5	191 aa		7.89	□□□□□ -1.15
SIN3A-205	ENST00000564778	R3HDM4	Q96D70	268 aa		7.89	□□□□□ -1.15
SIN3A-205	ENST00000564778	EAF1	Q96JC9	268 aa	Predicted RBP	7.89	□□□□□ -1.15
SIN3A-205	ENST00000564778	AIFM2	Q9BRQ8	373 aa		7.89	□□□□□ -1.15
SIN3A-205	ENST00000564778	MED28	Q9H204	178 aa		7.89	□□□□□ -1.15
SIN3A-205	ENST00000564778	SOX21	Q9Y651	276 aa	Predicted RBP	7.89	□□□□□ -1.15
SIN3A-205	ENST00000564778	SRRM4	A7MD48	611 aa	Known RBP	7.88	□□□□□ -1.15
SIN3A-205	ENST00000564778	INAFM1	C9JVW0	142 aa		7.88	□□□□□ -1.15
SIN3A-205	ENST00000564778	SHOX	O15266	292 aa		7.88	□□□□□ -1.15
SIN3A-205	ENST00000564778	ADAP1	O75689	374 aa		7.88	□□□□□ -1.15
SIN3A-205	ENST00000564778	NDUFA3	O95167	84 aa		7.88	□□□□□ -1.15
SIN3A-205	ENST00000564778	IL6R	P08887	468 aa	Predicted RBP	7.88	□□□□□ -1.15
SIN3A-205	ENST00000564778	FGF2	P09038	288 aa		7.88	□□□□□ -1.15
SIN3A-205	ENST00000564778	FAM106CP	P0CH98	169 aa		7.88	□□□□□ -1.15
SIN3A-205	ENST00000564778	SLC25A6	P12236	298 aa		7.88	□□□□□ -1.15
SIN3A-205	ENST00000564778	BCAP31	P51572	246 aa		7.88	□□□□□ -1.15
SIN3A-205	ENST00000564778	AKR1C2	P52895	323 aa		7.88	□□□□□ -1.15
SIN3A-205	ENST00000564778	UBE2K	P61086	200 aa		7.88	□□□□□ -1.15
SIN3A-205	ENST00000564778	ERVK-16	P61578	105 aa		7.88	□□□□□ -1.15
SIN3A-205	ENST00000564778	SCGB2A2	Q13296	93 aa		7.88	□□□□□ -1.15
SIN3A-205	ENST00000564778	FCN2	Q15485	313 aa		7.88	□□□□□ -1.15
SIN3A-205	ENST00000564778	C2orf68	Q2NKX9	166 aa		7.88	□□□□□ -1.15
SIN3A-205	ENST00000564778	DEFB112	Q30KQ8	113 aa		7.88	□□□□□ -1.15
SIN3A-205	ENST00000564778	AARD	Q4LEZ3	155 aa		7.88	□□□□□ -1.15
SIN3A-205	ENST00000564778	FBLN7	Q53RD9	439 aa		7.88	□□□□□ -1.15
SIN3A-205	ENST00000564778	GGNBP1	Q5YKI7	109 aa		7.88	□□□□□ -1.15
SIN3A-205	ENST00000564778	PUSL1	Q8N0Z8	303 aa	Known RBP	7.88	□□□□□ -1.15
SIN3A-205	ENST00000564778	NPB	Q8NG41	125 aa		7.88	□□□□□ -1.15
SIN3A-205	ENST00000564778	OR8H1	Q8NGG4	311 aa		7.88	□□□□□ -1.15
SIN3A-205	ENST00000564778	ASB13	Q8WXK3	278 aa		7.88	□□□□□ -1.15
SIN3A-205	ENST00000564778	RHOV	Q96L33	236 aa		7.88	□□□□□ -1.15
SIN3A-205	ENST00000564778	ZNF48	Q96MX3	618 aa	Predicted RBP	7.88	□□□□□ -1.15
SIN3A-205	ENST00000564778	TSNAX	Q99598	290 aa	Known RBP	7.88	□□□□□ -1.15
SIN3A-205	ENST00000564778	TMEM140	Q9NV12	185 aa		7.88	□□□□□ -1.15
SIN3A-205	ENST00000564778	COA4	Q9NYJ1	87 aa		7.88	□□□□□ -1.15
SIN3A-205	ENST00000564778	BET1L	Q9NYM9	111 aa		7.88	□□□□□ -1.15
SIN3A-205	ENST00000564778	CDC42EP3	Q9UKI2	254 aa		7.88	□□□□□ -1.15
SIN3A-205	ENST00000564778	TCF19	Q9Y242	345 aa		7.88	□□□□□ -1.15
SIN3A-205	ENST00000564778	MMP24	Q9Y5R2	645 aa		7.88	□□□□□ -1.15
SIN3A-205	ENST00000564778		A0A0G2JRQ6	117 aa		7.87	□□□□□ -1.15
SIN3A-205	ENST00000564778	MDFIC2	A0A1B0GVS7	189 aa		7.87	□□□□□ -1.15
SIN3A-205	ENST00000564778	HMX3	A6NHT5	357 aa		7.87	□□□□□ -1.15
SIN3A-205	ENST00000564778	GOSR2	O14653	212 aa		7.87	□□□□□ -1.15
SIN3A-205	ENST00000564778	KRAS	P01116	189 aa		7.87	□□□□□ -1.15
SIN3A-205	ENST00000564778	IFNA21	P01568	189 aa		7.87	□□□□□ -1.15
SIN3A-205	ENST00000564778	CRYGB	P07316	175 aa		7.87	□□□□□ -1.15
SIN3A-205	ENST00000564778	HOXB5	P09067	269 aa		7.87	□□□□□ -1.15
SIN3A-205	ENST00000564778	SAA1	P0DJI8	122 aa	Predicted RBP	7.87	□□□□□ -1.15
SIN3A-205	ENST00000564778	TMEM11	P17152	192 aa		7.87	□□□□□ -1.15
SIN3A-205	ENST00000564778	G6PC	P35575	357 aa		7.87	□□□□□ -1.15
SIN3A-205	ENST00000564778	SRP14	P37108	136 aa	Known RBP	7.87	□□□□□ -1.15
SIN3A-205	ENST00000564778	RPS16	P62249	146 aa	Known RBP	7.87	□□□□□ -1.15
SIN3A-205	ENST00000564778	SRSF4	Q08170	494 aa	Known RBP	7.87	□□□□□ -1.15
SIN3A-205	ENST00000564778	OR4A47	Q6IF82	309 aa		7.87	□□□□□ -1.15
SIN3A-205	ENST00000564778	IL17REL	Q6ZVW7	336 aa		7.87	□□□□□ -1.15
SIN3A-205	ENST00000564778	FOXRED2	Q8IWF2	684 aa		7.87	□□□□□ -1.15
SIN3A-205	ENST00000564778	OR11H7	Q8NGC8	314 aa		7.87	□□□□□ -1.15
SIN3A-205	ENST00000564778	OR4A5	Q8NH83	315 aa		7.87	□□□□□ -1.15
SIN3A-205	ENST00000564778	OR5R1	Q8NH85	324 aa		7.87	□□□□□ -1.15
SIN3A-205	ENST00000564778	VSTM2A	Q8TAG5	236 aa		7.87	□□□□□ -1.15
SIN3A-205	ENST00000564778	RRNAD1	Q96FB5	475 aa	Known RBP	7.87	□□□□□ -1.15
SIN3A-205	ENST00000564778	RITA1	Q96K30	269 aa		7.87	□□□□□ -1.15
SIN3A-205	ENST00000564778	SPIN2A	Q99865	258 aa		7.87	□□□□□ -1.15
SIN3A-205	ENST00000564778	SSX3	Q99909	188 aa		7.87	□□□□□ -1.15
SIN3A-205	ENST00000564778	SPIN2B	Q9BPZ2	258 aa		7.87	□□□□□ -1.15
SIN3A-205	ENST00000564778	MGAT4C	Q9UBM8	478 aa		7.87	□□□□□ -1.15
SIN3A-205	ENST00000564778	hCG_2014768	A0A024R1R8	64 aa		7.86	□□□□□ -1.15
SIN3A-205	ENST00000564778		A0A1B0GU03	582 aa		7.86	□□□□□ -1.15
SIN3A-205	ENST00000564778		A6NDX4	124 aa		7.86	□□□□□ -1.15
SIN3A-205	ENST00000564778	MPTX1	A8MV57	137 aa		7.86	□□□□□ -1.15
SIN3A-205	ENST00000564778		H3BUX3	64 aa		7.86	□□□□□ -1.15
SIN3A-205	ENST00000564778	CCS	O14618	274 aa		7.86	□□□□□ -1.15
SIN3A-205	ENST00000564778	NBR2	O15453	112 aa		7.86	□□□□□ -1.15
SIN3A-205	ENST00000564778	PITX3	O75364	302 aa		7.86	□□□□□ -1.15
SIN3A-205	ENST00000564778	KBTBD11	O94819	623 aa		7.86	□□□□□ -1.15
SIN3A-205	ENST00000564778	OR2F2	O95006	317 aa		7.86	□□□□□ -1.15
SIN3A-205	ENST00000564778	OR2A4	O95047	310 aa		7.86	□□□□□ -1.15
SIN3A-205	ENST00000564778	CXCL3	P19876	107 aa		7.86	□□□□□ -1.15
SIN3A-205	ENST00000564778	CD24	P25063	80 aa		7.86	□□□□□ -1.15
SIN3A-205	ENST00000564778	IER3	P46695	156 aa		7.86	□□□□□ -1.15
SIN3A-205	ENST00000564778	H2BFS	P57053	126 aa		7.86	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms