RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 SLC25A38Q96DW6 304 aa13.57□□□□□ -0.24
NME3-205ENST00000563854 ZNF430Q9H8G1 570 aaPredicted RBP13.57□□□□□ -0.24
NME3-205ENST00000563854 SPATA2Q9UM82 520 aa13.57□□□□□ -0.24
NME3-205ENST00000563854 NBEAL2Q6ZNJ1 2754 aa13.57□□□□□ -0.24
NME3-205ENST00000563854 CREBL2O60519 120 aaPredicted RBP13.56□□□□□ -0.24
NME3-205ENST00000563854 HLA-DQB1P01920 261 aa13.56□□□□□ -0.24
NME3-205ENST00000563854 PRH1P02810 166 aa13.56□□□□□ -0.24
NME3-205ENST00000563854 OR9G9P0C7N8 305 aa13.56□□□□□ -0.24
NME3-205ENST00000563854 AADACP22760 399 aa13.56□□□□□ -0.24
NME3-205ENST00000563854 RPL30P62888 115 aaKnown RBP13.56□□□□□ -0.24
NME3-205ENST00000563854 CDK10Q15131 360 aa13.56□□□□□ -0.24
NME3-205ENST00000563854 VKORC1L1Q8N0U8 176 aa13.56□□□□□ -0.24
NME3-205ENST00000563854 TAS2R8Q9NYW2 309 aa13.56□□□□□ -0.24
NME3-205ENST00000563854 ETV7Q9Y603 341 aa13.56□□□□□ -0.24
NME3-205ENST00000563854 KMT2CQ8NEZ4 4911 aaKnown RBP13.56□□□□□ -0.24
NME3-205ENST00000563854 TRIM64CA6NLI5 447 aa13.55□□□□□ -0.24
NME3-205ENST00000563854 SLC22A5O76082 557 aa13.55□□□□□ -0.24
NME3-205ENST00000563854 TRBV12-3P01733 135 aa13.55□□□□□ -0.24
NME3-205ENST00000563854 PTHLHP12272 177 aa13.55□□□□□ -0.24
NME3-205ENST00000563854 SYNJ2BPP57105 145 aa13.55□□□□□ -0.24
NME3-205ENST00000563854 DYRK1AQ13627 763 aa13.55□□□□□ -0.24
NME3-205ENST00000563854 GVQW1Q8N7I0 195 aa13.55□□□□□ -0.24
NME3-205ENST00000563854 ADAD2Q8NCV1 583 aaKnown RBP13.55□□□□□ -0.24
NME3-205ENST00000563854 BEST4Q8NFU0 473 aa13.55□□□□□ -0.24
NME3-205ENST00000563854 SECTM1Q8WVN6 248 aa13.55□□□□□ -0.24
NME3-205ENST00000563854 GPHA2Q96T91 129 aa13.55□□□□□ -0.24
NME3-205ENST00000563854 PEF1Q9UBV8 284 aaKnown RBP13.55□□□□□ -0.24
NME3-205ENST00000563854 ADAM30Q9UKF2 790 aa13.55□□□□□ -0.24
NME3-205ENST00000563854 TNFSF12O43508 249 aa13.54□□□□□ -0.24
NME3-205ENST00000563854 IGLV2-14P01704 120 aa13.54□□□□□ -0.24
NME3-205ENST00000563854 KCTD21Q4G0X4 260 aa13.54□□□□□ -0.24
NME3-205ENST00000563854 SBSPONQ8IVN8 264 aa13.54□□□□□ -0.24
NME3-205ENST00000563854 MMD2Q8IY49 270 aa13.54□□□□□ -0.24
NME3-205ENST00000563854 OR4S2Q8NH73 311 aa13.54□□□□□ -0.24
NME3-205ENST00000563854 USMG5Q96IX5 58 aa13.54□□□□□ -0.24
NME3-205ENST00000563854 HSD17B10Q99714 261 aaKnown RBP13.54□□□□□ -0.24
NME3-205ENST00000563854 MEIS3P1A6NDR6 274 aa13.53□□□□□ -0.24
NME3-205ENST00000563854 RBMXL2O75526 392 aaKnown RBP13.53□□□□□ -0.24
NME3-205ENST00000563854 FRMD6-AS1P0C7T7 363 aa13.53□□□□□ -0.24
NME3-205ENST00000563854 FCGR2CP31995 323 aa13.53□□□□□ -0.24
NME3-205ENST00000563854 SCAND1P57086 179 aa13.53□□□□□ -0.24
NME3-205ENST00000563854 RHOGP84095 191 aa13.53□□□□□ -0.24
NME3-205ENST00000563854 EXOSC2Q13868 293 aaKnown RBP13.53□□□□□ -0.24
NME3-205ENST00000563854 RPEL1Q2QD12 228 aa13.53□□□□□ -0.24
NME3-205ENST00000563854 ZNF343Q6P1L6 599 aa13.53□□□□□ -0.24
NME3-205ENST00000563854 SSX9Q7RTT3 188 aa13.53□□□□□ -0.24
NME3-205ENST00000563854 OR9G4Q8NGQ1 327 aa13.53□□□□□ -0.24
NME3-205ENST00000563854 OR13F1Q8NGS4 319 aa13.53□□□□□ -0.24
NME3-205ENST00000563854 SPIN2AQ99865 258 aa13.53□□□□□ -0.24
NME3-205ENST00000563854 SPIN2BQ9BPZ2 258 aa13.53□□□□□ -0.24
NME3-205ENST00000563854 AKIP1Q9NQ31 210 aa13.53□□□□□ -0.24
NME3-205ENST00000563854 DIABLOQ9NR28 239 aa13.53□□□□□ -0.24
NME3-205ENST00000563854 HMX3A6NHT5 357 aa13.52□□□□□ -0.25
NME3-205ENST00000563854 IGLV1-51P01701 117 aa13.52□□□□□ -0.25
NME3-205ENST00000563854 TGFBR1P36897 503 aa13.52□□□□□ -0.25
NME3-205ENST00000563854 FXYD4P59646 89 aa13.52□□□□□ -0.25
NME3-205ENST00000563854 KLF5Q13887 457 aaPredicted RBP13.52□□□□□ -0.25
NME3-205ENST00000563854 MFSD4AQ8N468 514 aa13.52□□□□□ -0.25
NME3-205ENST00000563854 FYTTD1Q96QD9 318 aaKnown RBP13.52□□□□□ -0.25
NME3-205ENST00000563854 CCL28Q9NRJ3 127 aa13.52□□□□□ -0.25
NME3-205ENST00000563854 SORL1Q92673 2214 aa13.52□□□□□ -0.25
NME3-205ENST00000563854 DPPA5A6NC42 116 aa13.51□□□□□ -0.25
NME3-205ENST00000563854 FAM223BA6NKX1 122 aa13.51□□□□□ -0.25
NME3-205ENST00000563854 OR2A4O95047 310 aa13.51□□□□□ -0.25
NME3-205ENST00000563854 BRI3O95415 125 aa13.51□□□□□ -0.25
NME3-205ENST00000563854 ZNF45Q02386 682 aa13.51□□□□□ -0.25
NME3-205ENST00000563854 ATP5G2Q06055 141 aa13.51□□□□□ -0.25
NME3-205ENST00000563854 TATDN3Q17R31 274 aa13.51□□□□□ -0.25
NME3-205ENST00000563854 C19orf35Q6ZS72 473 aa13.51□□□□□ -0.25
NME3-205ENST00000563854 HOGA1Q86XE5 327 aa13.51□□□□□ -0.25
NME3-205ENST00000563854 FAM223AQ8IWN6 122 aa13.51□□□□□ -0.25
NME3-205ENST00000563854 VSTM2AQ8TAG5 236 aa13.51□□□□□ -0.25
NME3-205ENST00000563854 OR2A7Q96R45 310 aa13.51□□□□□ -0.25
NME3-205ENST00000563854 AUNIPQ9H7T9 357 aa13.51□□□□□ -0.25
NME3-205ENST00000563854 A0A0A6YYH2 397 aa13.5□□□□□ -0.25
NME3-205ENST00000563854 A6NJ64 397 aa13.5□□□□□ -0.25
NME3-205ENST00000563854 OR2J3O76001 311 aa13.5□□□□□ -0.25
NME3-205ENST00000563854 KBTBD11O94819 623 aa13.5□□□□□ -0.25
NME3-205ENST00000563854 RPL27AP46776 148 aaKnown RBP13.5□□□□□ -0.25
NME3-205ENST00000563854 LSM3P62310 102 aaKnown RBP13.5□□□□□ -0.25
NME3-205ENST00000563854 EIF4EBP1Q13541 118 aaPredicted RBP13.5□□□□□ -0.25
NME3-205ENST00000563854 TIMM50Q3ZCQ8 353 aa13.5□□□□□ -0.25
NME3-205ENST00000563854 ZNF66Q6ZN08 573 aa13.5□□□□□ -0.25
NME3-205ENST00000563854 SNAPC3Q92966 411 aa13.5□□□□□ -0.25
NME3-205ENST00000563854 RCHY1Q96PM5 261 aa13.5□□□□□ -0.25
NME3-205ENST00000563854 SLC5A7Q9GZV3 580 aa13.5□□□□□ -0.25
NME3-205ENST00000563854 IFT46Q9NQC8 304 aa13.5□□□□□ -0.25
NME3-205ENST00000563854 TENM3Q9P273 2699 aa13.5□□□□□ -0.25
NME3-205ENST00000563854 AIREO43918 545 aa13.49□□□□□ -0.25
NME3-205ENST00000563854 PPYP01298 95 aa13.49□□□□□ -0.25
NME3-205ENST00000563854 SLC25A42Q86VD7 318 aa13.49□□□□□ -0.25
NME3-205ENST00000563854 TMEM17Q86X19 198 aa13.49□□□□□ -0.25
NME3-205ENST00000563854 SGPP2Q8IWX5 399 aa13.49□□□□□ -0.25
NME3-205ENST00000563854 VCX3AQ9NNX9 186 aa13.49□□□□□ -0.25
NME3-205ENST00000563854 TEX22C9J3V5 150 aa13.48□□□□□ -0.25
NME3-205ENST00000563854 BMPR1BO00238 502 aa13.48□□□□□ -0.25
NME3-205ENST00000563854 SULT1C2O00338 296 aa13.48□□□□□ -0.25
NME3-205ENST00000563854 HRASP01112 189 aa13.48□□□□□ -0.25
NME3-205ENST00000563854 IGHV4-30-4P0DP06 118 aa13.48□□□□□ -0.25
NME3-205ENST00000563854 MYOD1P15172 320 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms