RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 FOXB1Q99853 325 aa10.76□□□□□ -0.69
CCDC187-201ENST00000563590 PSMG3Q9BT73 122 aaPredicted RBP10.76□□□□□ -0.69
CCDC187-201ENST00000563590 FBXL7Q9UJT9 491 aa10.76□□□□□ -0.69
CCDC187-201ENST00000563590 ATP23Q9Y6H3 246 aa10.76□□□□□ -0.69
CCDC187-201ENST00000563590 COL5A1P20908 1838 aaPredicted RBP10.76□□□□□ -0.69
CCDC187-201ENST00000563590 IL6RP08887 468 aaPredicted RBP10.76□□□□□ -0.69
CCDC187-201ENST00000563590 RELBQ01201 579 aa10.76□□□□□ -0.69
CCDC187-201ENST00000563590 ASPHD1Q5U4P2 390 aa10.76□□□□□ -0.69
CCDC187-201ENST00000563590 RNASEKQ6P5S7 137 aaKnown RBP10.76□□□□□ -0.69
CCDC187-201ENST00000563590 Q6ZSR3 168 aa10.76□□□□□ -0.69
CCDC187-201ENST00000563590 KMT5CQ86Y97 462 aa10.76□□□□□ -0.69
CCDC187-201ENST00000563590 KLHDC1Q8N7A1 406 aa10.76□□□□□ -0.69
CCDC187-201ENST00000563590 SRXN1Q9BYN0 137 aa10.76□□□□□ -0.69
CCDC187-201ENST00000563590 NRN1Q9NPD7 142 aa10.76□□□□□ -0.69
CCDC187-201ENST00000563590 SLC35D1Q9NTN3 355 aa10.76□□□□□ -0.69
CCDC187-201ENST00000563590 LIN7CQ9NUP9 197 aaKnown RBP10.76□□□□□ -0.69
CCDC187-201ENST00000563590 WASHC3Q9Y3C0 194 aa10.76□□□□□ -0.69
CCDC187-201ENST00000563590 PXMP4Q9Y6I8 212 aa10.76□□□□□ -0.69
CCDC187-201ENST00000563590 IGHV3-43A0A0B4J1X8 118 aa10.75□□□□□ -0.69
CCDC187-201ENST00000563590 TFF1P04155 84 aa10.75□□□□□ -0.69
CCDC187-201ENST00000563590 IGHV3-43DP0DP04 118 aa10.75□□□□□ -0.69
CCDC187-201ENST00000563590 SRIP30626 198 aa10.75□□□□□ -0.69
CCDC187-201ENST00000563590 PLP2Q04941 152 aa10.75□□□□□ -0.69
CCDC187-201ENST00000563590 COA6Q5JTJ3 125 aaKnown RBP10.75□□□□□ -0.69
CCDC187-201ENST00000563590 C10orf128Q5T292 105 aa10.75□□□□□ -0.69
CCDC187-201ENST00000563590 PRR27Q6MZM9 219 aa10.75□□□□□ -0.69
CCDC187-201ENST00000563590 TCTEX1D1Q8N7M0 179 aa10.75□□□□□ -0.69
CCDC187-201ENST00000563590 IGF2RP11717 2491 aa10.75□□□□□ -0.69
CCDC187-201ENST00000563590 C10orf142B7Z368 130 aa10.75□□□□□ -0.69
CCDC187-201ENST00000563590 GAGE1Q13065 139 aa10.75□□□□□ -0.69
CCDC187-201ENST00000563590 HES3Q5TGS1 186 aa10.75□□□□□ -0.69
CCDC187-201ENST00000563590 ZNF295-AS1Q8N0V1 137 aa10.75□□□□□ -0.69
CCDC187-201ENST00000563590 NHLRC2Q8NBF2 726 aa10.75□□□□□ -0.69
CCDC187-201ENST00000563590 STRADBQ9C0K7 418 aa10.75□□□□□ -0.69
CCDC187-201ENST00000563590 ATG2AQ2TAZ0 1938 aa10.75□□□□□ -0.69
CCDC187-201ENST00000563590 RBFOX2O43251 390 aaKnown RBP eCLIP10.75□□□□□ -0.69
CCDC187-201ENST00000563590 ARL14EPLP0DKL9 152 aa10.75□□□□□ -0.69
CCDC187-201ENST00000563590 LCN2P80188 198 aa10.75□□□□□ -0.69
CCDC187-201ENST00000563590 OR8B8Q15620 311 aa10.75□□□□□ -0.69
CCDC187-201ENST00000563590 STUMQ69YW2 141 aa10.75□□□□□ -0.69
CCDC187-201ENST00000563590 OR4A47Q6IF82 309 aa10.75□□□□□ -0.69
CCDC187-201ENST00000563590 WDR74Q6RFH5 385 aaPredicted RBP10.75□□□□□ -0.69
CCDC187-201ENST00000563590 FGFBP3Q8TAT2 258 aa10.75□□□□□ -0.69
CCDC187-201ENST00000563590 OR5P3Q8WZ94 311 aa10.75□□□□□ -0.69
CCDC187-201ENST00000563590 ABHD14BQ96IU4 210 aa10.75□□□□□ -0.69
CCDC187-201ENST00000563590 OR2D2Q9H210 308 aa10.75□□□□□ -0.69
CCDC187-201ENST00000563590 DEPPQ9NTK1 212 aa10.75□□□□□ -0.69
CCDC187-201ENST00000563590 IGKV1-6A0A0C4DH72 117 aa10.74□□□□□ -0.69
CCDC187-201ENST00000563590 DPRXA6NFQ7 191 aa10.74□□□□□ -0.69
CCDC187-201ENST00000563590 CAMPP49913 170 aa10.74□□□□□ -0.69
CCDC187-201ENST00000563590 DAZAP2Q15038 168 aaPredicted RBP10.74□□□□□ -0.69
CCDC187-201ENST00000563590 DCAF12Q5T6F0 453 aa10.74□□□□□ -0.69
CCDC187-201ENST00000563590 ASCL4Q6XD76 172 aa10.74□□□□□ -0.69
CCDC187-201ENST00000563590 C20orf204Q6ZNR8 217 aa10.74□□□□□ -0.69
CCDC187-201ENST00000563590 DOLPP1Q86YN1 238 aa10.74□□□□□ -0.69
CCDC187-201ENST00000563590 TUSC5Q8IXB3 177 aa10.74□□□□□ -0.69
CCDC187-201ENST00000563590 TPRX1Q8N7U7 411 aa10.74□□□□□ -0.69
CCDC187-201ENST00000563590 OCC1Q8TAD7 63 aa10.74□□□□□ -0.69
CCDC187-201ENST00000563590 TMEM54Q969K7 222 aa10.74□□□□□ -0.69
CCDC187-201ENST00000563590 ELOVL5Q9NYP7 299 aa10.74□□□□□ -0.69
CCDC187-201ENST00000563590 CFAP47Q6ZTR5 3102 aa10.74□□□□□ -0.69
CCDC187-201ENST00000563590 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.74□□□□□ -0.69
CCDC187-201ENST00000563590 IGKV1-5P01602 117 aa10.74□□□□□ -0.69
CCDC187-201ENST00000563590 APOA2P02652 100 aa10.74□□□□□ -0.69
CCDC187-201ENST00000563590 SP9P0CG40 484 aa10.74□□□□□ -0.69
CCDC187-201ENST00000563590 CRYGSP22914 178 aa10.74□□□□□ -0.69
CCDC187-201ENST00000563590 CCL11P51671 97 aa10.74□□□□□ -0.69
CCDC187-201ENST00000563590 KRTCAP3Q53RY4 240 aa10.74□□□□□ -0.69
CCDC187-201ENST00000563590 TPTE2P1Q5T6R2 138 aa10.74□□□□□ -0.69
CCDC187-201ENST00000563590 SPOCK3Q9BQ16 436 aa10.74□□□□□ -0.69
CCDC187-201ENST00000563590 TLN1Q9Y490 2541 aaKnown RBP10.74□□□□□ -0.69
CCDC187-201ENST00000563590 LRP5LA4QPB2 252 aa10.74□□□□□ -0.69
CCDC187-201ENST00000563590 NGFP01138 241 aa10.74□□□□□ -0.69
CCDC187-201ENST00000563590 LINC00205P59089 165 aa10.74□□□□□ -0.69
CCDC187-201ENST00000563590 EDDM3AQ14507 147 aa10.74□□□□□ -0.69
CCDC187-201ENST00000563590 RPEL1Q2QD12 228 aa10.74□□□□□ -0.69
CCDC187-201ENST00000563590 SMIM15Q7Z3B0 74 aa10.74□□□□□ -0.69
CCDC187-201ENST00000563590 C17orf82Q86X59 251 aaPredicted RBP10.74□□□□□ -0.69
CCDC187-201ENST00000563590 HIPK2Q9H2X6 1198 aa10.74□□□□□ -0.69
CCDC187-201ENST00000563590 PLSCR2Q9NRY7 297 aa10.74□□□□□ -0.69
CCDC187-201ENST00000563590 KCNIP1Q9NZI2 227 aa10.74□□□□□ -0.69
CCDC187-201ENST00000563590 DUSP13Q9UII6 198 aa10.74□□□□□ -0.69
CCDC187-201ENST00000563590 RPH3ALQ9UNE2 315 aa10.74□□□□□ -0.69
CCDC187-201ENST00000563590 LOXL2Q9Y4K0 774 aa10.74□□□□□ -0.69
CCDC187-201ENST00000563590 MAGEA5P43359 124 aa10.73□□□□□ -0.69
CCDC187-201ENST00000563590 MIC13Q5XKP0 118 aa10.73□□□□□ -0.69
CCDC187-201ENST00000563590 SAXO1Q8IYX7 474 aa10.73□□□□□ -0.69
CCDC187-201ENST00000563590 OR1L1Q8NH94 360 aa10.73□□□□□ -0.69
CCDC187-201ENST00000563590 RNF138Q8WVD3 245 aa10.73□□□□□ -0.69
CCDC187-201ENST00000563590 RNF2Q99496 336 aa10.73□□□□□ -0.69
CCDC187-201ENST00000563590 PYGO2Q9BRQ0 406 aa10.73□□□□□ -0.69
CCDC187-201ENST00000563590 LRFN3Q9BTN0 628 aa10.73□□□□□ -0.69
CCDC187-201ENST00000563590 QTRT1Q9BXR0 403 aaKnown RBP10.73□□□□□ -0.69
CCDC187-201ENST00000563590 GNB4Q9HAV0 340 aa10.73□□□□□ -0.69
CCDC187-201ENST00000563590 TECRQ9NZ01 308 aaKnown RBP10.73□□□□□ -0.69
CCDC187-201ENST00000563590 EXPH5Q8NEV8 1989 aa10.73□□□□□ -0.69
CCDC187-201ENST00000563590 ANKRD30BLA7E2S9 258 aa10.73□□□□□ -0.69
CCDC187-201ENST00000563590 RAMP3O60896 148 aa10.73□□□□□ -0.69
CCDC187-201ENST00000563590 NPPCP23582 126 aa10.73□□□□□ -0.69
CCDC187-201ENST00000563590 AP1S3Q96PC3 154 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms