RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 SCGB3A2Q96PL1 93 aa12.36□□□□□ -0.43
USB1-208ENST00000563207 RASL11BQ9BPW5 248 aa12.36□□□□□ -0.43
USB1-208ENST00000563207 AIFM2Q9BRQ8 373 aa12.36□□□□□ -0.43
USB1-208ENST00000563207 CCDC32Q9BV29 185 aa12.36□□□□□ -0.43
USB1-208ENST00000563207 AURKAIP1Q9NWT8 199 aaPredicted RBP12.36□□□□□ -0.43
USB1-208ENST00000563207 RBFOX2O43251 390 aaKnown RBP eCLIP12.35□□□□□ -0.43
USB1-208ENST00000563207 IGKV1-16P04430 117 aa12.35□□□□□ -0.43
USB1-208ENST00000563207 CD40LGP29965 261 aa12.35□□□□□ -0.43
USB1-208ENST00000563207 PPP5CP53041 499 aa12.35□□□□□ -0.43
USB1-208ENST00000563207 F2RL1P55085 397 aa12.35□□□□□ -0.43
USB1-208ENST00000563207 RPL30P62888 115 aaKnown RBP12.35□□□□□ -0.43
USB1-208ENST00000563207 BAK1Q16611 211 aa12.35□□□□□ -0.43
USB1-208ENST00000563207 OR4F17Q8NGA8 305 aa12.35□□□□□ -0.43
USB1-208ENST00000563207 OR4S2Q8NH73 311 aa12.35□□□□□ -0.43
USB1-208ENST00000563207 OR4F4Q96R69 305 aa12.35□□□□□ -0.43
USB1-208ENST00000563207 SDHCQ99643 169 aaPredicted RBP12.35□□□□□ -0.43
USB1-208ENST00000563207 WDR12Q9GZL7 423 aaKnown RBP12.35□□□□□ -0.43
USB1-208ENST00000563207 FAM212BQ9NTI7 297 aaPredicted RBP12.35□□□□□ -0.43
USB1-208ENST00000563207 TCRBV4S1A1TA0A5B7 111 aa12.34□□□□□ -0.43
USB1-208ENST00000563207 NAP1L6A6NFF2 107 aa12.34□□□□□ -0.43
USB1-208ENST00000563207 RRHO14718 337 aa12.34□□□□□ -0.43
USB1-208ENST00000563207 SHOXO15266 292 aa12.34□□□□□ -0.43
USB1-208ENST00000563207 FCGR3BO75015 233 aa12.34□□□□□ -0.43
USB1-208ENST00000563207 PGLYRP1O75594 196 aaPredicted RBP12.34□□□□□ -0.43
USB1-208ENST00000563207 PGAM2P15259 253 aa12.34□□□□□ -0.43
USB1-208ENST00000563207 RND3P61587 244 aa12.34□□□□□ -0.43
USB1-208ENST00000563207 C5orf64Q2M2E5 130 aa12.34□□□□□ -0.43
USB1-208ENST00000563207 ZNF57Q68EA5 555 aaPredicted RBP12.34□□□□□ -0.43
USB1-208ENST00000563207 OR51S1Q8NGJ8 323 aa12.34□□□□□ -0.43
USB1-208ENST00000563207 MRAPQ8TCY5 172 aa12.34□□□□□ -0.43
USB1-208ENST00000563207 HARBI1Q96MB7 349 aa12.34□□□□□ -0.43
USB1-208ENST00000563207 C7orf50Q9BRJ6 194 aaKnown RBP12.34□□□□□ -0.43
USB1-208ENST00000563207 HRASLSQ9HDD0 168 aa12.34□□□□□ -0.43
USB1-208ENST00000563207 MCUBQ9NWR8 336 aa12.34□□□□□ -0.43
USB1-208ENST00000563207 CENPXA8MT69 81 aa12.33□□□□□ -0.44
USB1-208ENST00000563207 TNFSF12O43508 249 aa12.33□□□□□ -0.44
USB1-208ENST00000563207 CRYZL1O95825 349 aa12.33□□□□□ -0.44
USB1-208ENST00000563207 IGHG2P01859 326 aa12.33□□□□□ -0.44
USB1-208ENST00000563207 CTSDP07339 412 aaPredicted RBP12.33□□□□□ -0.44
USB1-208ENST00000563207 IL7P13232 177 aa12.33□□□□□ -0.44
USB1-208ENST00000563207 ZNF846Q147U1 533 aa12.33□□□□□ -0.44
USB1-208ENST00000563207 FAAP20Q6NZ36 180 aa12.33□□□□□ -0.44
USB1-208ENST00000563207 IDO2Q6ZQW0 420 aa12.33□□□□□ -0.44
USB1-208ENST00000563207 C18orf65Q6ZTR6 163 aa12.33□□□□□ -0.44
USB1-208ENST00000563207 ZNF329Q86UD4 541 aa12.33□□□□□ -0.44
USB1-208ENST00000563207 CCDC71LQ8N9Z2 235 aa12.33□□□□□ -0.44
USB1-208ENST00000563207 WFDC9Q8NEX5 89 aa12.33□□□□□ -0.44
USB1-208ENST00000563207 RITA1Q96K30 269 aa12.33□□□□□ -0.44
USB1-208ENST00000563207 NOL4LQ96MY1 436 aaPredicted RBP12.33□□□□□ -0.44
USB1-208ENST00000563207 SLC2A9Q9NRM0 540 aa12.33□□□□□ -0.44
USB1-208ENST00000563207 LINC00527Q9UJ94 153 aa12.33□□□□□ -0.44
USB1-208ENST00000563207 COL7A1Q02388 2944 aa12.32□□□□□ -0.44
USB1-208ENST00000563207 LINC01548A6NM66 108 aa12.32□□□□□ -0.44
USB1-208ENST00000563207 B3GALNT1O75752 331 aa12.32□□□□□ -0.44
USB1-208ENST00000563207 HPRT1P00492 218 aa12.32□□□□□ -0.44
USB1-208ENST00000563207 HRASP01112 189 aa12.32□□□□□ -0.44
USB1-208ENST00000563207 HLA-DRB1P01911 266 aa12.32□□□□□ -0.44
USB1-208ENST00000563207 CD33P20138 364 aa12.32□□□□□ -0.44
USB1-208ENST00000563207 F2RP25116 425 aa12.32□□□□□ -0.44
USB1-208ENST00000563207 PLGLAQ15195 96 aa12.32□□□□□ -0.44
USB1-208ENST00000563207 PSG5Q15238 335 aa12.32□□□□□ -0.44
USB1-208ENST00000563207 VMA21Q3ZAQ7 101 aa12.32□□□□□ -0.44
USB1-208ENST00000563207 LIN54Q6MZP7 749 aa12.32□□□□□ -0.44
USB1-208ENST00000563207 SPAG16Q8N0X2 631 aa12.32□□□□□ -0.44
USB1-208ENST00000563207 TEX45Q8NA69 505 aa12.32□□□□□ -0.44
USB1-208ENST00000563207 OR51H1Q8NH63 302 aa12.32□□□□□ -0.44
USB1-208ENST00000563207 MARCH1Q8TCQ1 289 aa12.32□□□□□ -0.44
USB1-208ENST00000563207 SLC25A21Q9BQT8 299 aaPredicted RBP12.32□□□□□ -0.44
USB1-208ENST00000563207 GPR132Q9UNW8 380 aa12.32□□□□□ -0.44
USB1-208ENST00000563207 C14orf166Q9Y224 244 aaKnown RBP12.32□□□□□ -0.44
USB1-208ENST00000563207 MPPED1O15442 326 aa12.31□□□□□ -0.44
USB1-208ENST00000563207 RLN1P04808 185 aa12.31□□□□□ -0.44
USB1-208ENST00000563207 PF4V1P10720 104 aa12.31□□□□□ -0.44
USB1-208ENST00000563207 CNTFRP26992 372 aa12.31□□□□□ -0.44
USB1-208ENST00000563207 PIGPP57054 158 aa12.31□□□□□ -0.44
USB1-208ENST00000563207 BRWD1-AS2P59051 145 aa12.31□□□□□ -0.44
USB1-208ENST00000563207 KRTAP10-11P60412 298 aa12.31□□□□□ -0.44
USB1-208ENST00000563207 UBE2KP61086 200 aa12.31□□□□□ -0.44
USB1-208ENST00000563207 PHLDA2Q53GA4 152 aa12.31□□□□□ -0.44
USB1-208ENST00000563207 KHDC1LQ5JSQ8 128 aa12.31□□□□□ -0.44
USB1-208ENST00000563207 FOXRED2Q8IWF2 684 aa12.31□□□□□ -0.44
USB1-208ENST00000563207 OR13C8Q8NGS7 320 aa12.31□□□□□ -0.44
USB1-208ENST00000563207 VSTM2AQ8TAG5 236 aa12.31□□□□□ -0.44
USB1-208ENST00000563207 MRGPRFQ96AM1 343 aa12.31□□□□□ -0.44
USB1-208ENST00000563207 PLEKHA2Q9HB19 425 aa12.31□□□□□ -0.44
USB1-208ENST00000563207 COPZ2Q9P299 210 aa12.31□□□□□ -0.44
USB1-208ENST00000563207 METTL1Q9UBP6 276 aaKnown RBP12.31□□□□□ -0.44
USB1-208ENST00000563207 ZNF580Q9UK33 172 aa12.31□□□□□ -0.44
USB1-208ENST00000563207 CREBL2O60519 120 aaPredicted RBP12.3□□□□□ -0.44
USB1-208ENST00000563207 IGLV2-23P01705 113 aa12.3□□□□□ -0.44
USB1-208ENST00000563207 TAS2R31P59538 309 aa12.3□□□□□ -0.44
USB1-208ENST00000563207 ETV3LQ6ZN32 361 aa12.3□□□□□ -0.44
USB1-208ENST00000563207 SLC35E3Q7Z769 313 aa12.3□□□□□ -0.44
USB1-208ENST00000563207 TBC1D26Q86UD7 250 aa12.3□□□□□ -0.44
USB1-208ENST00000563207 PPP1R27Q86WC6 154 aa12.3□□□□□ -0.44
USB1-208ENST00000563207 CADM3Q8N126 398 aa12.3□□□□□ -0.44
USB1-208ENST00000563207 GPHA2Q96T91 129 aa12.3□□□□□ -0.44
USB1-208ENST00000563207 GON7Q9BXV9 100 aa12.3□□□□□ -0.44
USB1-208ENST00000563207 FBXL15Q9H469 300 aa12.3□□□□□ -0.44
USB1-208ENST00000563207 COMMD9Q9P000 198 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms