RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 SECTM1Q8WVN6 248 aa13.79□□□□□ -0.2
CMTM3-204ENST00000562357 RHOVQ96L33 236 aa13.79□□□□□ -0.2
CMTM3-204ENST00000562357 SPIN2AQ99865 258 aa13.79□□□□□ -0.2
CMTM3-204ENST00000562357 SPIN2BQ9BPZ2 258 aa13.79□□□□□ -0.2
CMTM3-204ENST00000562357 COA4Q9NYJ1 87 aa13.79□□□□□ -0.2
CMTM3-204ENST00000562357 TAS2R8Q9NYW2 309 aa13.79□□□□□ -0.2
CMTM3-204ENST00000562357 MSGN1A6NI15 193 aa13.78□□□□□ -0.2
CMTM3-204ENST00000562357 SAP30O75446 220 aa13.78□□□□□ -0.2
CMTM3-204ENST00000562357 LY86O95711 162 aa13.78□□□□□ -0.2
CMTM3-204ENST00000562357 SAA1P0DJI8 122 aaPredicted RBP13.78□□□□□ -0.2
CMTM3-204ENST00000562357 ZP3P21754 424 aa13.78□□□□□ -0.2
CMTM3-204ENST00000562357 TGFBR1P36897 503 aa13.78□□□□□ -0.2
CMTM3-204ENST00000562357 KIR2DS2P43631 304 aa13.78□□□□□ -0.2
CMTM3-204ENST00000562357 SSBP2P81877 361 aaPredicted RBP13.78□□□□□ -0.2
CMTM3-204ENST00000562357 MSMO1Q15800 293 aa13.78□□□□□ -0.2
CMTM3-204ENST00000562357 ZBTB34Q8NCN2 500 aa13.78□□□□□ -0.2
CMTM3-204ENST00000562357 SRSF12Q8WXF0 261 aaKnown RBP13.78□□□□□ -0.2
CMTM3-204ENST00000562357 DLX4Q92988 240 aaPredicted RBP13.78□□□□□ -0.2
CMTM3-204ENST00000562357 BORCS5Q969J3 196 aa13.78□□□□□ -0.2
CMTM3-204ENST00000562357 KCTD12Q96CX2 325 aaKnown RBP13.78□□□□□ -0.2
CMTM3-204ENST00000562357 AIFM2Q9BRQ8 373 aa13.78□□□□□ -0.2
CMTM3-204ENST00000562357 RANGRFQ9HD47 186 aaPredicted RBP13.78□□□□□ -0.2
CMTM3-204ENST00000562357 ZNF256Q9Y2P7 627 aaPredicted RBP13.78□□□□□ -0.2
CMTM3-204ENST00000562357 PPYP01298 95 aa13.77□□□□□ -0.21
CMTM3-204ENST00000562357 FCER2P06734 321 aa13.77□□□□□ -0.21
CMTM3-204ENST00000562357 HERV-K104P61576 105 aa13.77□□□□□ -0.21
CMTM3-204ENST00000562357 RPL30P62888 115 aaKnown RBP13.77□□□□□ -0.21
CMTM3-204ENST00000562357 CATR1Q13166 79 aa13.77□□□□□ -0.21
CMTM3-204ENST00000562357 MFSD4AQ8N468 514 aa13.77□□□□□ -0.21
CMTM3-204ENST00000562357 OR5AP2Q8NGF4 316 aa13.77□□□□□ -0.21
CMTM3-204ENST00000562357 SLC25A46Q96AG3 418 aa13.77□□□□□ -0.21
CMTM3-204ENST00000562357 OR4C12Q96R67 309 aa13.77□□□□□ -0.21
CMTM3-204ENST00000562357 ELOVL1Q9BW60 279 aa13.77□□□□□ -0.21
CMTM3-204ENST00000562357 TINAGL1Q9GZM7 467 aaPredicted RBP13.77□□□□□ -0.21
CMTM3-204ENST00000562357 SLC5A7Q9GZV3 580 aa13.77□□□□□ -0.21
CMTM3-204ENST00000562357 ZNF430Q9H8G1 570 aaPredicted RBP13.77□□□□□ -0.21
CMTM3-204ENST00000562357 SCOCQ9UIL1 159 aa13.77□□□□□ -0.21
CMTM3-204ENST00000562357 SMIM31A0A1B0GVY4 71 aa13.76□□□□□ -0.21
CMTM3-204ENST00000562357 OR2A4O95047 310 aa13.76□□□□□ -0.21
CMTM3-204ENST00000562357 BRI3O95415 125 aa13.76□□□□□ -0.21
CMTM3-204ENST00000562357 HRASP01112 189 aa13.76□□□□□ -0.21
CMTM3-204ENST00000562357 IGLV2-14P01704 120 aa13.76□□□□□ -0.21
CMTM3-204ENST00000562357 OR9G9P0C7N8 305 aa13.76□□□□□ -0.21
CMTM3-204ENST00000562357 APELAP0DMC3 54 aa13.76□□□□□ -0.21
CMTM3-204ENST00000562357 PTHLHP12272 177 aa13.76□□□□□ -0.21
CMTM3-204ENST00000562357 FXYD4P59646 89 aa13.76□□□□□ -0.21
CMTM3-204ENST00000562357 USMG5Q96IX5 58 aa13.76□□□□□ -0.21
CMTM3-204ENST00000562357 OR2A7Q96R45 310 aa13.76□□□□□ -0.21
CMTM3-204ENST00000562357 PRR25Q96S07 402 aa13.76□□□□□ -0.21
CMTM3-204ENST00000562357 FUNDC2Q9BWH2 189 aa13.76□□□□□ -0.21
CMTM3-204ENST00000562357 MEIS3P1A6NDR6 274 aa13.75□□□□□ -0.21
CMTM3-204ENST00000562357 TAS2R46P59540 309 aa13.75□□□□□ -0.21
CMTM3-204ENST00000562357 TAS2R20P59543 309 aa13.75□□□□□ -0.21
CMTM3-204ENST00000562357 SLC25A42Q86VD7 318 aa13.75□□□□□ -0.21
CMTM3-204ENST00000562357 TMEM17Q86X19 198 aa13.75□□□□□ -0.21
CMTM3-204ENST00000562357 OR6Q1Q8NGQ2 317 aa13.75□□□□□ -0.21
CMTM3-204ENST00000562357 B9D2Q9BPU9 175 aa13.75□□□□□ -0.21
CMTM3-204ENST00000562357 CCL28Q9NRJ3 127 aa13.75□□□□□ -0.21
CMTM3-204ENST00000562357 EHFQ9NZC4 300 aa13.75□□□□□ -0.21
CMTM3-204ENST00000562357 ANKRD34BA5PLL1 514 aa13.74□□□□□ -0.21
CMTM3-204ENST00000562357 DPPA5A6NC42 116 aa13.74□□□□□ -0.21
CMTM3-204ENST00000562357 TRIM64CA6NLI5 447 aa13.74□□□□□ -0.21
CMTM3-204ENST00000562357 TNFSF12O43508 249 aa13.74□□□□□ -0.21
CMTM3-204ENST00000562357 PRSS3P35030 304 aa13.74□□□□□ -0.21
CMTM3-204ENST00000562357 NCS1P62166 190 aa13.74□□□□□ -0.21
CMTM3-204ENST00000562357 VKORC1L1Q8N0U8 176 aa13.74□□□□□ -0.21
CMTM3-204ENST00000562357 ADAD2Q8NCV1 583 aaKnown RBP13.74□□□□□ -0.21
CMTM3-204ENST00000562357 OR5H2Q8NGV7 314 aa13.74□□□□□ -0.21
CMTM3-204ENST00000562357 GIMAP1Q8WWP7 306 aa13.74□□□□□ -0.21
CMTM3-204ENST00000562357 SNAPC3Q92966 411 aa13.74□□□□□ -0.21
CMTM3-204ENST00000562357 FAM223BA6NKX1 122 aa13.73□□□□□ -0.21
CMTM3-204ENST00000562357 KBTBD11O94819 623 aa13.73□□□□□ -0.21
CMTM3-204ENST00000562357 MAS1LP35410 378 aa13.73□□□□□ -0.21
CMTM3-204ENST00000562357 VBP1P61758 197 aa13.73□□□□□ -0.21
CMTM3-204ENST00000562357 EIF4EBP1Q13541 118 aaPredicted RBP13.73□□□□□ -0.21
CMTM3-204ENST00000562357 TATDN3Q17R31 274 aa13.73□□□□□ -0.21
CMTM3-204ENST00000562357 MRGPRG-AS1Q2M3A8 158 aa13.73□□□□□ -0.21
CMTM3-204ENST00000562357 ACSM6Q6P461 480 aa13.73□□□□□ -0.21
CMTM3-204ENST00000562357 FAM223AQ8IWN6 122 aa13.73□□□□□ -0.21
CMTM3-204ENST00000562357 SPAG16Q8N0X2 631 aa13.73□□□□□ -0.21
CMTM3-204ENST00000562357 COMMD3Q9UBI1 195 aa13.73□□□□□ -0.21
CMTM3-204ENST00000562357 PEF1Q9UBV8 284 aaKnown RBP13.73□□□□□ -0.21
CMTM3-204ENST00000562357 DNAH3Q8TD57 4116 aa13.73□□□□□ -0.21
CMTM3-204ENST00000562357 RBFOX2O43251 390 aaKnown RBP eCLIP13.72□□□□□ -0.21
CMTM3-204ENST00000562357 APOA1P02647 267 aa13.72□□□□□ -0.21
CMTM3-204ENST00000562357 RPL27AP46776 148 aaKnown RBP13.72□□□□□ -0.21
CMTM3-204ENST00000562357 AADACL3Q5VUY0 350 aa13.72□□□□□ -0.21
CMTM3-204ENST00000562357 MZT2AQ6P582 158 aa13.72□□□□□ -0.21
CMTM3-204ENST00000562357 SSX9Q7RTT3 188 aa13.72□□□□□ -0.21
CMTM3-204ENST00000562357 TMEM167AQ8TBQ9 72 aa13.72□□□□□ -0.21
CMTM3-204ENST00000562357 CD300LFQ8TDQ1 290 aa13.72□□□□□ -0.21
CMTM3-204ENST00000562357 AP3S1Q92572 193 aa13.72□□□□□ -0.21
CMTM3-204ENST00000562357 CMTM3Q96MX0 182 aa13.72□□□□□ -0.21
CMTM3-204ENST00000562357 GPHA2Q96T91 129 aa13.72□□□□□ -0.21
CMTM3-204ENST00000562357 RSRP1Q9BUV0 290 aa13.72□□□□□ -0.21
CMTM3-204ENST00000562357 HRASLSQ9HDD0 168 aa13.72□□□□□ -0.21
CMTM3-204ENST00000562357 SULT1C2O00338 296 aa13.71□□□□□ -0.21
CMTM3-204ENST00000562357 DHFRP00374 187 aa13.71□□□□□ -0.21
CMTM3-204ENST00000562357 RORCP51449 518 aa13.71□□□□□ -0.21
CMTM3-204ENST00000562357 RHOGP84095 191 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms