RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 ANKRD34BA5PLL1 514 aa9.72□□□□□ -0.85
CHRNA3-208ENST00000561128 HMX3A6NHT5 357 aa9.72□□□□□ -0.85
CHRNA3-208ENST00000561128 MSGN1A6NI15 193 aa9.72□□□□□ -0.85
CHRNA3-208ENST00000561128 A6NJ64 397 aa9.72□□□□□ -0.85
CHRNA3-208ENST00000561128 CGB1A6NKQ9 187 aa9.72□□□□□ -0.85
CHRNA3-208ENST00000561128 TEX22C9J3V5 150 aa9.72□□□□□ -0.85
CHRNA3-208ENST00000561128 LINC01619G3V211 115 aa9.72□□□□□ -0.85
CHRNA3-208ENST00000561128 OVOL1O14753 267 aa9.72□□□□□ -0.85
CHRNA3-208ENST00000561128 XRCC3O43542 346 aa9.72□□□□□ -0.85
CHRNA3-208ENST00000561128 CNIH1O95406 144 aa9.72□□□□□ -0.85
CHRNA3-208ENST00000561128 PPYP01298 95 aa9.72□□□□□ -0.85
CHRNA3-208ENST00000561128 CTXN2P0C2S0 81 aa9.72□□□□□ -0.85
CHRNA3-208ENST00000561128 ARPC4P59998 168 aa9.72□□□□□ -0.85
CHRNA3-208ENST00000561128 CDK10Q15131 360 aa9.72□□□□□ -0.85
CHRNA3-208ENST00000561128 TIMM50Q3ZCQ8 353 aa9.72□□□□□ -0.85
CHRNA3-208ENST00000561128 DEFB121Q5J5C9 76 aa9.72□□□□□ -0.85
CHRNA3-208ENST00000561128 TEX45Q8NA69 505 aa9.72□□□□□ -0.85
CHRNA3-208ENST00000561128 ACOT12Q8WYK0 555 aa9.72□□□□□ -0.85
CHRNA3-208ENST00000561128 GPR61Q9BZJ8 451 aa9.72□□□□□ -0.85
CHRNA3-208ENST00000561128 FXYD6Q9H0Q3 95 aa9.72□□□□□ -0.85
CHRNA3-208ENST00000561128 ZNF355PQ9NSJ1 428 aa9.72□□□□□ -0.85
CHRNA3-208ENST00000561128 LSM4Q9Y4Z0 139 aaKnown RBP9.72□□□□□ -0.85
CHRNA3-208ENST00000561128 TNCP24821 2201 aa9.71□□□□□ -0.85
CHRNA3-208ENST00000561128 RRASP10301 218 aa9.71□□□□□ -0.86
CHRNA3-208ENST00000561128 TMEM267Q0VDI3 215 aaPredicted RBP9.71□□□□□ -0.86
CHRNA3-208ENST00000561128 CTF1Q16619 201 aa9.71□□□□□ -0.86
CHRNA3-208ENST00000561128 VMA21Q3ZAQ7 101 aa9.71□□□□□ -0.86
CHRNA3-208ENST00000561128 PYHIN1Q6K0P9 492 aa9.71□□□□□ -0.86
CHRNA3-208ENST00000561128 ZNF818PQ6ZRF7 136 aa9.71□□□□□ -0.86
CHRNA3-208ENST00000561128 SSX9Q7RTT3 188 aa9.71□□□□□ -0.86
CHRNA3-208ENST00000561128 TMEM17Q86X19 198 aa9.71□□□□□ -0.86
CHRNA3-208ENST00000561128 PUSL1Q8N0Z8 303 aaKnown RBP9.71□□□□□ -0.86
CHRNA3-208ENST00000561128 MFSD4AQ8N468 514 aa9.71□□□□□ -0.86
CHRNA3-208ENST00000561128 OSR1Q8TAX0 266 aaPredicted RBP9.71□□□□□ -0.86
CHRNA3-208ENST00000561128 TINAGL1Q9GZM7 467 aaPredicted RBP9.71□□□□□ -0.86
CHRNA3-208ENST00000561128 SLC5A7Q9GZV3 580 aa9.71□□□□□ -0.86
CHRNA3-208ENST00000561128 DIABLOQ9NR28 239 aa9.71□□□□□ -0.86
CHRNA3-208ENST00000561128 COA4Q9NYJ1 87 aa9.71□□□□□ -0.86
CHRNA3-208ENST00000561128 TRAV3A0A0B4J244 114 aa9.7□□□□□ -0.86
CHRNA3-208ENST00000561128 SULT1C2O00338 296 aa9.7□□□□□ -0.86
CHRNA3-208ENST00000561128 HPGDSO60760 199 aa9.7□□□□□ -0.86
CHRNA3-208ENST00000561128 GABARAPO95166 117 aa9.7□□□□□ -0.86
CHRNA3-208ENST00000561128 PMP2P02689 132 aa9.7□□□□□ -0.86
CHRNA3-208ENST00000561128 IL6RP08887 468 aaPredicted RBP9.7□□□□□ -0.86
CHRNA3-208ENST00000561128 EDN2P20800 178 aa9.7□□□□□ -0.86
CHRNA3-208ENST00000561128 RFX2P48378 723 aa9.7□□□□□ -0.86
CHRNA3-208ENST00000561128 CBX3Q13185 183 aa9.7□□□□□ -0.86
CHRNA3-208ENST00000561128 TMEM69Q5SWH9 247 aa9.7□□□□□ -0.86
CHRNA3-208ENST00000561128 ACSM6Q6P461 480 aa9.7□□□□□ -0.86
CHRNA3-208ENST00000561128 OR5AP2Q8NGF4 316 aa9.7□□□□□ -0.86
CHRNA3-208ENST00000561128 HSD17B10Q99714 261 aaKnown RBP9.7□□□□□ -0.86
CHRNA3-208ENST00000561128 DCUN1D5Q9BTE7 237 aa9.7□□□□□ -0.86
CHRNA3-208ENST00000561128 SLA2Q9H6Q3 261 aa9.7□□□□□ -0.86
CHRNA3-208ENST00000561128 VCX3AQ9NNX9 186 aa9.7□□□□□ -0.86
CHRNA3-208ENST00000561128 EHFQ9NZC4 300 aa9.7□□□□□ -0.86
CHRNA3-208ENST00000561128 COMMD3Q9UBI1 195 aa9.7□□□□□ -0.86
CHRNA3-208ENST00000561128 H3BUA1 57 aa9.69□□□□□ -0.86
CHRNA3-208ENST00000561128 SAP30O75446 220 aa9.69□□□□□ -0.86
CHRNA3-208ENST00000561128 KBTBD11O94819 623 aa9.69□□□□□ -0.86
CHRNA3-208ENST00000561128 HSPB1P04792 205 aaKnown RBP9.69□□□□□ -0.86
CHRNA3-208ENST00000561128 OR9G9P0C7N8 305 aa9.69□□□□□ -0.86
CHRNA3-208ENST00000561128 AREGP15514 252 aa9.69□□□□□ -0.86
CHRNA3-208ENST00000561128 SPNP16150 400 aa9.69□□□□□ -0.86
CHRNA3-208ENST00000561128 NAT1P18440 290 aa9.69□□□□□ -0.86
CHRNA3-208ENST00000561128 ELK1P19419 428 aa9.69□□□□□ -0.86
CHRNA3-208ENST00000561128 RNASE12Q5GAN4 147 aaKnown RBP9.69□□□□□ -0.86
CHRNA3-208ENST00000561128 IL34Q6ZMJ4 242 aa9.69□□□□□ -0.86
CHRNA3-208ENST00000561128 OR51H1Q8NH63 302 aa9.69□□□□□ -0.86
CHRNA3-208ENST00000561128 OR4S2Q8NH73 311 aa9.69□□□□□ -0.86
CHRNA3-208ENST00000561128 TMEM167AQ8TBQ9 72 aa9.69□□□□□ -0.86
CHRNA3-208ENST00000561128 PHB2Q99623 299 aa9.69□□□□□ -0.86
CHRNA3-208ENST00000561128 B9D2Q9BPU9 175 aa9.69□□□□□ -0.86
CHRNA3-208ENST00000561128 AKIP1Q9NQ31 210 aa9.69□□□□□ -0.86
CHRNA3-208ENST00000561128 IFT46Q9NQC8 304 aa9.69□□□□□ -0.86
CHRNA3-208ENST00000561128 ZNF256Q9Y2P7 627 aaPredicted RBP9.69□□□□□ -0.86
CHRNA3-208ENST00000561128 PRELID3BQ9Y3B1 194 aa9.69□□□□□ -0.86
CHRNA3-208ENST00000561128 S4R3C0 116 aa9.69□□□□□ -0.86
CHRNA3-208ENST00000561128 S1PR2O95136 353 aa9.68□□□□□ -0.86
CHRNA3-208ENST00000561128 RPA2P15927 270 aa9.68□□□□□ -0.86
CHRNA3-208ENST00000561128 GNRHRP30968 328 aa9.68□□□□□ -0.86
CHRNA3-208ENST00000561128 RHOGP84095 191 aa9.68□□□□□ -0.86
CHRNA3-208ENST00000561128 GPR107Q5VW38 600 aa9.68□□□□□ -0.86
CHRNA3-208ENST00000561128 ZNF343Q6P1L6 599 aa9.68□□□□□ -0.86
CHRNA3-208ENST00000561128 ZNF66Q6ZN08 573 aa9.68□□□□□ -0.86
CHRNA3-208ENST00000561128 SNX29P2Q8IUI4 249 aa9.68□□□□□ -0.86
CHRNA3-208ENST00000561128 LYSMD2Q8IV50 215 aa9.68□□□□□ -0.86
CHRNA3-208ENST00000561128 GPX8Q8TED1 209 aa9.68□□□□□ -0.86
CHRNA3-208ENST00000561128 GIMAP1Q8WWP7 306 aa9.68□□□□□ -0.86
CHRNA3-208ENST00000561128 MRPS7Q9Y2R9 242 aaKnown RBP9.68□□□□□ -0.86
CHRNA3-208ENST00000561128 DMRT1Q9Y5R6 373 aa9.68□□□□□ -0.86
CHRNA3-208ENST00000561128 TRBV9A0A0B4J1U6 114 aa9.67□□□□□ -0.86
CHRNA3-208ENST00000561128 C13orf42A0A1B0GVH6 325 aa9.67□□□□□ -0.86
CHRNA3-208ENST00000561128 BMPR1BO00238 502 aa9.67□□□□□ -0.86
CHRNA3-208ENST00000561128 OR2A4O95047 310 aa9.67□□□□□ -0.86
CHRNA3-208ENST00000561128 BRI3O95415 125 aa9.67□□□□□ -0.86
CHRNA3-208ENST00000561128 LY86O95711 162 aa9.67□□□□□ -0.86
CHRNA3-208ENST00000561128 REG1AP05451 166 aa9.67□□□□□ -0.86
CHRNA3-208ENST00000561128 HLA-DMAP28067 261 aa9.67□□□□□ -0.86
CHRNA3-208ENST00000561128 HRH1P35367 487 aa9.67□□□□□ -0.86
CHRNA3-208ENST00000561128 CBX5P45973 191 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms