RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 THAP6Q8TBB0 222 aa9.13□□□□□ -0.95
USP3-218ENST00000560202 IL22RA2Q969J5 263 aa9.13□□□□□ -0.95
USP3-218ENST00000560202 TMEM186Q96B77 213 aa9.13□□□□□ -0.95
USP3-218ENST00000560202 WDR89Q96FK6 387 aaPredicted RBP9.13□□□□□ -0.95
USP3-218ENST00000560202 COMMD9Q9P000 198 aa9.13□□□□□ -0.95
USP3-218ENST00000560202 INSIG2Q9Y5U4 225 aa9.13□□□□□ -0.95
USP3-218ENST00000560202 YLPM1P49750 1951 aaKnown RBP9.13□□□□□ -0.95
USP3-218ENST00000560202 RNF222A6NCQ9 220 aa9.13□□□□□ -0.95
USP3-218ENST00000560202 C5orf51A6NDU8 294 aa9.13□□□□□ -0.95
USP3-218ENST00000560202 FGF16O43320 207 aa9.13□□□□□ -0.95
USP3-218ENST00000560202 RAMP3O60896 148 aa9.13□□□□□ -0.95
USP3-218ENST00000560202 IFNA21P01568 189 aa9.13□□□□□ -0.95
USP3-218ENST00000560202 MMP9P14780 707 aa9.13□□□□□ -0.95
USP3-218ENST00000560202 IL3RAP26951 378 aa9.13□□□□□ -0.95
USP3-218ENST00000560202 THBS3P49746 956 aa9.13□□□□□ -0.95
USP3-218ENST00000560202 ZNF137PP52743 207 aa9.13□□□□□ -0.95
USP3-218ENST00000560202 BRWD1-AS2P59051 145 aa9.13□□□□□ -0.95
USP3-218ENST00000560202 HLA-DRB5Q30154 266 aa9.13□□□□□ -0.95
USP3-218ENST00000560202 OR2B11Q5JQS5 317 aa9.13□□□□□ -0.95
USP3-218ENST00000560202 GGNBP1Q5YKI7 109 aa9.13□□□□□ -0.95
USP3-218ENST00000560202 ACOT7LQ6ZUV0 252 aa9.13□□□□□ -0.95
USP3-218ENST00000560202 PUSL1Q8N0Z8 303 aaKnown RBP9.13□□□□□ -0.95
USP3-218ENST00000560202 OR11H6Q8NGC7 330 aa9.13□□□□□ -0.95
USP3-218ENST00000560202 STOML3Q8TAV4 291 aa9.13□□□□□ -0.95
USP3-218ENST00000560202 ST6GALNAC6Q969X2 333 aa9.13□□□□□ -0.95
USP3-218ENST00000560202 SEC22AQ96IW7 307 aa9.13□□□□□ -0.95
USP3-218ENST00000560202 ADTRPQ96IZ2 230 aa9.13□□□□□ -0.95
USP3-218ENST00000560202 FAM212BQ9NTI7 297 aaPredicted RBP9.13□□□□□ -0.95
USP3-218ENST00000560202 TNFSF18Q9UNG2 199 aa9.13□□□□□ -0.95
USP3-218ENST00000560202 NAV2Q8IVL1 2488 aa9.12□□□□□ -0.95
USP3-218ENST00000560202 PIGBOS1A0A0B4J2F0 54 aa9.12□□□□□ -0.95
USP3-218ENST00000560202 DUXBA0A1W2PPF3 345 aa9.12□□□□□ -0.95
USP3-218ENST00000560202 B4DSR2 109 aa9.12□□□□□ -0.95
USP3-218ENST00000560202 BUB1B-PAK6H3BSN5 160 aa9.12□□□□□ -0.95
USP3-218ENST00000560202 FCGR3BO75015 233 aa9.12□□□□□ -0.95
USP3-218ENST00000560202 TOX4O94842 621 aa9.12□□□□□ -0.95
USP3-218ENST00000560202 IGKV1-39P01597 117 aa9.12□□□□□ -0.95
USP3-218ENST00000560202 IGKV1D-39P04432 117 aa9.12□□□□□ -0.95
USP3-218ENST00000560202 MSMBP08118 114 aa9.12□□□□□ -0.95
USP3-218ENST00000560202 CT45A6P0DMU7 189 aa9.12□□□□□ -0.95
USP3-218ENST00000560202 CT45A5P0DMU8 189 aa9.12□□□□□ -0.95
USP3-218ENST00000560202 CT45A7P0DMV0 189 aa9.12□□□□□ -0.95
USP3-218ENST00000560202 LPAR6P43657 344 aa9.12□□□□□ -0.95
USP3-218ENST00000560202 LOXL1Q08397 574 aaPredicted RBP9.12□□□□□ -0.95
USP3-218ENST00000560202 KLRD1Q13241 179 aa9.12□□□□□ -0.95
USP3-218ENST00000560202 HCP5Q6MZN7 132 aa9.12□□□□□ -0.95
USP3-218ENST00000560202 FAM71F2Q6NXP2 309 aa9.12□□□□□ -0.95
USP3-218ENST00000560202 KRTAP1-3Q8IUG1 177 aa9.12□□□□□ -0.95
USP3-218ENST00000560202 ZNF383Q8NA42 475 aa9.12□□□□□ -0.95
USP3-218ENST00000560202 OR4P4Q8NGL7 312 aa9.12□□□□□ -0.95
USP3-218ENST00000560202 CD300LFQ8TDQ1 290 aa9.12□□□□□ -0.95
USP3-218ENST00000560202 DDB2Q92466 427 aa9.12□□□□□ -0.95
USP3-218ENST00000560202 C1orf159Q96HA4 380 aa9.12□□□□□ -0.95
USP3-218ENST00000560202 OR10C1Q96KK4 312 aa9.12□□□□□ -0.95
USP3-218ENST00000560202 PCGF1Q9BSM1 259 aa9.12□□□□□ -0.95
USP3-218ENST00000560202 TMED3Q9Y3Q3 217 aa9.12□□□□□ -0.95
USP3-218ENST00000560202 ANKRD17O75179 2603 aaKnown RBP9.12□□□□□ -0.95
USP3-218ENST00000560202 DOCK11Q5JSL3 2073 aa9.12□□□□□ -0.95
USP3-218ENST00000560202 RNF223E7ERA6 249 aa9.11□□□□□ -0.95
USP3-218ENST00000560202 RNASEK-C17orf49H0YIS7 233 aa9.11□□□□□ -0.95
USP3-218ENST00000560202 UBE2CO00762 179 aa9.11□□□□□ -0.95
USP3-218ENST00000560202 ARG1P05089 322 aa9.11□□□□□ -0.95
USP3-218ENST00000560202 VDAC1P21796 283 aa9.11□□□□□ -0.95
USP3-218ENST00000560202 KIR2DS2P43631 304 aa9.11□□□□□ -0.95
USP3-218ENST00000560202 REG1BP48304 166 aa9.11□□□□□ -0.95
USP3-218ENST00000560202 PAX8Q06710 450 aa9.11□□□□□ -0.95
USP3-218ENST00000560202 ZNF816Q0VGE8 651 aaPredicted RBP9.11□□□□□ -0.95
USP3-218ENST00000560202 DIAPH2-AS1Q14236 149 aa9.11□□□□□ -0.95
USP3-218ENST00000560202 C15orf54Q8N8G6 183 aa9.11□□□□□ -0.95
USP3-218ENST00000560202 Q96MF0 132 aa9.11□□□□□ -0.95
USP3-218ENST00000560202 TBX15Q96SF7 602 aa9.11□□□□□ -0.95
USP3-218ENST00000560202 MRPL20Q9BYC9 149 aaKnown RBP9.11□□□□□ -0.95
USP3-218ENST00000560202 AMMECR1Q9Y4X0 333 aaPredicted RBP9.11□□□□□ -0.95
USP3-218ENST00000560202 POMT1Q9Y6A1 747 aa9.11□□□□□ -0.95
USP3-218ENST00000560202 ODF3BA8MYP8 253 aa9.1□□□□□ -0.95
USP3-218ENST00000560202 C1orf196B1AJZ1 125 aa9.1□□□□□ -0.95
USP3-218ENST00000560202 RBFOX2O43251 390 aaKnown RBP eCLIP9.1□□□□□ -0.95
USP3-218ENST00000560202 EIF3GO75821 320 aaKnown RBP eCLIP9.1□□□□□ -0.95
USP3-218ENST00000560202 S1PR2O95136 353 aa9.1□□□□□ -0.95
USP3-218ENST00000560202 HOXB4P17483 251 aaPredicted RBP9.1□□□□□ -0.95
USP3-218ENST00000560202 IAH1Q2TAA2 248 aaPredicted RBP9.1□□□□□ -0.95
USP3-218ENST00000560202 C11orf87Q6NUJ2 197 aa9.1□□□□□ -0.95
USP3-218ENST00000560202 TGIF2LXQ8IUE1 241 aa9.1□□□□□ -0.95
USP3-218ENST00000560202 RNF141Q8WVD5 230 aa9.1□□□□□ -0.95
USP3-218ENST00000560202 C2orf50Q96LR7 162 aa9.1□□□□□ -0.95
USP3-218ENST00000560202 NABP2Q9BQ15 211 aa9.1□□□□□ -0.95
USP3-218ENST00000560202 GSN-AS1Q9NRJ2 163 aa9.1□□□□□ -0.95
USP3-218ENST00000560202 METTL1Q9UBP6 276 aaKnown RBP9.1□□□□□ -0.95
USP3-218ENST00000560202 FASNP49327 2511 aaKnown RBP9.1□□□□□ -0.95
USP3-218ENST00000560202 ARHGAP32A7KAX9 2087 aa9.1□□□□□ -0.95
USP3-218ENST00000560202 TRAV14DV4A0A0A6YYC5 116 aa9.1□□□□□ -0.95
USP3-218ENST00000560202 LINC00587B1AMM8 73 aa9.1□□□□□ -0.95
USP3-218ENST00000560202 LY6LH3BQJ8 138 aa9.1□□□□□ -0.95
USP3-218ENST00000560202 HPRT1P00492 218 aa9.1□□□□□ -0.95
USP3-218ENST00000560202 SPP1P10451 314 aa9.1□□□□□ -0.95
USP3-218ENST00000560202 HTR1DP28221 377 aa9.1□□□□□ -0.95
USP3-218ENST00000560202 EIF5AP63241 154 aaKnown RBP9.1□□□□□ -0.95
USP3-218ENST00000560202 BLOC1S1P78537 153 aa9.1□□□□□ -0.95
USP3-218ENST00000560202 CYCSP99999 105 aaKnown RBP9.1□□□□□ -0.95
USP3-218ENST00000560202 SMCO1Q147U7 214 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms