RNA–Protein interactions for RNA: ENST00000559873.5

USP3-216, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-216ENST00000559873 PSG5Q15238 335 aa8.01□□□□□ -1.13
USP3-216ENST00000559873 FBLN7Q53RD9 439 aa8.01□□□□□ -1.13
USP3-216ENST00000559873 C12orf54Q6X4T0 127 aa8.01□□□□□ -1.13
USP3-216ENST00000559873 SGPP2Q8IWX5 399 aa8.01□□□□□ -1.13
USP3-216ENST00000559873 TEX45Q8NA69 505 aa8.01□□□□□ -1.13
USP3-216ENST00000559873 GON7Q9BXV9 100 aa8.01□□□□□ -1.13
USP3-216ENST00000559873 FBXL15Q9H469 300 aa8.01□□□□□ -1.13
USP3-216ENST00000559873 C5orf66Q9H5L9 145 aa8.01□□□□□ -1.13
USP3-216ENST00000559873 PLEKHA2Q9HB19 425 aa8.01□□□□□ -1.13
USP3-216ENST00000559873 PLSCR3Q9NRY6 295 aa8.01□□□□□ -1.13
USP3-216ENST00000559873 GPR132Q9UNW8 380 aa8.01□□□□□ -1.13
USP3-216ENST00000559873 RNF114Q9Y508 228 aa8.01□□□□□ -1.13
USP3-216ENST00000559873 C3orf85A0A1B0GTC6 90 aa8□□□□□ -1.13
USP3-216ENST00000559873 AP4M1O00189 453 aa8□□□□□ -1.13
USP3-216ENST00000559873 NDUFB6O95139 128 aa8□□□□□ -1.13
USP3-216ENST00000559873 IGHG2P01859 326 aa8□□□□□ -1.13
USP3-216ENST00000559873 AMY1AP04745 511 aa8□□□□□ -1.13
USP3-216ENST00000559873 CNTFRP26992 372 aa8□□□□□ -1.13
USP3-216ENST00000559873 SRPXP78539 464 aa8□□□□□ -1.13
USP3-216ENST00000559873 TRIM16LQ309B1 348 aa8□□□□□ -1.13
USP3-216ENST00000559873 AWAT1Q58HT5 328 aa8□□□□□ -1.13
USP3-216ENST00000559873 TMED4Q7Z7H5 227 aa8□□□□□ -1.13
USP3-216ENST00000559873 PPP1R27Q86WC6 154 aa8□□□□□ -1.13
USP3-216ENST00000559873 MMD2Q8IY49 270 aa8□□□□□ -1.13
USP3-216ENST00000559873 DMBX1Q8NFW5 382 aa8□□□□□ -1.13
USP3-216ENST00000559873 OR4A5Q8NH83 315 aa8□□□□□ -1.13
USP3-216ENST00000559873 LINC01006Q8NI28 216 aa8□□□□□ -1.13
USP3-216ENST00000559873 MRGPRFQ96AM1 343 aa8□□□□□ -1.13
USP3-216ENST00000559873 RITA1Q96K30 269 aa8□□□□□ -1.13
USP3-216ENST00000559873 RHOVQ96L33 236 aa8□□□□□ -1.13
USP3-216ENST00000559873 GPHA2Q96T91 129 aa8□□□□□ -1.13
USP3-216ENST00000559873 TSC22D3Q99576 134 aa8□□□□□ -1.13
USP3-216ENST00000559873 NAA60Q9H7X0 242 aa8□□□□□ -1.13
USP3-216ENST00000559873 ZNF580Q9UK33 172 aa8□□□□□ -1.13
USP3-216ENST00000559873 KCNIP3Q9Y2W7 256 aa8□□□□□ -1.13
USP3-216ENST00000559873 CRYM-AS1A6NIL9 109 aa7.99□□□□□ -1.13
USP3-216ENST00000559873 MARCH11A6NNE9 402 aa7.99□□□□□ -1.13
USP3-216ENST00000559873 RAMP3O60896 148 aa7.99□□□□□ -1.13
USP3-216ENST00000559873 KBTBD11O94819 623 aa7.99□□□□□ -1.13
USP3-216ENST00000559873 OR2A4O95047 310 aa7.99□□□□□ -1.13
USP3-216ENST00000559873 S1PR2O95136 353 aa7.99□□□□□ -1.13
USP3-216ENST00000559873 CNIH1O95406 144 aa7.99□□□□□ -1.13
USP3-216ENST00000559873 CA2P00918 260 aa7.99□□□□□ -1.13
USP3-216ENST00000559873 IGLV2-23P01705 113 aa7.99□□□□□ -1.13
USP3-216ENST00000559873 SAA1P0DJI8 122 aaPredicted RBP7.99□□□□□ -1.13
USP3-216ENST00000559873 MDKP21741 143 aaPredicted RBP7.99□□□□□ -1.13
USP3-216ENST00000559873 VDAC1P21796 283 aa7.99□□□□□ -1.13
USP3-216ENST00000559873 LPAR6P43657 344 aa7.99□□□□□ -1.13
USP3-216ENST00000559873 UBE2MP61081 183 aaKnown RBP7.99□□□□□ -1.13
USP3-216ENST00000559873 SLC35B1P78383 322 aa7.99□□□□□ -1.13
USP3-216ENST00000559873 DHODHQ02127 395 aa7.99□□□□□ -1.13
USP3-216ENST00000559873 ASAH1Q13510 395 aa7.99□□□□□ -1.13
USP3-216ENST00000559873 POU2AF1Q16633 256 aa7.99□□□□□ -1.13
USP3-216ENST00000559873 CENPSQ8N2Z9 138 aa7.99□□□□□ -1.13
USP3-216ENST00000559873 RNASE11Q8TAA1 199 aaKnown RBP7.99□□□□□ -1.13
USP3-216ENST00000559873 ENKURQ8TC29 256 aa7.99□□□□□ -1.13
USP3-216ENST00000559873 ABHD5Q8WTS1 349 aa7.99□□□□□ -1.13
USP3-216ENST00000559873 CHPT1Q8WUD6 406 aa7.99□□□□□ -1.13
USP3-216ENST00000559873 R3HDM4Q96D70 268 aa7.99□□□□□ -1.13
USP3-216ENST00000559873 OR2A7Q96R45 310 aa7.99□□□□□ -1.13
USP3-216ENST00000559873 RTBDNQ9BSG5 229 aaPredicted RBP7.99□□□□□ -1.13
USP3-216ENST00000559873 OR51J1Q9H342 316 aa7.99□□□□□ -1.13
USP3-216ENST00000559873 PARP11Q9NR21 331 aa7.99□□□□□ -1.13
USP3-216ENST00000559873 BET1LQ9NYM9 111 aa7.99□□□□□ -1.13
USP3-216ENST00000559873 VSIG4Q9Y279 399 aa7.99□□□□□ -1.13
USP3-216ENST00000559873 SIGLEC9Q9Y336 463 aa7.99□□□□□ -1.13
USP3-216ENST00000559873 STAB1Q9NY15 2570 aa7.98□□□□□ -1.13
USP3-216ENST00000559873 FAM240BA0A1B0GVZ2 78 aa7.98□□□□□ -1.13
USP3-216ENST00000559873 SH2D7A6NKC9 451 aaPredicted RBP7.98□□□□□ -1.13
USP3-216ENST00000559873 HAX1O00165 279 aa7.98□□□□□ -1.13
USP3-216ENST00000559873 FGF2P09038 288 aa7.98□□□□□ -1.13
USP3-216ENST00000559873 VSIG10L2P0DP72 767 aa7.98□□□□□ -1.13
USP3-216ENST00000559873 AKR1C4P17516 323 aa7.98□□□□□ -1.13
USP3-216ENST00000559873 UCP1P25874 307 aa7.98□□□□□ -1.13
USP3-216ENST00000559873 MAS1LP35410 378 aa7.98□□□□□ -1.13
USP3-216ENST00000559873 CCR6P51684 374 aa7.98□□□□□ -1.13
USP3-216ENST00000559873 AKR1C2P52895 323 aa7.98□□□□□ -1.13
USP3-216ENST00000559873 GNB1P62873 340 aa7.98□□□□□ -1.13
USP3-216ENST00000559873 TMEM267Q0VDI3 215 aaPredicted RBP7.98□□□□□ -1.13
USP3-216ENST00000559873 TMEM128Q5BJH2 165 aa7.98□□□□□ -1.13
USP3-216ENST00000559873 ZNF562Q6V9R5 426 aa7.98□□□□□ -1.13
USP3-216ENST00000559873 SSX9Q7RTT3 188 aa7.98□□□□□ -1.13
USP3-216ENST00000559873 COMMD1Q8N668 190 aa7.98□□□□□ -1.13
USP3-216ENST00000559873 KLHDC1Q8N7A1 406 aa7.98□□□□□ -1.13
USP3-216ENST00000559873 C3orf56Q8N813 242 aa7.98□□□□□ -1.13
USP3-216ENST00000559873 OR4X2Q8NGF9 303 aa7.98□□□□□ -1.13
USP3-216ENST00000559873 TMEM167AQ8TBQ9 72 aa7.98□□□□□ -1.13
USP3-216ENST00000559873 ARPC1AQ92747 370 aa7.98□□□□□ -1.13
USP3-216ENST00000559873 GALNT14Q96FL9 552 aa7.98□□□□□ -1.13
USP3-216ENST00000559873 TMEM222Q9H0R3 208 aa7.98□□□□□ -1.13
USP3-216ENST00000559873 PALMDQ9NP74 551 aa7.98□□□□□ -1.13
USP3-216ENST00000559873 TMEM140Q9NV12 185 aa7.98□□□□□ -1.13
USP3-216ENST00000559873 IGHV7-81A0A0B4J1V7 117 aa7.97□□□□□ -1.13
USP3-216ENST00000559873 PSMB11A5LHX3 300 aa7.97□□□□□ -1.13
USP3-216ENST00000559873 SRRM4A7MD48 611 aaKnown RBP7.97□□□□□ -1.13
USP3-216ENST00000559873 PLA2G10O15496 165 aa7.97□□□□□ -1.13
USP3-216ENST00000559873 SNAPC5O75971 98 aa7.97□□□□□ -1.13
USP3-216ENST00000559873 IGF1P05019 195 aa7.97□□□□□ -1.13
USP3-216ENST00000559873 OR5AC1P0C628 307 aa7.97□□□□□ -1.13
USP3-216ENST00000559873 VAMP1P23763 118 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms