RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 LRRC10Q5BKY1 277 aa14.6□□□□□ -0.07
SNX1-208ENST00000559844 OR4S2Q8NH73 311 aa14.6□□□□□ -0.07
SNX1-208ENST00000559844 SCGB1C1Q8TD33 95 aa14.6□□□□□ -0.07
SNX1-208ENST00000559844 PARD6GQ9BYG4 376 aaPredicted RBP14.6□□□□□ -0.07
SNX1-208ENST00000559844 UQCC1Q9NVA1 299 aa14.6□□□□□ -0.07
SNX1-208ENST00000559844 IGHV1-69-2A0A0G2JMI3 117 aa14.59□□□□□ -0.07
SNX1-208ENST00000559844 RNASEK-C17orf49H0YIS7 233 aa14.59□□□□□ -0.07
SNX1-208ENST00000559844 NDUFA2O43678 99 aa14.59□□□□□ -0.07
SNX1-208ENST00000559844 RBMXL2O75526 392 aaKnown RBP14.59□□□□□ -0.07
SNX1-208ENST00000559844 SCAF4O95104 1147 aaKnown RBP14.59□□□□□ -0.07
SNX1-208ENST00000559844 IGHV3-7P01780 117 aa14.59□□□□□ -0.07
SNX1-208ENST00000559844 DAOP14920 347 aa14.59□□□□□ -0.07
SNX1-208ENST00000559844 EFNA4P52798 201 aa14.59□□□□□ -0.07
SNX1-208ENST00000559844 DVL1P1P54792 670 aaPredicted RBP14.59□□□□□ -0.07
SNX1-208ENST00000559844 LINC00205P59089 165 aa14.59□□□□□ -0.07
SNX1-208ENST00000559844 RPL31P62899 125 aaKnown RBP14.59□□□□□ -0.07
SNX1-208ENST00000559844 MRPS11P82912 194 aaKnown RBP14.59□□□□□ -0.07
SNX1-208ENST00000559844 DEFA5Q01523 94 aa14.59□□□□□ -0.07
SNX1-208ENST00000559844 AKR1C1Q04828 323 aa14.59□□□□□ -0.07
SNX1-208ENST00000559844 TMEM14EPQ6UXP3 125 aa14.59□□□□□ -0.07
SNX1-208ENST00000559844 DPPA3Q6W0C5 159 aa14.59□□□□□ -0.07
SNX1-208ENST00000559844 LILRB2Q8N423 598 aa14.59□□□□□ -0.07
SNX1-208ENST00000559844 LFNGQ8NES3 379 aa14.59□□□□□ -0.07
SNX1-208ENST00000559844 FAM213BQ8TBF2 198 aa14.59□□□□□ -0.07
SNX1-208ENST00000559844 DDB2Q92466 427 aa14.59□□□□□ -0.07
SNX1-208ENST00000559844 PERPQ96FX8 193 aa14.59□□□□□ -0.07
SNX1-208ENST00000559844 KAAG1Q9UBP8 84 aa14.59□□□□□ -0.07
SNX1-208ENST00000559844 SAA2-SAA4A0A096LPE2 208 aa14.58□□□□□ -0.07
SNX1-208ENST00000559844 F12P00748 615 aaPredicted RBP14.58□□□□□ -0.07
SNX1-208ENST00000559844 IGHV4-39P01824 125 aa14.58□□□□□ -0.07
SNX1-208ENST00000559844 OR8U8P0C7N1 319 aa14.58□□□□□ -0.07
SNX1-208ENST00000559844 SAA2P0DJI9 122 aaPredicted RBP14.58□□□□□ -0.07
SNX1-208ENST00000559844 NQO2P16083 231 aa14.58□□□□□ -0.07
SNX1-208ENST00000559844 ATP5J2P56134 94 aa14.58□□□□□ -0.07
SNX1-208ENST00000559844 SRSF3P84103 164 aaKnown RBP14.58□□□□□ -0.07
SNX1-208ENST00000559844 PRAMEF5Q5TYX0 476 aa14.58□□□□□ -0.07
SNX1-208ENST00000559844 LYG1Q8N1E2 194 aa14.58□□□□□ -0.07
SNX1-208ENST00000559844 ZNF525Q8N782 197 aa14.58□□□□□ -0.07
SNX1-208ENST00000559844 DTD1Q8TEA8 209 aa14.58□□□□□ -0.07
SNX1-208ENST00000559844 LEAP2Q969E1 77 aa14.58□□□□□ -0.07
SNX1-208ENST00000559844 CD5P06127 495 aa14.58□□□□□ -0.08
SNX1-208ENST00000559844 SNCAP37840 140 aa14.58□□□□□ -0.08
SNX1-208ENST00000559844 AARDQ4LEZ3 155 aa14.58□□□□□ -0.08
SNX1-208ENST00000559844 C10orf91Q5T1B1 145 aa14.58□□□□□ -0.08
SNX1-208ENST00000559844 AKR1C8PQ5T2L2 129 aa14.58□□□□□ -0.08
SNX1-208ENST00000559844 SLC25A48Q6ZT89 311 aaKnown RBP14.58□□□□□ -0.08
SNX1-208ENST00000559844 RAB39BQ96DA2 213 aa14.58□□□□□ -0.08
SNX1-208ENST00000559844 ZNF714Q96N38 554 aa14.58□□□□□ -0.08
SNX1-208ENST00000559844 SEC11CQ9BY50 192 aa14.58□□□□□ -0.08
SNX1-208ENST00000559844 CARHSP1Q9Y2V2 147 aaKnown RBP14.58□□□□□ -0.08
SNX1-208ENST00000559844 F8W036 122 aa14.57□□□□□ -0.08
SNX1-208ENST00000559844 ATP6V1FQ16864 119 aa14.57□□□□□ -0.08
SNX1-208ENST00000559844 HFEQ30201 348 aa14.57□□□□□ -0.08
SNX1-208ENST00000559844 DEFB113Q30KQ7 82 aa14.57□□□□□ -0.08
SNX1-208ENST00000559844 HAPLN4Q86UW8 402 aa14.57□□□□□ -0.08
SNX1-208ENST00000559844 SVBPQ8N300 66 aa14.57□□□□□ -0.08
SNX1-208ENST00000559844 TMEM231Q9H6L2 316 aa14.57□□□□□ -0.08
SNX1-208ENST00000559844 BEX4Q9NWD9 120 aaPredicted RBP14.57□□□□□ -0.08
SNX1-208ENST00000559844 A0A1W2PPE3 182 aa14.56□□□□□ -0.08
SNX1-208ENST00000559844 CEBPZOSA8MTT3 80 aa14.56□□□□□ -0.08
SNX1-208ENST00000559844 LYNX1G3V0Z9 82 aa14.56□□□□□ -0.08
SNX1-208ENST00000559844 AGPAT2O15120 278 aa14.56□□□□□ -0.08
SNX1-208ENST00000559844 LYNX1P0DP58 116 aa14.56□□□□□ -0.08
SNX1-208ENST00000559844 PAX1P15863 534 aa14.56□□□□□ -0.08
SNX1-208ENST00000559844 FHITP49789 147 aa14.56□□□□□ -0.08
SNX1-208ENST00000559844 GNG10P50151 68 aa14.56□□□□□ -0.08
SNX1-208ENST00000559844 SLC38A11Q08AI6 406 aa14.56□□□□□ -0.08
SNX1-208ENST00000559844 ARL16Q0P5N6 197 aa14.56□□□□□ -0.08
SNX1-208ENST00000559844 PEA15Q15121 130 aa14.56□□□□□ -0.08
SNX1-208ENST00000559844 HEPN1Q6WQI6 88 aa14.56□□□□□ -0.08
SNX1-208ENST00000559844 OR52E5Q8NH55 327 aa14.56□□□□□ -0.08
SNX1-208ENST00000559844 OR4A16Q8NH70 328 aa14.56□□□□□ -0.08
SNX1-208ENST00000559844 ZNF251Q9BRH9 671 aa14.56□□□□□ -0.08
SNX1-208ENST00000559844 PSMG3Q9BT73 122 aaPredicted RBP14.56□□□□□ -0.08
SNX1-208ENST00000559844 FAM96BQ9Y3D0 163 aa14.56□□□□□ -0.08
SNX1-208ENST00000559844 PPIHO43447 177 aaKnown RBP14.56□□□□□ -0.08
SNX1-208ENST00000559844 OR9G9P0C7N8 305 aa14.56□□□□□ -0.08
SNX1-208ENST00000559844 COL8A2P25067 703 aa14.56□□□□□ -0.08
SNX1-208ENST00000559844 RUNX1Q01196 453 aa14.56□□□□□ -0.08
SNX1-208ENST00000559844 ZNF273Q14593 569 aa14.56□□□□□ -0.08
SNX1-208ENST00000559844 LRRC75BQ2VPJ9 315 aa14.56□□□□□ -0.08
SNX1-208ENST00000559844 THNSL2Q86YJ6 484 aa14.56□□□□□ -0.08
SNX1-208ENST00000559844 CLCC1Q96S66 551 aa14.56□□□□□ -0.08
SNX1-208ENST00000559844 PBDC1Q9BVG4 233 aa14.56□□□□□ -0.08
SNX1-208ENST00000559844 MS4A7Q9GZW8 240 aaPredicted RBP14.56□□□□□ -0.08
SNX1-208ENST00000559844 BTBD17A6NE02 478 aa14.55□□□□□ -0.08
SNX1-208ENST00000559844 MMP23AO75900 390 aa14.55□□□□□ -0.08
SNX1-208ENST00000559844 ADCYAP1P18509 176 aa14.55□□□□□ -0.08
SNX1-208ENST00000559844 UTF1Q5T230 341 aa14.55□□□□□ -0.08
SNX1-208ENST00000559844 H1FXQ92522 213 aaKnown RBP14.55□□□□□ -0.08
SNX1-208ENST00000559844 MBD6Q96DN6 1003 aa14.55□□□□□ -0.08
SNX1-208ENST00000559844 OR4C12Q96R67 309 aa14.55□□□□□ -0.08
SNX1-208ENST00000559844 QTRT1Q9BXR0 403 aaKnown RBP14.55□□□□□ -0.08
SNX1-208ENST00000559844 PDZD2O15018 2839 aa14.55□□□□□ -0.08
SNX1-208ENST00000559844 DSCAML1Q8TD84 2053 aa14.55□□□□□ -0.08
SNX1-208ENST00000559844 FSTL3O95633 263 aa14.54□□□□□ -0.08
SNX1-208ENST00000559844 SPCS3P61009 180 aa14.54□□□□□ -0.08
SNX1-208ENST00000559844 RPP30P78346 268 aaKnown RBP14.54□□□□□ -0.08
SNX1-208ENST00000559844 TMEM200BQ69YZ2 307 aa14.54□□□□□ -0.08
SNX1-208ENST00000559844 LYPD2Q6UXB3 125 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms