RNA–Protein interactions for RNA: ENST00000559566.5

SHF-205, Transcript of Src homology 2 domain containing F, humanhuman

TSL 1 (best)

Gene SHF, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-205ENST00000559566 RAB3DO95716 219 aa15.25■□□□□ 0.03
SHF-205ENST00000559566 IGHG4P01861 327 aa15.25■□□□□ 0.03
SHF-205ENST00000559566 RPLP1P05386 114 aaKnown RBP15.25■□□□□ 0.03
SHF-205ENST00000559566 TBPP20226 339 aa15.25■□□□□ 0.03
SHF-205ENST00000559566 GNB1P62873 340 aa15.25■□□□□ 0.03
SHF-205ENST00000559566 SLC35B1P78383 322 aa15.25■□□□□ 0.03
SHF-205ENST00000559566 SSBP1Q04837 148 aaKnown RBP15.25■□□□□ 0.03
SHF-205ENST00000559566 FXYD3Q14802 87 aa15.25■□□□□ 0.03
SHF-205ENST00000559566 KHDC1LQ5JSQ8 128 aa15.25■□□□□ 0.03
SHF-205ENST00000559566 TEX45Q8NA69 505 aa15.25■□□□□ 0.03
SHF-205ENST00000559566 OR6Q1Q8NGQ2 317 aa15.25■□□□□ 0.03
SHF-205ENST00000559566 KLK15Q9H2R5 256 aa15.25■□□□□ 0.03
SHF-205ENST00000559566 NDUFA13Q9P0J0 144 aa15.25■□□□□ 0.03
SHF-205ENST00000559566 RABL2AQ9UBK7 228 aaPredicted RBP15.25■□□□□ 0.03
SHF-205ENST00000559566 RABL2BQ9UNT1 228 aa15.25■□□□□ 0.03
SHF-205ENST00000559566 TSSC4Q9Y5U2 329 aaPredicted RBP15.25■□□□□ 0.03
SHF-205ENST00000559566 GPR31O00270 319 aa15.24■□□□□ 0.03
SHF-205ENST00000559566 PI3P19957 117 aa15.24■□□□□ 0.03
SHF-205ENST00000559566 UCP3P55916 312 aa15.24■□□□□ 0.03
SHF-205ENST00000559566 RPL23AP62750 156 aaKnown RBP15.24■□□□□ 0.03
SHF-205ENST00000559566 PRSS8Q16651 343 aa15.24■□□□□ 0.03
SHF-205ENST00000559566 VMA21Q3ZAQ7 101 aa15.24■□□□□ 0.03
SHF-205ENST00000559566 ASPHD1Q5U4P2 390 aa15.24■□□□□ 0.03
SHF-205ENST00000559566 ARRDC1Q8N5I2 433 aa15.24■□□□□ 0.03
SHF-205ENST00000559566 RNF152Q8N8N0 203 aa15.24■□□□□ 0.03
SHF-205ENST00000559566 MINDY2Q8NBR6 621 aa15.24■□□□□ 0.03
SHF-205ENST00000559566 OR4C16Q8NGL9 310 aa15.24■□□□□ 0.03
SHF-205ENST00000559566 GRPEL2Q8TAA5 225 aa15.24■□□□□ 0.03
SHF-205ENST00000559566 ABHD5Q8WTS1 349 aa15.24■□□□□ 0.03
SHF-205ENST00000559566 CASTOR1Q8WTX7 329 aa15.24■□□□□ 0.03
SHF-205ENST00000559566 ARPC1AQ92747 370 aa15.24■□□□□ 0.03
SHF-205ENST00000559566 TRIM63Q969Q1 353 aa15.24■□□□□ 0.03
SHF-205ENST00000559566 ANKRD20A5PA0PJZ0 165 aa15.23■□□□□ 0.03
SHF-205ENST00000559566 S1PR2O95136 353 aa15.23■□□□□ 0.03
SHF-205ENST00000559566 IGLV1-40P01703 118 aa15.23■□□□□ 0.03
SHF-205ENST00000559566 OPN1MWP04001 364 aa15.23■□□□□ 0.03
SHF-205ENST00000559566 IFNA6P05013 189 aa15.23■□□□□ 0.03
SHF-205ENST00000559566 OPN1MW2P0DN77 364 aa15.23■□□□□ 0.03
SHF-205ENST00000559566 OPN1MW3P0DN78 364 aa15.23■□□□□ 0.03
SHF-205ENST00000559566 PSMB8P28062 276 aa15.23■□□□□ 0.03
SHF-205ENST00000559566 KIR2DS2P43631 304 aa15.23■□□□□ 0.03
SHF-205ENST00000559566 PPP5CP53041 499 aa15.23■□□□□ 0.03
SHF-205ENST00000559566 CATR1Q13166 79 aa15.23■□□□□ 0.03
SHF-205ENST00000559566 FOXE3Q13461 319 aa15.23■□□□□ 0.03
SHF-205ENST00000559566 ZNF585BQ52M93 769 aa15.23■□□□□ 0.03
SHF-205ENST00000559566 C10orf55Q5SWW7 151 aa15.23■□□□□ 0.03
SHF-205ENST00000559566 TEX38Q6PEX7 206 aa15.23■□□□□ 0.03
SHF-205ENST00000559566 SSX9Q7RTT3 188 aa15.23■□□□□ 0.03
SHF-205ENST00000559566 PUSL1Q8N0Z8 303 aaKnown RBP15.23■□□□□ 0.03
SHF-205ENST00000559566 LFNGQ8NES3 379 aa15.23■□□□□ 0.03
SHF-205ENST00000559566 R3HDM4Q96D70 268 aa15.23■□□□□ 0.03
SHF-205ENST00000559566 ZNF430Q9H8G1 570 aaPredicted RBP15.23■□□□□ 0.03
SHF-205ENST00000559566 RBFOX2O43251 390 aaKnown RBP eCLIP15.22■□□□□ 0.03
SHF-205ENST00000559566 MYOD1P15172 320 aa15.22■□□□□ 0.03
SHF-205ENST00000559566 S100A5P33763 92 aa15.22■□□□□ 0.03
SHF-205ENST00000559566 KIAA0141Q14154 515 aaPredicted RBP15.22■□□□□ 0.03
SHF-205ENST00000559566 PYDC2Q56P42 97 aa15.22■□□□□ 0.03
SHF-205ENST00000559566 COMMD1Q8N668 190 aa15.22■□□□□ 0.03
SHF-205ENST00000559566 THAP7Q9BT49 309 aaPredicted RBP15.22■□□□□ 0.03
SHF-205ENST00000559566 PLXNB1O43157 2135 aa15.22■□□□□ 0.03
SHF-205ENST00000559566 A0A1W2PN81 502 aa15.21■□□□□ 0.03
SHF-205ENST00000559566 A6NHS1 94 aa15.21■□□□□ 0.03
SHF-205ENST00000559566 ELANEP08246 267 aa15.21■□□□□ 0.03
SHF-205ENST00000559566 AKAIN1P0CW23 69 aa15.21■□□□□ 0.03
SHF-205ENST00000559566 PGAM2P15259 253 aa15.21■□□□□ 0.03
SHF-205ENST00000559566 CHRNA7P36544 502 aa15.21■□□□□ 0.03
SHF-205ENST00000559566 ETV6P41212 452 aa15.21■□□□□ 0.03
SHF-205ENST00000559566 TNXAQ16473 311 aa15.21■□□□□ 0.03
SHF-205ENST00000559566 SCGB2B2Q4G0G5 96 aa15.21■□□□□ 0.03
SHF-205ENST00000559566 UNQ5815/PRO19632Q6UWF5 114 aa15.21■□□□□ 0.03
SHF-205ENST00000559566 ETV3LQ6ZN32 361 aa15.21■□□□□ 0.03
SHF-205ENST00000559566 TBC1D26Q86UD7 250 aa15.21■□□□□ 0.03
SHF-205ENST00000559566 SLC38A6Q8IZM9 456 aa15.21■□□□□ 0.03
SHF-205ENST00000559566 MYOZ3Q8TDC0 251 aa15.21■□□□□ 0.03
SHF-205ENST00000559566 RHOVQ96L33 236 aa15.21■□□□□ 0.03
SHF-205ENST00000559566 GON7Q9BXV9 100 aa15.21■□□□□ 0.03
SHF-205ENST00000559566 PKD1L1Q8TDX9 2849 aa15.21■□□□□ 0.03
SHF-205ENST00000559566 FBN3Q75N90 2809 aa15.2■□□□□ 0.02
SHF-205ENST00000559566 TRAV3A0A0B4J244 114 aa15.2■□□□□ 0.02
SHF-205ENST00000559566 KBTBD11O94819 623 aa15.2■□□□□ 0.02
SHF-205ENST00000559566 OR2A4O95047 310 aa15.2■□□□□ 0.02
SHF-205ENST00000559566 CNIH1O95406 144 aa15.2■□□□□ 0.02
SHF-205ENST00000559566 HPRT1P00492 218 aa15.2■□□□□ 0.02
SHF-205ENST00000559566 APELAP0DMC3 54 aa15.2■□□□□ 0.02
SHF-205ENST00000559566 RPA2P15927 270 aa15.2■□□□□ 0.02
SHF-205ENST00000559566 F2RP25116 425 aa15.2■□□□□ 0.02
SHF-205ENST00000559566 KLF9Q13886 244 aaPredicted RBP15.2■□□□□ 0.02
SHF-205ENST00000559566 CXorf66Q5JRM2 361 aaPredicted RBP15.2■□□□□ 0.02
SHF-205ENST00000559566 C8orf86Q6ZUL3 223 aa15.2■□□□□ 0.02
SHF-205ENST00000559566 CMTM1Q8IZ96 169 aa15.2■□□□□ 0.02
SHF-205ENST00000559566 OR13C8Q8NGS7 320 aa15.2■□□□□ 0.02
SHF-205ENST00000559566 TERB2Q8NHR7 220 aa15.2■□□□□ 0.02
SHF-205ENST00000559566 TMEM167AQ8TBQ9 72 aa15.2■□□□□ 0.02
SHF-205ENST00000559566 MARCH1Q8TCQ1 289 aa15.2■□□□□ 0.02
SHF-205ENST00000559566 BORCS5Q969J3 196 aa15.2■□□□□ 0.02
SHF-205ENST00000559566 OR2A7Q96R45 310 aa15.2■□□□□ 0.02
SHF-205ENST00000559566 SRRQ9GZT4 340 aa15.2■□□□□ 0.02
SHF-205ENST00000559566 SLC2A9Q9NRM0 540 aa15.2■□□□□ 0.02
SHF-205ENST00000559566 FOXA2Q9Y261 457 aaPredicted RBP15.2■□□□□ 0.02
SHF-205ENST00000559566 A0A1B0GW64 132 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms