RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 FBN1P35555 2871 aaKnown RBP17.15■□□□□ 0.34
SNX1-206ENST00000559389 PLA2G10O15496 165 aa17.15■□□□□ 0.34
SNX1-206ENST00000559389 UPK1BO75841 260 aa17.15■□□□□ 0.34
SNX1-206ENST00000559389 SAA1P0DJI8 122 aaPredicted RBP17.15■□□□□ 0.34
SNX1-206ENST00000559389 BTCP35070 178 aa17.15■□□□□ 0.34
SNX1-206ENST00000559389 VDAC2P45880 294 aaPredicted RBP17.15■□□□□ 0.34
SNX1-206ENST00000559389 PLGLAQ15195 96 aa17.15■□□□□ 0.34
SNX1-206ENST00000559389 VMA21Q3ZAQ7 101 aa17.15■□□□□ 0.34
SNX1-206ENST00000559389 LIN54Q6MZP7 749 aa17.15■□□□□ 0.34
SNX1-206ENST00000559389 SLC35E3Q7Z769 313 aa17.15■□□□□ 0.34
SNX1-206ENST00000559389 SCGB3A2Q96PL1 93 aa17.15■□□□□ 0.34
SNX1-206ENST00000559389 SLC25A21Q9BQT8 299 aaPredicted RBP17.15■□□□□ 0.34
SNX1-206ENST00000559389 PLEKHA2Q9HB19 425 aa17.15■□□□□ 0.34
SNX1-206ENST00000559389 COMMD9Q9P000 198 aa17.15■□□□□ 0.34
SNX1-206ENST00000559389 CENPXA8MT69 81 aa17.14■□□□□ 0.33
SNX1-206ENST00000559389 H0Y980 276 aa17.14■□□□□ 0.33
SNX1-206ENST00000559389 S1PR2O95136 353 aa17.14■□□□□ 0.33
SNX1-206ENST00000559389 HPRT1P00492 218 aa17.14■□□□□ 0.33
SNX1-206ENST00000559389 RBMS2Q15434 407 aaKnown RBP17.14■□□□□ 0.33
SNX1-206ENST00000559389 ZNF585BQ52M93 769 aa17.14■□□□□ 0.33
SNX1-206ENST00000559389 IGHV7-81A0A0B4J1V7 117 aa17.13■□□□□ 0.33
SNX1-206ENST00000559389 KCNAB3O43448 404 aa17.13■□□□□ 0.33
SNX1-206ENST00000559389 HRASP01112 189 aa17.13■□□□□ 0.33
SNX1-206ENST00000559389 CCR6P51684 374 aa17.13■□□□□ 0.33
SNX1-206ENST00000559389 TAS2R31P59538 309 aa17.13■□□□□ 0.33
SNX1-206ENST00000559389 POU2AF1Q16633 256 aa17.13■□□□□ 0.33
SNX1-206ENST00000559389 PPP1R27Q86WC6 154 aa17.13■□□□□ 0.33
SNX1-206ENST00000559389 TEX45Q8NA69 505 aa17.13■□□□□ 0.33
SNX1-206ENST00000559389 WFDC12Q8WWY7 111 aa17.13■□□□□ 0.33
SNX1-206ENST00000559389 TMEM230Q96A57 120 aa17.13■□□□□ 0.33
SNX1-206ENST00000559389 RHOVQ96L33 236 aa17.13■□□□□ 0.33
SNX1-206ENST00000559389 WNT10AQ9GZT5 417 aa17.13■□□□□ 0.33
SNX1-206ENST00000559389 LYRM1O43325 122 aa17.12■□□□□ 0.33
SNX1-206ENST00000559389 CA2P00918 260 aa17.12■□□□□ 0.33
SNX1-206ENST00000559389 NDPQ00604 133 aa17.12■□□□□ 0.33
SNX1-206ENST00000559389 MRGPRG-AS1Q2M3A8 158 aa17.12■□□□□ 0.33
SNX1-206ENST00000559389 VKORC1L1Q8N0U8 176 aa17.12■□□□□ 0.33
SNX1-206ENST00000559389 PUSL1Q8N0Z8 303 aaKnown RBP17.12■□□□□ 0.33
SNX1-206ENST00000559389 TP53RKQ96S44 253 aa17.12■□□□□ 0.33
SNX1-206ENST00000559389 NAA60Q9H7X0 242 aa17.12■□□□□ 0.33
SNX1-206ENST00000559389 ZNF580Q9UK33 172 aa17.12■□□□□ 0.33
SNX1-206ENST00000559389 TBC1D24Q9ULP9 559 aa17.12■□□□□ 0.33
SNX1-206ENST00000559389 C3orf85A0A1B0GTC6 90 aa17.11■□□□□ 0.33
SNX1-206ENST00000559389 CRYM-AS1A6NIL9 109 aa17.11■□□□□ 0.33
SNX1-206ENST00000559389 LINC01548A6NM66 108 aa17.11■□□□□ 0.33
SNX1-206ENST00000559389 FCN1O00602 326 aa17.11■□□□□ 0.33
SNX1-206ENST00000559389 NDUFB6O95139 128 aa17.11■□□□□ 0.33
SNX1-206ENST00000559389 NQO2P16083 231 aa17.11■□□□□ 0.33
SNX1-206ENST00000559389 LPAR6P43657 344 aa17.11■□□□□ 0.33
SNX1-206ENST00000559389 CX3CL1P78423 397 aa17.11■□□□□ 0.33
SNX1-206ENST00000559389 C12orf54Q6X4T0 127 aa17.11■□□□□ 0.33
SNX1-206ENST00000559389 FOXRED2Q8IWF2 684 aa17.11■□□□□ 0.33
SNX1-206ENST00000559389 KLHDC1Q8N7A1 406 aa17.11■□□□□ 0.33
SNX1-206ENST00000559389 ADAD2Q8NCV1 583 aaKnown RBP17.11■□□□□ 0.33
SNX1-206ENST00000559389 VSTM2AQ8TAG5 236 aa17.11■□□□□ 0.33
SNX1-206ENST00000559389 AIFM2Q9BRQ8 373 aa17.11■□□□□ 0.33
SNX1-206ENST00000559389 AP4M1O00189 453 aa17.1■□□□□ 0.33
SNX1-206ENST00000559389 ATP6V0E1O15342 81 aa17.1■□□□□ 0.33
SNX1-206ENST00000559389 B3GALNT1O75752 331 aa17.1■□□□□ 0.33
SNX1-206ENST00000559389 KBTBD11O94819 623 aa17.1■□□□□ 0.33
SNX1-206ENST00000559389 SSBP2P81877 361 aaPredicted RBP17.1■□□□□ 0.33
SNX1-206ENST00000559389 IFITM3Q01628 133 aa17.1■□□□□ 0.33
SNX1-206ENST00000559389 ASAH1Q13510 395 aa17.1■□□□□ 0.33
SNX1-206ENST00000559389 WIPF2Q8TF74 440 aaPredicted RBP17.1■□□□□ 0.33
SNX1-206ENST00000559389 R3HDM4Q96D70 268 aa17.1■□□□□ 0.33
SNX1-206ENST00000559389 CLCC1Q96S66 551 aa17.1■□□□□ 0.33
SNX1-206ENST00000559389 OR51J1Q9H342 316 aa17.1■□□□□ 0.33
SNX1-206ENST00000559389 TEX13DA0A0J9YY54 714 aaPredicted RBP17.09■□□□□ 0.33
SNX1-206ENST00000559389 MARCH11A6NNE9 402 aa17.09■□□□□ 0.33
SNX1-206ENST00000559389 CREBL2O60519 120 aaPredicted RBP17.09■□□□□ 0.33
SNX1-206ENST00000559389 OR2A4O95047 310 aa17.09■□□□□ 0.33
SNX1-206ENST00000559389 IGF1P05019 195 aa17.09■□□□□ 0.33
SNX1-206ENST00000559389 OR5AC1P0C628 307 aa17.09■□□□□ 0.33
SNX1-206ENST00000559389 UCP1P25874 307 aa17.09■□□□□ 0.33
SNX1-206ENST00000559389 ERVK-16P61578 105 aa17.09■□□□□ 0.33
SNX1-206ENST00000559389 PJVKQ0ZLH3 352 aa17.09■□□□□ 0.33
SNX1-206ENST00000559389 PRSS8Q16651 343 aa17.09■□□□□ 0.33
SNX1-206ENST00000559389 OR4A47Q6IF82 309 aa17.09■□□□□ 0.33
SNX1-206ENST00000559389 ZNF562Q6V9R5 426 aa17.09■□□□□ 0.33
SNX1-206ENST00000559389 SSX9Q7RTT3 188 aa17.09■□□□□ 0.33
SNX1-206ENST00000559389 TMED4Q7Z7H5 227 aa17.09■□□□□ 0.33
SNX1-206ENST00000559389 TMEM167AQ8TBQ9 72 aa17.09■□□□□ 0.33
SNX1-206ENST00000559389 NOL4LQ96MY1 436 aaPredicted RBP17.09■□□□□ 0.33
SNX1-206ENST00000559389 OR2A7Q96R45 310 aa17.09■□□□□ 0.33
SNX1-206ENST00000559389 PARP11Q9NR21 331 aa17.09■□□□□ 0.33
SNX1-206ENST00000559389 BET1LQ9NYM9 111 aa17.09■□□□□ 0.33
SNX1-206ENST00000559389 HAX1O00165 279 aa17.08■□□□□ 0.32
SNX1-206ENST00000559389 ARPC1BO15143 372 aaKnown RBP17.08■□□□□ 0.32
SNX1-206ENST00000559389 IGKV1-39P01597 117 aa17.08■□□□□ 0.32
SNX1-206ENST00000559389 IGKV1D-39P04432 117 aa17.08■□□□□ 0.32
SNX1-206ENST00000559389 SERPINE2P07093 398 aa17.08■□□□□ 0.32
SNX1-206ENST00000559389 RPA2P15927 270 aa17.08■□□□□ 0.32
SNX1-206ENST00000559389 SP6Q3SY56 376 aa17.08■□□□□ 0.32
SNX1-206ENST00000559389 SGPP2Q8IWX5 399 aa17.08■□□□□ 0.32
SNX1-206ENST00000559389 STPG2Q8N412 459 aa17.08■□□□□ 0.32
SNX1-206ENST00000559389 OR4A5Q8NH83 315 aa17.08■□□□□ 0.32
SNX1-206ENST00000559389 GALNT14Q96FL9 552 aa17.08■□□□□ 0.32
SNX1-206ENST00000559389 ZNF430Q9H8G1 570 aaPredicted RBP17.08■□□□□ 0.32
SNX1-206ENST00000559389 TMEM140Q9NV12 185 aa17.08■□□□□ 0.32
SNX1-206ENST00000559389 FBXO7Q9Y3I1 522 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms