RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 DOK5Q9P104 306 aa4.84□□□□□ -1.63
USP3-212ENST00000559276 IL19Q9UHD0 177 aa4.84□□□□□ -1.63
USP3-212ENST00000559276 AK3Q9UIJ7 227 aa4.84□□□□□ -1.63
USP3-212ENST00000559276 PITPNC1Q9UKF7 332 aa4.84□□□□□ -1.63
USP3-212ENST00000559276 FBXO7Q9Y3I1 522 aa4.84□□□□□ -1.63
USP3-212ENST00000559276 MMP24Q9Y5R2 645 aa4.84□□□□□ -1.63
USP3-212ENST00000559276 WSB1Q9Y6I7 421 aa4.84□□□□□ -1.63
USP3-212ENST00000559276 TMEM56-RWDD3S4R434 201 aa4.84□□□□□ -1.63
USP3-212ENST00000559276 IGHV3-64DA0A0J9YX35 117 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 A0A1W2PPE2 198 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 ZNF850A8MQ14 1090 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 SDCBPO00560 298 aaPredicted RBP4.83□□□□□ -1.64
USP3-212ENST00000559276 DVL1O14640 695 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 HSD17B6O14756 317 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 ST8SIA5O15466 376 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 TIMM8AO60220 97 aaPredicted RBP4.83□□□□□ -1.64
USP3-212ENST00000559276 HIST1H2BKO60814 126 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 FCN3O75636 299 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 SCAF4O95104 1147 aaKnown RBP4.83□□□□□ -1.64
USP3-212ENST00000559276 ZNF205O95201 554 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 CYB5R3P00387 301 aaPredicted RBP4.83□□□□□ -1.64
USP3-212ENST00000559276 IFNA1P01562 189 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 PF4P02776 101 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 HIST1H2BJP06899 126 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 CTXN2P0C2S0 81 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 OR5AC1P0C628 307 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 PPIAL4GP0DN37 164 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 TMEM225BP0DP42 221 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 SELEP16581 610 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 SERPINA2P20848 420 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 MDKP21741 143 aaPredicted RBP4.83□□□□□ -1.64
USP3-212ENST00000559276 FGF7P21781 194 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 HIST1H2BOP23527 126 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 HIST1H2BBP33778 126 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 MDH2P40926 338 aaKnown RBP4.83□□□□□ -1.64
USP3-212ENST00000559276 NKX2-1P43699 371 aaPredicted RBP4.83□□□□□ -1.64
USP3-212ENST00000559276 HIST1H2BDP58876 126 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 KRTAP10-3P60369 221 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 PCBD1P61457 104 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 HIST1H2BCP62807 126 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 VAMP2P63027 116 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 HLA-DRB3P79483 266 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 DLK1P80370 383 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 RELBQ01201 579 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 IL24Q13007 206 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 HIST2H2BEQ16778 126 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 KRTAP27-1Q3LI81 207 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 AKIRIN2Q53H80 203 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 COA6Q5JTJ3 125 aaKnown RBP4.83□□□□□ -1.64
USP3-212ENST00000559276 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.83□□□□□ -1.64
USP3-212ENST00000559276 FAM201AQ5SY85 155 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 AKR1C8PQ5T2L2 129 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 CRIP3Q6Q6R5 217 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 TREML4Q6UXN2 200 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 ZNF841Q6ZN19 808 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 ETV3LQ6ZN32 361 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 ZNF429Q86V71 674 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 FOXRED2Q8IWF2 684 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 HIST3H2BBQ8N257 126 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 BEND2Q8NDZ0 799 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 OR10AD1Q8NGE0 317 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 OR2G3Q8NGZ4 309 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 HIST1H2BHQ93079 126 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 SLAMF9Q96A28 289 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 MEGF10Q96KG7 1140 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 OR2V2Q96R30 315 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 HIST1H2BNQ99877 126 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 HIST1H2BMQ99879 126 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 SSX3Q99909 188 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 AGMATQ9BSE5 352 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 C2orf88Q9BSF0 95 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 PSMG3Q9BT73 122 aaPredicted RBP4.83□□□□□ -1.64
USP3-212ENST00000559276 SMIM3Q9BZL3 60 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 TMEM222Q9H0R3 208 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 WFDC1Q9HC57 220 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 PPP1R3CQ9UQK1 317 aa4.83□□□□□ -1.64
USP3-212ENST00000559276 RCL1Q9Y2P8 373 aaKnown RBP4.83□□□□□ -1.64
USP3-212ENST00000559276 PUS1Q9Y606 427 aaKnown RBP eCLIP4.83□□□□□ -1.64
USP3-212ENST00000559276 IGHV2-70DA0A0C4DH43 119 aa4.82□□□□□ -1.64
USP3-212ENST00000559276 KIR2DS1A0A191URI9 304 aa4.82□□□□□ -1.64
USP3-212ENST00000559276 C3orf85A0A1B0GTC6 90 aa4.82□□□□□ -1.64
USP3-212ENST00000559276 A0A1B0GU03 582 aa4.82□□□□□ -1.64
USP3-212ENST00000559276 LOC102723971A0A1B0GUV8 181 aa4.82□□□□□ -1.64
USP3-212ENST00000559276 A0A1W2PP11 408 aa4.82□□□□□ -1.64
USP3-212ENST00000559276 SMCO3A2RU48 225 aa4.82□□□□□ -1.64
USP3-212ENST00000559276 TRDCB7Z8K6 153 aa4.82□□□□□ -1.64
USP3-212ENST00000559276 C22orf46C9J442 243 aa4.82□□□□□ -1.64
USP3-212ENST00000559276 M0R135 149 aa4.82□□□□□ -1.64
USP3-212ENST00000559276 TNFRSF13BO14836 293 aaPredicted RBP4.82□□□□□ -1.64
USP3-212ENST00000559276 GEMIN2O14893 280 aaKnown RBP4.82□□□□□ -1.64
USP3-212ENST00000559276 RER1O15258 196 aa4.82□□□□□ -1.64
USP3-212ENST00000559276 SLC31A2O15432 143 aa4.82□□□□□ -1.64
USP3-212ENST00000559276 MPPED1O15442 326 aa4.82□□□□□ -1.64
USP3-212ENST00000559276 PDCD6O75340 191 aa4.82□□□□□ -1.64
USP3-212ENST00000559276 FSTL3O95633 263 aa4.82□□□□□ -1.64
USP3-212ENST00000559276 DIRAS3O95661 229 aa4.82□□□□□ -1.64
USP3-212ENST00000559276 GCGP01275 180 aa4.82□□□□□ -1.64
USP3-212ENST00000559276 IFNA5P01569 189 aa4.82□□□□□ -1.64
USP3-212ENST00000559276 ARG1P05089 322 aa4.82□□□□□ -1.64
USP3-212ENST00000559276 OR13C7P0DN81 318 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms