RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 XRCC3O43542 346 aa9.33□□□□□ -0.92
TPM1-216ENST00000558910 HPGDSO60760 199 aa9.33□□□□□ -0.92
TPM1-216ENST00000558910 DIRAS3O95661 229 aa9.33□□□□□ -0.92
TPM1-216ENST00000558910 HLA-DQB1P01920 261 aa9.33□□□□□ -0.92
TPM1-216ENST00000558910 TRGV3P03979 118 aa9.33□□□□□ -0.92
TPM1-216ENST00000558910 RPA2P15927 270 aa9.33□□□□□ -0.92
TPM1-216ENST00000558910 RFX2P48378 723 aa9.33□□□□□ -0.92
TPM1-216ENST00000558910 SLURP1P55000 103 aa9.33□□□□□ -0.92
TPM1-216ENST00000558910 SRSF7Q16629 238 aaKnown RBP eCLIP9.33□□□□□ -0.92
TPM1-216ENST00000558910 ZNF562Q6V9R5 426 aa9.33□□□□□ -0.92
TPM1-216ENST00000558910 MINDY2Q8NBR6 621 aa9.33□□□□□ -0.92
TPM1-216ENST00000558910 OR5M8Q8NGP6 311 aa9.33□□□□□ -0.92
TPM1-216ENST00000558910 OR13F1Q8NGS4 319 aa9.33□□□□□ -0.92
TPM1-216ENST00000558910 C4orf3Q8WVX3 66 aa9.33□□□□□ -0.92
TPM1-216ENST00000558910 SNAPC3Q92966 411 aa9.33□□□□□ -0.92
TPM1-216ENST00000558910 SLC25A46Q96AG3 418 aa9.33□□□□□ -0.92
TPM1-216ENST00000558910 RNF5Q99942 180 aa9.33□□□□□ -0.92
TPM1-216ENST00000558910 SLC5A7Q9GZV3 580 aa9.33□□□□□ -0.92
TPM1-216ENST00000558910 COA4Q9NYJ1 87 aa9.33□□□□□ -0.92
TPM1-216ENST00000558910 EHFQ9NZC4 300 aa9.33□□□□□ -0.92
TPM1-216ENST00000558910 NUBP2Q9Y5Y2 271 aa9.33□□□□□ -0.92
TPM1-216ENST00000558910 WI2-2373I1.2A0A1W2PRP0 233 aa9.32□□□□□ -0.92
TPM1-216ENST00000558910 SEC14L6B5MCN3 397 aa9.32□□□□□ -0.92
TPM1-216ENST00000558910 SPDEFO95238 335 aa9.32□□□□□ -0.92
TPM1-216ENST00000558910 PRH1P02810 166 aa9.32□□□□□ -0.92
TPM1-216ENST00000558910 SAA1P0DJI8 122 aaPredicted RBP9.32□□□□□ -0.92
TPM1-216ENST00000558910 HLA-DMAP28067 261 aa9.32□□□□□ -0.92
TPM1-216ENST00000558910 CD40LGP29965 261 aa9.32□□□□□ -0.92
TPM1-216ENST00000558910 LGALS7P47929 136 aa9.32□□□□□ -0.92
TPM1-216ENST00000558910 SCAND1P57086 179 aa9.32□□□□□ -0.92
TPM1-216ENST00000558910 KIAA0141Q14154 515 aaPredicted RBP9.32□□□□□ -0.92
TPM1-216ENST00000558910 TMEM177Q53S58 311 aa9.32□□□□□ -0.92
TPM1-216ENST00000558910 C10orf55Q5SWW7 151 aa9.32□□□□□ -0.92
TPM1-216ENST00000558910 KPRPQ5T749 579 aaPredicted RBP9.32□□□□□ -0.92
TPM1-216ENST00000558910 CROCCP3Q8IVE0 287 aa9.32□□□□□ -0.92
TPM1-216ENST00000558910 MFSD4AQ8N468 514 aa9.32□□□□□ -0.92
TPM1-216ENST00000558910 ADTRPQ96IZ2 230 aa9.32□□□□□ -0.92
TPM1-216ENST00000558910 TINAGL1Q9GZM7 467 aaPredicted RBP9.32□□□□□ -0.92
TPM1-216ENST00000558910 PRELID3BQ9Y3B1 194 aa9.32□□□□□ -0.92
TPM1-216ENST00000558910 IGHV4OR15-8A0A075B7B6 117 aa9.31□□□□□ -0.92
TPM1-216ENST00000558910 A0A087WW49 117 aa9.31□□□□□ -0.92
TPM1-216ENST00000558910 SMIM31A0A1B0GVY4 71 aa9.31□□□□□ -0.92
TPM1-216ENST00000558910 MSGN1A6NI15 193 aa9.31□□□□□ -0.92
TPM1-216ENST00000558910 SULT1C2O00338 296 aa9.31□□□□□ -0.92
TPM1-216ENST00000558910 LY86O95711 162 aa9.31□□□□□ -0.92
TPM1-216ENST00000558910 PPYP01298 95 aa9.31□□□□□ -0.92
TPM1-216ENST00000558910 IGLV2-14P01704 120 aa9.31□□□□□ -0.92
TPM1-216ENST00000558910 CRYGBP07316 175 aa9.31□□□□□ -0.92
TPM1-216ENST00000558910 RRASP10301 218 aa9.31□□□□□ -0.92
TPM1-216ENST00000558910 PRSS3P35030 304 aa9.31□□□□□ -0.92
TPM1-216ENST00000558910 HERV-K104P61576 105 aa9.31□□□□□ -0.92
TPM1-216ENST00000558910 SSBP2P81877 361 aaPredicted RBP9.31□□□□□ -0.92
TPM1-216ENST00000558910 ZNF616Q08AN1 781 aa9.31□□□□□ -0.92
TPM1-216ENST00000558910 CDK10Q15131 360 aa9.31□□□□□ -0.92
TPM1-216ENST00000558910 C19orf35Q6ZS72 473 aa9.31□□□□□ -0.92
TPM1-216ENST00000558910 GPR141Q7Z602 305 aa9.31□□□□□ -0.92
TPM1-216ENST00000558910 RNF152Q8N8N0 203 aa9.31□□□□□ -0.92
TPM1-216ENST00000558910 OR51H1Q8NH63 302 aa9.31□□□□□ -0.92
TPM1-216ENST00000558910 DDB2Q92466 427 aa9.31□□□□□ -0.92
TPM1-216ENST00000558910 UBE2E2Q96LR5 201 aa9.31□□□□□ -0.92
TPM1-216ENST00000558910 PRR25Q96S07 402 aa9.31□□□□□ -0.92
TPM1-216ENST00000558910 A0A0A6YYH2 397 aa9.3□□□□□ -0.92
TPM1-216ENST00000558910 C13orf42A0A1B0GVH6 325 aa9.3□□□□□ -0.92
TPM1-216ENST00000558910 A6NJ64 397 aa9.3□□□□□ -0.92
TPM1-216ENST00000558910 TRIM64CA6NLI5 447 aa9.3□□□□□ -0.92
TPM1-216ENST00000558910 I3L521 148 aa9.3□□□□□ -0.92
TPM1-216ENST00000558910 K7EIL1 84 aa9.3□□□□□ -0.92
TPM1-216ENST00000558910 ACTL6BO94805 426 aa9.3□□□□□ -0.92
TPM1-216ENST00000558910 MYOD1P15172 320 aa9.3□□□□□ -0.92
TPM1-216ENST00000558910 ELK1P19419 428 aa9.3□□□□□ -0.92
TPM1-216ENST00000558910 ECI1P42126 302 aa9.3□□□□□ -0.92
TPM1-216ENST00000558910 CBX5P45973 191 aa9.3□□□□□ -0.92
TPM1-216ENST00000558910 RORCP51449 518 aa9.3□□□□□ -0.92
TPM1-216ENST00000558910 UBE2KP61086 200 aa9.3□□□□□ -0.92
TPM1-216ENST00000558910 PRSS8Q16651 343 aa9.3□□□□□ -0.92
TPM1-216ENST00000558910 ASPHD1Q5U4P2 390 aa9.3□□□□□ -0.92
TPM1-216ENST00000558910 HAPLN4Q86UW8 402 aa9.3□□□□□ -0.92
TPM1-216ENST00000558910 CLVS1Q8IUQ0 354 aaPredicted RBP9.3□□□□□ -0.92
TPM1-216ENST00000558910 OR5AP2Q8NGF4 316 aa9.3□□□□□ -0.92
TPM1-216ENST00000558910 OR5H2Q8NGV7 314 aa9.3□□□□□ -0.92
TPM1-216ENST00000558910 DCUN1D4Q92564 292 aa9.3□□□□□ -0.92
TPM1-216ENST00000558910 FYTTD1Q96QD9 318 aaKnown RBP9.3□□□□□ -0.92
TPM1-216ENST00000558910 ZNF2Q9BSG1 426 aaPredicted RBP9.3□□□□□ -0.92
TPM1-216ENST00000558910 MRPS26Q9BYN8 205 aaKnown RBP9.3□□□□□ -0.92
TPM1-216ENST00000558910 ZNF430Q9H8G1 570 aaPredicted RBP9.3□□□□□ -0.92
TPM1-216ENST00000558910 HMX3A6NHT5 357 aa9.29□□□□□ -0.92
TPM1-216ENST00000558910 LINC01619G3V211 115 aa9.29□□□□□ -0.92
TPM1-216ENST00000558910 RAMP3O60896 148 aa9.29□□□□□ -0.92
TPM1-216ENST00000558910 SAP30O75446 220 aa9.29□□□□□ -0.92
TPM1-216ENST00000558910 DUS4LO95620 317 aaKnown RBP9.29□□□□□ -0.92
TPM1-216ENST00000558910 LGALS1P09382 135 aaKnown RBP9.29□□□□□ -0.92
TPM1-216ENST00000558910 OR8U8P0C7N1 319 aa9.29□□□□□ -0.92
TPM1-216ENST00000558910 SLC6A1P30531 599 aa9.29□□□□□ -0.92
TPM1-216ENST00000558910 AKIRIN2Q53H80 203 aa9.29□□□□□ -0.92
TPM1-216ENST00000558910 C19orf54Q5BKX5 351 aa9.29□□□□□ -0.92
TPM1-216ENST00000558910 AADACL3Q5VUY0 350 aa9.29□□□□□ -0.92
TPM1-216ENST00000558910 ZNF818PQ6ZRF7 136 aa9.29□□□□□ -0.92
TPM1-216ENST00000558910 SPAG16Q8N0X2 631 aa9.29□□□□□ -0.92
TPM1-216ENST00000558910 POC5Q8NA72 575 aa9.29□□□□□ -0.92
TPM1-216ENST00000558910 OR4S2Q8NH73 311 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms