RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 OR9G9P0C7N8 305 aa13.04□□□□□ -0.32
LRRC28-210ENST00000558879 NHLRC4P0CG21 123 aaPredicted RBP13.04□□□□□ -0.32
LRRC28-210ENST00000558879 SPNP16150 400 aa13.04□□□□□ -0.32
LRRC28-210ENST00000558879 ZP3P21754 424 aa13.04□□□□□ -0.32
LRRC28-210ENST00000558879 BRWD1-AS2P59051 145 aa13.04□□□□□ -0.32
LRRC28-210ENST00000558879 OR2B11Q5JQS5 317 aa13.04□□□□□ -0.32
LRRC28-210ENST00000558879 ZNF343Q6P1L6 599 aa13.04□□□□□ -0.32
LRRC28-210ENST00000558879 MMD2Q8IY49 270 aa13.04□□□□□ -0.32
LRRC28-210ENST00000558879 OR6Q1Q8NGQ2 317 aa13.04□□□□□ -0.32
LRRC28-210ENST00000558879 OR4S2Q8NH73 311 aa13.04□□□□□ -0.32
LRRC28-210ENST00000558879 ACOT12Q8WYK0 555 aa13.04□□□□□ -0.32
LRRC28-210ENST00000558879 SNAPC3Q92966 411 aa13.04□□□□□ -0.32
LRRC28-210ENST00000558879 YIPF6Q96EC8 236 aa13.04□□□□□ -0.32
LRRC28-210ENST00000558879 AUNIPQ9H7T9 357 aa13.04□□□□□ -0.32
LRRC28-210ENST00000558879 COA4Q9NYJ1 87 aa13.04□□□□□ -0.32
LRRC28-210ENST00000558879 MSGN1A6NI15 193 aa13.03□□□□□ -0.32
LRRC28-210ENST00000558879 LY86O95711 162 aa13.03□□□□□ -0.32
LRRC28-210ENST00000558879 APELAP0DMC3 54 aa13.03□□□□□ -0.32
LRRC28-210ENST00000558879 GP9P14770 177 aa13.03□□□□□ -0.32
LRRC28-210ENST00000558879 ARPC4P59998 168 aa13.03□□□□□ -0.32
LRRC28-210ENST00000558879 C10orf55Q5SWW7 151 aa13.03□□□□□ -0.32
LRRC28-210ENST00000558879 ZNF66Q6ZN08 573 aa13.03□□□□□ -0.32
LRRC28-210ENST00000558879 PUSL1Q8N0Z8 303 aaKnown RBP13.03□□□□□ -0.32
LRRC28-210ENST00000558879 USMG5Q96IX5 58 aa13.03□□□□□ -0.32
LRRC28-210ENST00000558879 WWC2-AS2Q96NR7 200 aa13.03□□□□□ -0.32
LRRC28-210ENST00000558879 PHB2Q99623 299 aa13.03□□□□□ -0.32
LRRC28-210ENST00000558879 SMAD5-AS1Q9Y6J3 95 aa13.03□□□□□ -0.32
LRRC28-210ENST00000558879 STAB2Q8WWQ8 2551 aa13.02□□□□□ -0.32
LRRC28-210ENST00000558879 TRBV9A0A0B4J1U6 114 aa13.02□□□□□ -0.33
LRRC28-210ENST00000558879 KBTBD11O94819 623 aa13.02□□□□□ -0.33
LRRC28-210ENST00000558879 PPYP01298 95 aa13.02□□□□□ -0.33
LRRC28-210ENST00000558879 IGLV1-51P01701 117 aa13.02□□□□□ -0.33
LRRC28-210ENST00000558879 PTHLHP12272 177 aa13.02□□□□□ -0.33
LRRC28-210ENST00000558879 KLF5Q13887 457 aaPredicted RBP13.02□□□□□ -0.33
LRRC28-210ENST00000558879 CROCCP3Q8IVE0 287 aa13.02□□□□□ -0.33
LRRC28-210ENST00000558879 OR13F1Q8NGS4 319 aa13.02□□□□□ -0.33
LRRC28-210ENST00000558879 TCTEX1D2Q8WW35 142 aa13.02□□□□□ -0.33
LRRC28-210ENST00000558879 DIABLOQ9NR28 239 aa13.02□□□□□ -0.33
LRRC28-210ENST00000558879 ANKRD34BA5PLL1 514 aa13.01□□□□□ -0.33
LRRC28-210ENST00000558879 TRIM64CA6NLI5 447 aa13.01□□□□□ -0.33
LRRC28-210ENST00000558879 AIREO43918 545 aa13.01□□□□□ -0.33
LRRC28-210ENST00000558879 TNFAIP8O95379 198 aa13.01□□□□□ -0.33
LRRC28-210ENST00000558879 TRBV12-3P01733 135 aa13.01□□□□□ -0.33
LRRC28-210ENST00000558879 FCGR2CP31995 323 aa13.01□□□□□ -0.33
LRRC28-210ENST00000558879 ZNF45Q02386 682 aa13.01□□□□□ -0.33
LRRC28-210ENST00000558879 MFSD4AQ8N468 514 aa13.01□□□□□ -0.33
LRRC28-210ENST00000558879 VSTM2AQ8TAG5 236 aa13.01□□□□□ -0.33
LRRC28-210ENST00000558879 TMEM167AQ8TBQ9 72 aa13.01□□□□□ -0.33
LRRC28-210ENST00000558879 OR4C12Q96R67 309 aa13.01□□□□□ -0.33
LRRC28-210ENST00000558879 SPIN2AQ99865 258 aa13.01□□□□□ -0.33
LRRC28-210ENST00000558879 SPIN2BQ9BPZ2 258 aa13.01□□□□□ -0.33
LRRC28-210ENST00000558879 TAS2R8Q9NYW2 309 aa13.01□□□□□ -0.33
LRRC28-210ENST00000558879 PEF1Q9UBV8 284 aaKnown RBP13.01□□□□□ -0.33
LRRC28-210ENST00000558879 ANAPC10Q9UM13 185 aa13.01□□□□□ -0.33
LRRC28-210ENST00000558879 A0A087WXM4 84 aa13□□□□□ -0.33
LRRC28-210ENST00000558879 FAM223BA6NKX1 122 aa13□□□□□ -0.33
LRRC28-210ENST00000558879 TEX22C9J3V5 150 aa13□□□□□ -0.33
LRRC28-210ENST00000558879 XRCC3O43542 346 aa13□□□□□ -0.33
LRRC28-210ENST00000558879 OR2A4O95047 310 aa13□□□□□ -0.33
LRRC28-210ENST00000558879 RPS19P39019 145 aaKnown RBP13□□□□□ -0.33
LRRC28-210ENST00000558879 KIR2DS2P43631 304 aa13□□□□□ -0.33
LRRC28-210ENST00000558879 CBX5P45973 191 aa13□□□□□ -0.33
LRRC28-210ENST00000558879 UBE2NLQ5JXB2 153 aa13□□□□□ -0.33
LRRC28-210ENST00000558879 IL34Q6ZMJ4 242 aa13□□□□□ -0.33
LRRC28-210ENST00000558879 HAPLN4Q86UW8 402 aa13□□□□□ -0.33
LRRC28-210ENST00000558879 FAM223AQ8IWN6 122 aa13□□□□□ -0.33
LRRC28-210ENST00000558879 VKORC1L1Q8N0U8 176 aa13□□□□□ -0.33
LRRC28-210ENST00000558879 TTC9CQ8N5M4 171 aa13□□□□□ -0.33
LRRC28-210ENST00000558879 TSPAN14Q8NG11 270 aa13□□□□□ -0.33
LRRC28-210ENST00000558879 OR5AP2Q8NGF4 316 aa13□□□□□ -0.33
LRRC28-210ENST00000558879 SECTM1Q8WVN6 248 aa13□□□□□ -0.33
LRRC28-210ENST00000558879 OR2A7Q96R45 310 aa13□□□□□ -0.33
LRRC28-210ENST00000558879 GPHA2Q96T91 129 aa13□□□□□ -0.33
LRRC28-210ENST00000558879 DCUN1D5Q9BTE7 237 aa13□□□□□ -0.33
LRRC28-210ENST00000558879 ELOVL1Q9BW60 279 aa13□□□□□ -0.33
LRRC28-210ENST00000558879 AKIP1Q9NQ31 210 aa13□□□□□ -0.33
LRRC28-210ENST00000558879 CCL28Q9NRJ3 127 aa13□□□□□ -0.33
LRRC28-210ENST00000558879 ADAM30Q9UKF2 790 aa13□□□□□ -0.33
LRRC28-210ENST00000558879 U3KQK5 164 aa13□□□□□ -0.33
LRRC28-210ENST00000558879 KMT2CQ8NEZ4 4911 aaKnown RBP12.99□□□□□ -0.33
LRRC28-210ENST00000558879 TENM3Q9P273 2699 aa12.99□□□□□ -0.33
LRRC28-210ENST00000558879 A0A1B0GW64 132 aa12.99□□□□□ -0.33
LRRC28-210ENST00000558879 MPPED1O15442 326 aa12.99□□□□□ -0.33
LRRC28-210ENST00000558879 ACTL6BO94805 426 aa12.99□□□□□ -0.33
LRRC28-210ENST00000558879 ZBTB34Q8NCN2 500 aa12.99□□□□□ -0.33
LRRC28-210ENST00000558879 OR9G4Q8NGQ1 327 aa12.99□□□□□ -0.33
LRRC28-210ENST00000558879 VCX3AQ9NNX9 186 aa12.99□□□□□ -0.33
LRRC28-210ENST00000558879 E7EUB6 86 aa12.98□□□□□ -0.33
LRRC28-210ENST00000558879 RBFOX2O43251 390 aaKnown RBP eCLIP12.98□□□□□ -0.33
LRRC28-210ENST00000558879 TNFSF12O43508 249 aa12.98□□□□□ -0.33
LRRC28-210ENST00000558879 PRH1P02810 166 aa12.98□□□□□ -0.33
LRRC28-210ENST00000558879 ZNF735P0CB33 412 aa12.98□□□□□ -0.33
LRRC28-210ENST00000558879 MAS1LP35410 378 aa12.98□□□□□ -0.33
LRRC28-210ENST00000558879 RPL27AP46776 148 aaKnown RBP12.98□□□□□ -0.33
LRRC28-210ENST00000558879 RHOGP84095 191 aa12.98□□□□□ -0.33
LRRC28-210ENST00000558879 EXOSC2Q13868 293 aaKnown RBP12.98□□□□□ -0.33
LRRC28-210ENST00000558879 KLK9Q2XQG4 91 aa12.98□□□□□ -0.33
LRRC28-210ENST00000558879 GIMAP1Q8WWP7 306 aa12.98□□□□□ -0.33
LRRC28-210ENST00000558879 ASCL2Q99929 193 aa12.98□□□□□ -0.33
LRRC28-210ENST00000558879 BET1LQ9NYM9 111 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms