RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 TOMM40LQ969M1 308 aa12.63□□□□□ -0.39
CDC42BPB-203ENST00000558867 G3V3Q6 166 aa12.62□□□□□ -0.39
CDC42BPB-203ENST00000558867 FGF16O43320 207 aa12.62□□□□□ -0.39
CDC42BPB-203ENST00000558867 TMEM11P17152 192 aa12.62□□□□□ -0.39
CDC42BPB-203ENST00000558867 RCC1P18754 421 aaPredicted RBP12.62□□□□□ -0.39
CDC42BPB-203ENST00000558867 AADACP22760 399 aa12.62□□□□□ -0.39
CDC42BPB-203ENST00000558867 H2BFSP57053 126 aa12.62□□□□□ -0.39
CDC42BPB-203ENST00000558867 ATXN7L3Q14CW9 347 aaPredicted RBP12.62□□□□□ -0.39
CDC42BPB-203ENST00000558867 C6orf183Q5T699 404 aa12.62□□□□□ -0.39
CDC42BPB-203ENST00000558867 LIN54Q6MZP7 749 aa12.62□□□□□ -0.39
CDC42BPB-203ENST00000558867 SLC35E3Q7Z769 313 aa12.62□□□□□ -0.39
CDC42BPB-203ENST00000558867 SGPP2Q8IWX5 399 aa12.62□□□□□ -0.39
CDC42BPB-203ENST00000558867 CCDC71LQ8N9Z2 235 aa12.62□□□□□ -0.39
CDC42BPB-203ENST00000558867 OR2T35Q8NGX2 323 aa12.62□□□□□ -0.39
CDC42BPB-203ENST00000558867 OR8U1Q8NH10 309 aa12.62□□□□□ -0.39
CDC42BPB-203ENST00000558867 COQ8AQ8NI60 647 aa12.62□□□□□ -0.39
CDC42BPB-203ENST00000558867 COQ2Q96H96 371 aa12.62□□□□□ -0.39
CDC42BPB-203ENST00000558867 TRAPPC2LQ9UL33 140 aa12.62□□□□□ -0.39
CDC42BPB-203ENST00000558867 FAM172BPA6NC97 362 aa12.61□□□□□ -0.39
CDC42BPB-203ENST00000558867 GOSR2O14653 212 aa12.61□□□□□ -0.39
CDC42BPB-203ENST00000558867 VAMP1P23763 118 aa12.61□□□□□ -0.39
CDC42BPB-203ENST00000558867 MSMO1Q15800 293 aa12.61□□□□□ -0.39
CDC42BPB-203ENST00000558867 CASC10Q5T4H9 136 aa12.61□□□□□ -0.39
CDC42BPB-203ENST00000558867 KCTD9Q7L273 389 aa12.61□□□□□ -0.39
CDC42BPB-203ENST00000558867 LRTM2Q8N967 370 aa12.61□□□□□ -0.39
CDC42BPB-203ENST00000558867 OR9G1Q8NH87 305 aa12.61□□□□□ -0.39
CDC42BPB-203ENST00000558867 OR10J5Q8NHC4 309 aa12.61□□□□□ -0.39
CDC42BPB-203ENST00000558867 KIRREL1Q96J84 757 aa12.61□□□□□ -0.39
CDC42BPB-203ENST00000558867 NOL4LQ96MY1 436 aaPredicted RBP12.61□□□□□ -0.39
CDC42BPB-203ENST00000558867 PRR25Q96S07 402 aa12.61□□□□□ -0.39
CDC42BPB-203ENST00000558867 ASCL2Q99929 193 aa12.61□□□□□ -0.39
CDC42BPB-203ENST00000558867 KCNIP1Q9NZI2 227 aa12.61□□□□□ -0.39
CDC42BPB-203ENST00000558867 OR6C3Q9NZP0 311 aa12.61□□□□□ -0.39
CDC42BPB-203ENST00000558867 OR2W1Q9Y3N9 320 aa12.61□□□□□ -0.39
CDC42BPB-203ENST00000558867 A0A087X0M5 115 aa12.6□□□□□ -0.39
CDC42BPB-203ENST00000558867 A0A1B0GX30 115 aa12.6□□□□□ -0.39
CDC42BPB-203ENST00000558867 ZNF729A6NN14 1252 aaPredicted RBP12.6□□□□□ -0.39
CDC42BPB-203ENST00000558867 FAM90A9PA6NNJ1 464 aa12.6□□□□□ -0.39
CDC42BPB-203ENST00000558867 LY6LH3BQJ8 138 aa12.6□□□□□ -0.39
CDC42BPB-203ENST00000558867 B3GALNT1O75752 331 aa12.6□□□□□ -0.39
CDC42BPB-203ENST00000558867 SNRNP70P08621 437 aaKnown RBP12.6□□□□□ -0.39
CDC42BPB-203ENST00000558867 NFYAP23511 347 aaPredicted RBP12.6□□□□□ -0.39
CDC42BPB-203ENST00000558867 NFYBP25208 207 aa12.6□□□□□ -0.39
CDC42BPB-203ENST00000558867 NKX2-5P52952 324 aaPredicted RBP12.6□□□□□ -0.39
CDC42BPB-203ENST00000558867 PIGPP57054 158 aa12.6□□□□□ -0.39
CDC42BPB-203ENST00000558867 AESQ08117 197 aa12.6□□□□□ -0.39
CDC42BPB-203ENST00000558867 CXorf66Q5JRM2 361 aaPredicted RBP12.6□□□□□ -0.39
CDC42BPB-203ENST00000558867 C5orf56Q8N8D9 126 aa12.6□□□□□ -0.39
CDC42BPB-203ENST00000558867 NAA60Q9H7X0 242 aa12.6□□□□□ -0.39
CDC42BPB-203ENST00000558867 TAF9BQ9HBM6 251 aa12.6□□□□□ -0.39
CDC42BPB-203ENST00000558867 SLC2A9Q9NRM0 540 aa12.6□□□□□ -0.39
CDC42BPB-203ENST00000558867 KIF25Q9UIL4 384 aa12.6□□□□□ -0.39
CDC42BPB-203ENST00000558867 KCNIP3Q9Y2W7 256 aa12.6□□□□□ -0.39
CDC42BPB-203ENST00000558867 PIGBOS1A0A0B4J2F0 54 aa12.59□□□□□ -0.39
CDC42BPB-203ENST00000558867 ODAMA1E959 279 aa12.59□□□□□ -0.39
CDC42BPB-203ENST00000558867 HMSDA8MTL9 139 aa12.59□□□□□ -0.39
CDC42BPB-203ENST00000558867 SEC14L6B5MCN3 397 aa12.59□□□□□ -0.39
CDC42BPB-203ENST00000558867 AP4M1O00189 453 aa12.59□□□□□ -0.39
CDC42BPB-203ENST00000558867 GPR31O00270 319 aa12.59□□□□□ -0.39
CDC42BPB-203ENST00000558867 BET1O15155 118 aa12.59□□□□□ -0.39
CDC42BPB-203ENST00000558867 IGHG2P01859 326 aa12.59□□□□□ -0.39
CDC42BPB-203ENST00000558867 PI3P19957 117 aa12.59□□□□□ -0.39
CDC42BPB-203ENST00000558867 GNRHRP30968 328 aa12.59□□□□□ -0.39
CDC42BPB-203ENST00000558867 GLIPR1P48060 266 aa12.59□□□□□ -0.39
CDC42BPB-203ENST00000558867 RAB7AP51149 207 aa12.59□□□□□ -0.39
CDC42BPB-203ENST00000558867 LUMP51884 338 aaPredicted RBP12.59□□□□□ -0.39
CDC42BPB-203ENST00000558867 CYCSP99999 105 aaKnown RBP12.59□□□□□ -0.39
CDC42BPB-203ENST00000558867 FGL1Q08830 312 aa12.59□□□□□ -0.39
CDC42BPB-203ENST00000558867 KRBOX4Q5JUW0 171 aa12.59□□□□□ -0.39
CDC42BPB-203ENST00000558867 C18orf65Q6ZTR6 163 aa12.59□□□□□ -0.39
CDC42BPB-203ENST00000558867 OR8H3Q8N146 312 aa12.59□□□□□ -0.39
CDC42BPB-203ENST00000558867 STPG2Q8N412 459 aa12.59□□□□□ -0.39
CDC42BPB-203ENST00000558867 ZNF565Q8N9K5 539 aa12.59□□□□□ -0.39
CDC42BPB-203ENST00000558867 RTN4IP1Q8WWV3 396 aaPredicted RBP12.59□□□□□ -0.39
CDC42BPB-203ENST00000558867 RAX2Q96IS3 184 aa12.59□□□□□ -0.39
CDC42BPB-203ENST00000558867 RAB9BQ9NP90 201 aa12.59□□□□□ -0.39
CDC42BPB-203ENST00000558867 KIAA2026Q5HYC2 2103 aa12.58□□□□□ -0.4
CDC42BPB-203ENST00000558867 LYL1P12980 280 aa12.58□□□□□ -0.4
CDC42BPB-203ENST00000558867 GZMHP20718 246 aa12.58□□□□□ -0.4
CDC42BPB-203ENST00000558867 FXYD4P59646 89 aa12.58□□□□□ -0.4
CDC42BPB-203ENST00000558867 SRPXP78539 464 aa12.58□□□□□ -0.4
CDC42BPB-203ENST00000558867 HTD2P86397 168 aa12.58□□□□□ -0.4
CDC42BPB-203ENST00000558867 ANKRD55Q3KP44 614 aa12.58□□□□□ -0.4
CDC42BPB-203ENST00000558867 LAMTOR1Q6IAA8 161 aa12.58□□□□□ -0.4
CDC42BPB-203ENST00000558867 LCNL1Q6ZST4 164 aa12.58□□□□□ -0.4
CDC42BPB-203ENST00000558867 C9orf62Q8N4C0 152 aa12.58□□□□□ -0.4
CDC42BPB-203ENST00000558867 DRAM1Q8N682 238 aa12.58□□□□□ -0.4
CDC42BPB-203ENST00000558867 ZBTB8BQ8NAP8 495 aaPredicted RBP12.58□□□□□ -0.4
CDC42BPB-203ENST00000558867 UXS1Q8NBZ7 420 aa12.58□□□□□ -0.4
CDC42BPB-203ENST00000558867 BVESQ8NE79 360 aa12.58□□□□□ -0.4
CDC42BPB-203ENST00000558867 OR11H4Q8NGC9 324 aa12.58□□□□□ -0.4
CDC42BPB-203ENST00000558867 CASTOR1Q8WTX7 329 aa12.58□□□□□ -0.4
CDC42BPB-203ENST00000558867 GALMQ96C23 342 aa12.58□□□□□ -0.4
CDC42BPB-203ENST00000558867 DUX3Q96PT4 197 aa12.58□□□□□ -0.4
CDC42BPB-203ENST00000558867 NMES1Q9C002 83 aa12.58□□□□□ -0.4
CDC42BPB-203ENST00000558867 LINC00527Q9UJ94 153 aa12.58□□□□□ -0.4
CDC42BPB-203ENST00000558867 ZNF256Q9Y2P7 627 aaPredicted RBP12.58□□□□□ -0.4
CDC42BPB-203ENST00000558867 SMAD5-AS1Q9Y6J3 95 aa12.58□□□□□ -0.4
CDC42BPB-203ENST00000558867 TEX13DA0A0J9YY54 714 aaPredicted RBP12.57□□□□□ -0.4
CDC42BPB-203ENST00000558867 KBTBD11-OT1A0A1B0GTJ5 212 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms