RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	FBXO7	Q9Y3I1	522 aa		5.43	□□□□□ -1.54
MARK3-215	ENST00000558787		V9GYH0	126 aa		5.43	□□□□□ -1.54
MARK3-215	ENST00000558787	TRAV41	A0A0B4J266	112 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	TMEM235	A6NFC5	223 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	GABARAP	H6UMI1	98 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	NBR2	O15453	112 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	GSTZ1	O43708	216 aa	Predicted RBP	5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	SOX15	O60248	233 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	YPEL1	O60688	119 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	HLA-DQB1	P01920	261 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	GSTT2B	P0CG30	244 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	CT45A6	P0DMU7	189 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	CT45A5	P0DMU8	189 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	CT45A7	P0DMV0	189 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	NAT1	P18440	290 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	DTYMK	P23919	212 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	PPIF	P30405	207 aa	Known RBP	5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	PPP5C	P53041	499 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	TMEM50B	P56557	158 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	LINC00205	P59089	165 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	HTD2	P86397	168 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	NDP	Q00604	133 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	ARFRP1	Q13795	201 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	HMGN3	Q15651	99 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	SRSF7	Q16629	238 aa	Known RBP eCLIP	5.42	□□□□□ -1.54	6e-6	■■■■□ 19.6
MARK3-215	ENST00000558787	ECSCR	Q19T08	205 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	C5orf64	Q2M2E5	130 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	TMEM30B	Q3MIR4	351 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	TMEM177	Q53S58	311 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	C9orf66	Q5T8R8	295 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	LIN54	Q6MZP7	749 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	TMEM65	Q6PI78	240 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	TRAT1	Q6PIZ9	186 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	ZNF833P	Q6ZTB9	187 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	SNX29P2	Q8IUI4	249 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787		Q8N402	240 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	ZNF491	Q8N8L2	437 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	DRAXIN	Q8NBI3	349 aa	Predicted RBP	5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	OR2AK2	Q8NG84	335 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	MYOZ3	Q8TDC0	251 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	SMIM4	Q8WVI0	70 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	C4orf3	Q8WVX3	66 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	GALM	Q96C23	342 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	ABHD14B	Q96IU4	210 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	YPEL2	Q96QA6	119 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	CLCC1	Q96S66	551 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	ABHD1	Q96SE0	405 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	CMSS1	Q9BQ75	279 aa	Known RBP	5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	SRR	Q9GZT4	340 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	IFI27L2	Q9H2X8	130 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	CHMP1A	Q9HD42	196 aa	Predicted RBP	5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	TAS2R8	Q9NYW2	309 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	OR1A1	Q9P1Q5	309 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	AK3	Q9UIJ7	227 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	JPT1	Q9UK76	154 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	GAB2	Q9UQC2	676 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	KCNK7	Q9Y2U2	307 aa		5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	LSM4	Q9Y4Z0	139 aa	Known RBP	5.42	□□□□□ -1.54
MARK3-215	ENST00000558787	TRBV6-6	A0A0A6YYG2	114 aa		5.41	□□□□□ -1.54
MARK3-215	ENST00000558787		I3L521	148 aa		5.41	□□□□□ -1.54
MARK3-215	ENST00000558787	RAMP3	O60896	148 aa		5.41	□□□□□ -1.54
MARK3-215	ENST00000558787	RBBP9	O75884	186 aa		5.41	□□□□□ -1.54
MARK3-215	ENST00000558787	RGS11	O94810	467 aa		5.41	□□□□□ -1.54
MARK3-215	ENST00000558787	LY86	O95711	162 aa		5.41	□□□□□ -1.54
MARK3-215	ENST00000558787	NAPSA	O96009	420 aa		5.41	□□□□□ -1.54
MARK3-215	ENST00000558787	HLA-DRB1	P01911	266 aa		5.41	□□□□□ -1.54
MARK3-215	ENST00000558787	SCT	P09683	121 aa		5.41	□□□□□ -1.54
MARK3-215	ENST00000558787	EGR2	P11161	476 aa	Predicted RBP	5.41	□□□□□ -1.54
MARK3-215	ENST00000558787	RCVRN	P35243	200 aa		5.41	□□□□□ -1.54
MARK3-215	ENST00000558787	RAB9A	P51151	201 aa		5.41	□□□□□ -1.54
MARK3-215	ENST00000558787	AP3S2	P59780	193 aa		5.41	□□□□□ -1.54
MARK3-215	ENST00000558787	FHL3	Q13643	280 aa		5.41	□□□□□ -1.54
MARK3-215	ENST00000558787	ZNF79	Q15937	498 aa		5.41	□□□□□ -1.54
MARK3-215	ENST00000558787	TRIQK	Q629K1	86 aa		5.41	□□□□□ -1.54
MARK3-215	ENST00000558787	MOB1B	Q7L9L4	216 aa		5.41	□□□□□ -1.54
MARK3-215	ENST00000558787	ZNF554	Q86TJ5	538 aa		5.41	□□□□□ -1.54
MARK3-215	ENST00000558787	NPB	Q8NG41	125 aa		5.41	□□□□□ -1.54
MARK3-215	ENST00000558787	GPX8	Q8TED1	209 aa		5.41	□□□□□ -1.54
MARK3-215	ENST00000558787	ABHD5	Q8WTS1	349 aa		5.41	□□□□□ -1.54
MARK3-215	ENST00000558787	DEDD2	Q8WXF8	326 aa		5.41	□□□□□ -1.54
MARK3-215	ENST00000558787	DCUN1D4	Q92564	292 aa		5.41	□□□□□ -1.54
MARK3-215	ENST00000558787	BORCS5	Q969J3	196 aa		5.41	□□□□□ -1.54
MARK3-215	ENST00000558787	UBE2E2	Q96LR5	201 aa		5.41	□□□□□ -1.54
MARK3-215	ENST00000558787	MS4A10	Q96PG2	267 aa		5.41	□□□□□ -1.54
MARK3-215	ENST00000558787	FAM103A1	Q9BTL3	118 aa	Known RBP	5.41	□□□□□ -1.54
MARK3-215	ENST00000558787	C11orf54	Q9H0W9	315 aa	Predicted RBP	5.41	□□□□□ -1.54
MARK3-215	ENST00000558787	IFT46	Q9NQC8	304 aa		5.41	□□□□□ -1.54
MARK3-215	ENST00000558787	SLC23A1	Q9UHI7	598 aa		5.41	□□□□□ -1.54
MARK3-215	ENST00000558787	VSIG4	Q9Y279	399 aa		5.41	□□□□□ -1.54
MARK3-215	ENST00000558787	DNAH7	Q8WXX0	4024 aa		5.4	□□□□□ -1.54
MARK3-215	ENST00000558787	HUWE1	Q7Z6Z7	4374 aa	Known RBP	5.4	□□□□□ -1.54
MARK3-215	ENST00000558787		A0A1W2PN81	502 aa		5.4	□□□□□ -1.54
MARK3-215	ENST00000558787		H0YJW9	148 aa		5.4	□□□□□ -1.54
MARK3-215	ENST00000558787		H7C2Y5	167 aa		5.4	□□□□□ -1.54
MARK3-215	ENST00000558787	RRH	O14718	337 aa		5.4	□□□□□ -1.54
MARK3-215	ENST00000558787	RAB29	O14966	203 aa		5.4	□□□□□ -1.54
MARK3-215	ENST00000558787	SSX5	O60225	188 aa		5.4	□□□□□ -1.54
MARK3-215	ENST00000558787	PROP1	O75360	226 aa		5.4	□□□□□ -1.54
MARK3-215	ENST00000558787	IGHV3-11	P01762	117 aa		5.4	□□□□□ -1.54
MARK3-215	ENST00000558787	FCGR3A	P08637	254 aa		5.4	□□□□□ -1.54

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