RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 ST3GAL4Q11206 333 aa8.57□□□□□ -1.04
SMAD3-206ENST00000558739 HMGN3Q15651 99 aa8.57□□□□□ -1.04
SMAD3-206ENST00000558739 TNXAQ16473 311 aa8.57□□□□□ -1.04
SMAD3-206ENST00000558739 SOHLH1Q5JUK2 328 aa8.57□□□□□ -1.04
SMAD3-206ENST00000558739 GPR148Q8TDV2 347 aa8.57□□□□□ -1.04
SMAD3-206ENST00000558739 NRG4Q8WWG1 115 aa8.57□□□□□ -1.04
SMAD3-206ENST00000558739 SRSF12Q8WXF0 261 aaKnown RBP8.57□□□□□ -1.04
SMAD3-206ENST00000558739 SMIM19Q96E16 107 aa8.57□□□□□ -1.04
SMAD3-206ENST00000558739 CPNE2Q96FN4 548 aaPredicted RBP8.57□□□□□ -1.04
SMAD3-206ENST00000558739 C18orf15Q96N68 181 aa8.57□□□□□ -1.04
SMAD3-206ENST00000558739 BANF2Q9H503 90 aa8.57□□□□□ -1.04
SMAD3-206ENST00000558739 STEAP1Q9UHE8 339 aa8.57□□□□□ -1.04
SMAD3-206ENST00000558739 PSORS1C1Q9UIG5 152 aa8.57□□□□□ -1.04
SMAD3-206ENST00000558739 LRP1Q07954 4544 aaKnown RBP8.57□□□□□ -1.04
SMAD3-206ENST00000558739 ELOA3CA0A087WX78 387 aaPredicted RBP8.56□□□□□ -1.04
SMAD3-206ENST00000558739 TRBV5-5A0A0J9YX44 114 aa8.56□□□□□ -1.04
SMAD3-206ENST00000558739 TSPAN4O14817 238 aa8.56□□□□□ -1.04
SMAD3-206ENST00000558739 GPX5O75715 221 aa8.56□□□□□ -1.04
SMAD3-206ENST00000558739 SCTP09683 121 aa8.56□□□□□ -1.04
SMAD3-206ENST00000558739 IGFBP3P17936 291 aaPredicted RBP8.56□□□□□ -1.04
SMAD3-206ENST00000558739 MYL12AP19105 171 aa8.56□□□□□ -1.04
SMAD3-206ENST00000558739 ZNF93P35789 620 aaPredicted RBP8.56□□□□□ -1.04
SMAD3-206ENST00000558739 RPS11P62280 158 aaKnown RBP eCLIP8.56□□□□□ -1.04
SMAD3-206ENST00000558739 MED21Q13503 144 aa8.56□□□□□ -1.04
SMAD3-206ENST00000558739 NR2C2APQ86WQ0 139 aa8.56□□□□□ -1.04
SMAD3-206ENST00000558739 PDPNQ86YL7 162 aa8.56□□□□□ -1.04
SMAD3-206ENST00000558739 PGLYRP3Q96LB9 341 aa8.56□□□□□ -1.04
SMAD3-206ENST00000558739 HARBI1Q96MB7 349 aa8.56□□□□□ -1.04
SMAD3-206ENST00000558739 OR14A2Q96R54 314 aa8.56□□□□□ -1.04
SMAD3-206ENST00000558739 C11orf54Q9H0W9 315 aaPredicted RBP8.56□□□□□ -1.04
SMAD3-206ENST00000558739 VCXQ9H320 206 aa8.56□□□□□ -1.04
SMAD3-206ENST00000558739 SPACA1Q9HBV2 294 aa8.56□□□□□ -1.04
SMAD3-206ENST00000558739 DEFB131BA0A096LNP1 70 aa8.55□□□□□ -1.04
SMAD3-206ENST00000558739 IFNA10P01566 189 aa8.55□□□□□ -1.04
SMAD3-206ENST00000558739 CD1AP06126 327 aa8.55□□□□□ -1.04
SMAD3-206ENST00000558739 CD2P06729 351 aa8.55□□□□□ -1.04
SMAD3-206ENST00000558739 FAM106AQ4KMX7 169 aa8.55□□□□□ -1.04
SMAD3-206ENST00000558739 SPATA12Q7Z6I5 190 aa8.55□□□□□ -1.04
SMAD3-206ENST00000558739 ZNF554Q86TJ5 538 aa8.55□□□□□ -1.04
SMAD3-206ENST00000558739 UBE2DNLQ8IWF7 75 aa8.55□□□□□ -1.04
SMAD3-206ENST00000558739 ACOT12Q8WYK0 555 aa8.55□□□□□ -1.04
SMAD3-206ENST00000558739 C5orf66Q9H5L9 145 aa8.55□□□□□ -1.04
SMAD3-206ENST00000558739 SLC35D1Q9NTN3 355 aa8.55□□□□□ -1.04
SMAD3-206ENST00000558739 HMX3A6NHT5 357 aa8.54□□□□□ -1.04
SMAD3-206ENST00000558739 M0R1X1 148 aa8.54□□□□□ -1.04
SMAD3-206ENST00000558739 CA11O75493 328 aa8.54□□□□□ -1.04
SMAD3-206ENST00000558739 APOA2P02652 100 aa8.54□□□□□ -1.04
SMAD3-206ENST00000558739 WNT4P56705 351 aa8.54□□□□□ -1.04
SMAD3-206ENST00000558739 TAS2R43P59537 309 aa8.54□□□□□ -1.04
SMAD3-206ENST00000558739 KRTAP10-2P60368 255 aa8.54□□□□□ -1.04
SMAD3-206ENST00000558739 PRSS8Q16651 343 aa8.54□□□□□ -1.04
SMAD3-206ENST00000558739 C12orf74Q32Q52 190 aa8.54□□□□□ -1.04
SMAD3-206ENST00000558739 YIF1BQ5BJH7 314 aa8.54□□□□□ -1.04
SMAD3-206ENST00000558739 OR4A47Q6IF82 309 aa8.54□□□□□ -1.04
SMAD3-206ENST00000558739 CEACAM19Q7Z692 300 aa8.54□□□□□ -1.04
SMAD3-206ENST00000558739 NANOGP1Q8N7R0 232 aa8.54□□□□□ -1.04
SMAD3-206ENST00000558739 BPIFB6Q8NFQ5 453 aa8.54□□□□□ -1.04
SMAD3-206ENST00000558739 C5orf30Q96GV9 206 aa8.54□□□□□ -1.04
SMAD3-206ENST00000558739 S100A13Q99584 98 aa8.54□□□□□ -1.04
SMAD3-206ENST00000558739 NDUFAF3Q9BU61 184 aa8.54□□□□□ -1.04
SMAD3-206ENST00000558739 SELENOIQ9C0D9 397 aa8.54□□□□□ -1.04
SMAD3-206ENST00000558739 IGHV3OR16-8A0A075B7F1 116 aa8.53□□□□□ -1.04
SMAD3-206ENST00000558739 TRBV5-7A0A0A0MS05 114 aa8.53□□□□□ -1.04
SMAD3-206ENST00000558739 MFSD2BA6NFX1 497 aa8.53□□□□□ -1.04
SMAD3-206ENST00000558739 CDK1P06493 297 aa8.53□□□□□ -1.04
SMAD3-206ENST00000558739 AQP4P55087 323 aa8.53□□□□□ -1.04
SMAD3-206ENST00000558739 TMEM187Q14656 261 aa8.53□□□□□ -1.04
SMAD3-206ENST00000558739 Q499Y3 187 aa8.53□□□□□ -1.04
SMAD3-206ENST00000558739 FAM209BQ5JX69 171 aa8.53□□□□□ -1.04
SMAD3-206ENST00000558739 AHSA2Q719I0 299 aa8.53□□□□□ -1.04
SMAD3-206ENST00000558739 SVOPQ8N4V2 548 aa8.53□□□□□ -1.04
SMAD3-206ENST00000558739 OR13C5Q8NGS8 318 aa8.53□□□□□ -1.04
SMAD3-206ENST00000558739 EDARADDQ8WWZ3 215 aa8.53□□□□□ -1.04
SMAD3-206ENST00000558739 MUL1Q969V5 352 aa8.53□□□□□ -1.04
SMAD3-206ENST00000558739 FANCD2OSQ96PS1 177 aa8.53□□□□□ -1.04
SMAD3-206ENST00000558739 ZNF184Q99676 751 aaPredicted RBP8.53□□□□□ -1.04
SMAD3-206ENST00000558739 TMEM138Q9NPI0 162 aa8.53□□□□□ -1.04
SMAD3-206ENST00000558739 PAK1IP1Q9NWT1 392 aaPredicted RBP8.53□□□□□ -1.04
SMAD3-206ENST00000558739 A0A1B0GW64 132 aa8.52□□□□□ -1.05
SMAD3-206ENST00000558739 OR4C46A6NHA9 309 aa8.52□□□□□ -1.05
SMAD3-206ENST00000558739 ZNF780AO75290 641 aaPredicted RBP8.52□□□□□ -1.05
SMAD3-206ENST00000558739 GIG44P09565 113 aaPredicted RBP8.52□□□□□ -1.05
SMAD3-206ENST00000558739 RPA2P15927 270 aa8.52□□□□□ -1.05
SMAD3-206ENST00000558739 MGMTP16455 207 aa8.52□□□□□ -1.05
SMAD3-206ENST00000558739 FUT3P21217 361 aa8.52□□□□□ -1.05
SMAD3-206ENST00000558739 BDKRB2P30411 391 aa8.52□□□□□ -1.05
SMAD3-206ENST00000558739 ADMP35318 185 aa8.52□□□□□ -1.05
SMAD3-206ENST00000558739 TFPI2P48307 235 aa8.52□□□□□ -1.05
SMAD3-206ENST00000558739 Q5VSD8 79 aa8.52□□□□□ -1.05
SMAD3-206ENST00000558739 GLIPR1L1Q6UWM5 242 aa8.52□□□□□ -1.05
SMAD3-206ENST00000558739 TTC9CQ8N5M4 171 aa8.52□□□□□ -1.05
SMAD3-206ENST00000558739 ZFP41Q8N8Y5 198 aa8.52□□□□□ -1.05
SMAD3-206ENST00000558739 MARC2Q969Z3 335 aa8.52□□□□□ -1.05
SMAD3-206ENST00000558739 Q96M66 194 aa8.52□□□□□ -1.05
SMAD3-206ENST00000558739 ZNF430Q9H8G1 570 aaPredicted RBP8.52□□□□□ -1.05
SMAD3-206ENST00000558739 MRPL27Q9P0M9 148 aaKnown RBP8.52□□□□□ -1.05
SMAD3-206ENST00000558739 ABRACLQ9P1F3 81 aa8.52□□□□□ -1.05
SMAD3-206ENST00000558739 LSM2Q9Y333 95 aaKnown RBP8.52□□□□□ -1.05
SMAD3-206ENST00000558739 TRAV8-7A0A075B6U6 113 aa8.51□□□□□ -1.05
SMAD3-206ENST00000558739 TEX22C9J3V5 150 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms