RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 CD99P14209 185 aa11.96□□□□□ -0.49
VPS18-202ENST00000558474 RPS16P62249 146 aaKnown RBP11.96□□□□□ -0.49
VPS18-202ENST00000558474 SCGB2A2Q13296 93 aa11.96□□□□□ -0.49
VPS18-202ENST00000558474 H2BFWTQ7Z2G1 175 aa11.96□□□□□ -0.49
VPS18-202ENST00000558474 DMBX1Q8NFW5 382 aa11.96□□□□□ -0.49
VPS18-202ENST00000558474 RNASE11Q8TAA1 199 aaKnown RBP11.96□□□□□ -0.49
VPS18-202ENST00000558474 C17orf50Q8WW18 174 aa11.96□□□□□ -0.49
VPS18-202ENST00000558474 RHOVQ96L33 236 aa11.96□□□□□ -0.49
VPS18-202ENST00000558474 HARBI1Q96MB7 349 aa11.96□□□□□ -0.49
VPS18-202ENST00000558474 ZFP57Q9NU63 452 aa11.96□□□□□ -0.49
VPS18-202ENST00000558474 BET1LQ9NYM9 111 aa11.96□□□□□ -0.49
VPS18-202ENST00000558474 CCDC168Q8NDH2 2452 aa11.96□□□□□ -0.5
VPS18-202ENST00000558474 IGHV3OR16-10A0A075B7F0 116 aa11.95□□□□□ -0.5
VPS18-202ENST00000558474 C5orf51A6NDU8 294 aa11.95□□□□□ -0.5
VPS18-202ENST00000558474 CCNKO75909 580 aa11.95□□□□□ -0.5
VPS18-202ENST00000558474 IL6RP08887 468 aaPredicted RBP11.95□□□□□ -0.5
VPS18-202ENST00000558474 CXCL3P19876 107 aa11.95□□□□□ -0.5
VPS18-202ENST00000558474 G6PCP35575 357 aa11.95□□□□□ -0.5
VPS18-202ENST00000558474 UBE2KP61086 200 aa11.95□□□□□ -0.5
VPS18-202ENST00000558474 RAP2BP61225 183 aa11.95□□□□□ -0.5
VPS18-202ENST00000558474 C2orf68Q2NKX9 166 aa11.95□□□□□ -0.5
VPS18-202ENST00000558474 LRRC75BQ2VPJ9 315 aa11.95□□□□□ -0.5
VPS18-202ENST00000558474 VMA21Q3ZAQ7 101 aa11.95□□□□□ -0.5
VPS18-202ENST00000558474 FAM120AOSQ5T036 256 aa11.95□□□□□ -0.5
VPS18-202ENST00000558474 THOC7Q6I9Y2 204 aaKnown RBP11.95□□□□□ -0.5
VPS18-202ENST00000558474 AKAP14Q86UN6 197 aa11.95□□□□□ -0.5
VPS18-202ENST00000558474 TEX45Q8NA69 505 aa11.95□□□□□ -0.5
VPS18-202ENST00000558474 GPR146Q96CH1 333 aa11.95□□□□□ -0.5
VPS18-202ENST00000558474 PDCD10Q9BUL8 212 aa11.95□□□□□ -0.5
VPS18-202ENST00000558474 PRDM13Q9H4Q3 707 aa11.95□□□□□ -0.5
VPS18-202ENST00000558474 YAE1D1Q9NRH1 226 aa11.95□□□□□ -0.5
VPS18-202ENST00000558474 ABCA1O95477 2261 aa11.94□□□□□ -0.5
VPS18-202ENST00000558474 FAM90A26D6RGX4 464 aa11.94□□□□□ -0.5
VPS18-202ENST00000558474 IGKV1D-33P01593 117 aa11.94□□□□□ -0.5
VPS18-202ENST00000558474 IGKV1-33P01594 117 aa11.94□□□□□ -0.5
VPS18-202ENST00000558474 SNRNP70P08621 437 aaKnown RBP11.94□□□□□ -0.5
VPS18-202ENST00000558474 H2BFSP57053 126 aa11.94□□□□□ -0.5
VPS18-202ENST00000558474 SMCO1Q147U7 214 aa11.94□□□□□ -0.5
VPS18-202ENST00000558474 IAH1Q2TAA2 248 aaPredicted RBP11.94□□□□□ -0.5
VPS18-202ENST00000558474 AARDQ4LEZ3 155 aa11.94□□□□□ -0.5
VPS18-202ENST00000558474 FOXRED2Q8IWF2 684 aa11.94□□□□□ -0.5
VPS18-202ENST00000558474 PUSL1Q8N0Z8 303 aaKnown RBP11.94□□□□□ -0.5
VPS18-202ENST00000558474 Q8N6K4 173 aa11.94□□□□□ -0.5
VPS18-202ENST00000558474 NPBQ8NG41 125 aa11.94□□□□□ -0.5
VPS18-202ENST00000558474 EAF1Q96JC9 268 aaPredicted RBP11.94□□□□□ -0.5
VPS18-202ENST00000558474 OR10C1Q96KK4 312 aa11.94□□□□□ -0.5
VPS18-202ENST00000558474 RANBP3Q9H6Z4 567 aaPredicted RBP11.94□□□□□ -0.5
VPS18-202ENST00000558474 TMEM140Q9NV12 185 aa11.94□□□□□ -0.5
VPS18-202ENST00000558474 C1RLQ9NZP8 487 aa11.94□□□□□ -0.5
VPS18-202ENST00000558474 IGHV3-72A0A0B4J1Y9 119 aa11.93□□□□□ -0.5
VPS18-202ENST00000558474 C13orf42A0A1B0GVH6 325 aa11.93□□□□□ -0.5
VPS18-202ENST00000558474 SRRM4A7MD48 611 aaKnown RBP11.93□□□□□ -0.5
VPS18-202ENST00000558474 FAM25EA8MYX2 175 aa11.93□□□□□ -0.5
VPS18-202ENST00000558474 CCSO14618 274 aa11.93□□□□□ -0.5
VPS18-202ENST00000558474 PFDN1O60925 122 aa11.93□□□□□ -0.5
VPS18-202ENST00000558474 PITX3O75364 302 aa11.93□□□□□ -0.5
VPS18-202ENST00000558474 NDUFA3O95167 84 aa11.93□□□□□ -0.5
VPS18-202ENST00000558474 IGLV2-23P01705 113 aa11.93□□□□□ -0.5
VPS18-202ENST00000558474 FGL1Q08830 312 aa11.93□□□□□ -0.5
VPS18-202ENST00000558474 IL15RAQ13261 267 aa11.93□□□□□ -0.5
VPS18-202ENST00000558474 TUSC1Q2TAM9 212 aa11.93□□□□□ -0.5
VPS18-202ENST00000558474 OR4A47Q6IF82 309 aa11.93□□□□□ -0.5
VPS18-202ENST00000558474 ZNF429Q86V71 674 aa11.93□□□□□ -0.5
VPS18-202ENST00000558474 TCTE3Q8IZS6 198 aa11.93□□□□□ -0.5
VPS18-202ENST00000558474 ZBTB8BQ8NAP8 495 aaPredicted RBP11.93□□□□□ -0.5
VPS18-202ENST00000558474 TMEM167AQ8TBQ9 72 aa11.93□□□□□ -0.5
VPS18-202ENST00000558474 NEURL2Q9BR09 285 aa11.93□□□□□ -0.5
VPS18-202ENST00000558474 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.93□□□□□ -0.5
VPS18-202ENST00000558474 FKBP11Q9NYL4 201 aa11.93□□□□□ -0.5
VPS18-202ENST00000558474 PITPNC1Q9UKF7 332 aa11.93□□□□□ -0.5
VPS18-202ENST00000558474 MPTX1A8MV57 137 aa11.92□□□□□ -0.5
VPS18-202ENST00000558474 SNAPC5O75971 98 aa11.92□□□□□ -0.5
VPS18-202ENST00000558474 KBTBD11O94819 623 aa11.92□□□□□ -0.5
VPS18-202ENST00000558474 SIX6O95475 246 aa11.92□□□□□ -0.5
VPS18-202ENST00000558474 SAA1P0DJI8 122 aaPredicted RBP11.92□□□□□ -0.5
VPS18-202ENST00000558474 TMEM11P17152 192 aa11.92□□□□□ -0.5
VPS18-202ENST00000558474 MAS1LP35410 378 aa11.92□□□□□ -0.5
VPS18-202ENST00000558474 HES1Q14469 280 aa11.92□□□□□ -0.5
VPS18-202ENST00000558474 PSG5Q15238 335 aa11.92□□□□□ -0.5
VPS18-202ENST00000558474 C16orf82Q7Z2V1 217 aa11.92□□□□□ -0.5
VPS18-202ENST00000558474 OR4D5Q8NGN0 318 aa11.92□□□□□ -0.5
VPS18-202ENST00000558474 OR52E5Q8NH55 327 aa11.92□□□□□ -0.5
VPS18-202ENST00000558474 OR4A16Q8NH70 328 aa11.92□□□□□ -0.5
VPS18-202ENST00000558474 OR5R1Q8NH85 324 aa11.92□□□□□ -0.5
VPS18-202ENST00000558474 PPP1R14BQ96C90 147 aa11.92□□□□□ -0.5
VPS18-202ENST00000558474 ST6GAL2Q96JF0 529 aa11.92□□□□□ -0.5
VPS18-202ENST00000558474 FYTTD1Q96QD9 318 aaKnown RBP11.92□□□□□ -0.5
VPS18-202ENST00000558474 SSX3Q99909 188 aa11.92□□□□□ -0.5
VPS18-202ENST00000558474 KIAA1456Q9P272 454 aa11.92□□□□□ -0.5
VPS18-202ENST00000558474 PRNDQ9UKY0 176 aa11.92□□□□□ -0.5
VPS18-202ENST00000558474 FLNAP21333 2647 aaKnown RBP11.92□□□□□ -0.5
VPS18-202ENST00000558474 MYO9AB2RTY4 2548 aa11.92□□□□□ -0.5
VPS18-202ENST00000558474 A0A0G2JRQ6 117 aa11.91□□□□□ -0.5
VPS18-202ENST00000558474 UPK2O00526 184 aa11.91□□□□□ -0.5
VPS18-202ENST00000558474 NBR2O15453 112 aa11.91□□□□□ -0.5
VPS18-202ENST00000558474 LY86O95711 162 aa11.91□□□□□ -0.5
VPS18-202ENST00000558474 LY6G6DO95868 133 aa11.91□□□□□ -0.5
VPS18-202ENST00000558474 CRYGBP07316 175 aa11.91□□□□□ -0.5
VPS18-202ENST00000558474 PET100P0DJ07 73 aa11.91□□□□□ -0.5
VPS18-202ENST00000558474 SRP14P37108 136 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms