RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 OR4D10Q8NGI6 311 aa9.7□□□□□ -0.86
SMAD3-205ENST00000558428 FAM110DQ8TAY7 271 aaPredicted RBP9.7□□□□□ -0.86
SMAD3-205ENST00000558428 SOSTQ9BQB4 213 aa9.7□□□□□ -0.86
SMAD3-205ENST00000558428 FAM103A1Q9BTL3 118 aaKnown RBP9.7□□□□□ -0.86
SMAD3-205ENST00000558428 FBXO7Q9Y3I1 522 aa9.7□□□□□ -0.86
SMAD3-205ENST00000558428 GSTZ1O43708 216 aaPredicted RBP9.69□□□□□ -0.86
SMAD3-205ENST00000558428 PGLYRP1O75594 196 aaPredicted RBP9.69□□□□□ -0.86
SMAD3-205ENST00000558428 CNIH1O95406 144 aa9.69□□□□□ -0.86
SMAD3-205ENST00000558428 RLN1P04808 185 aa9.69□□□□□ -0.86
SMAD3-205ENST00000558428 EGR2P11161 476 aaPredicted RBP9.69□□□□□ -0.86
SMAD3-205ENST00000558428 PGAM2P15259 253 aa9.69□□□□□ -0.86
SMAD3-205ENST00000558428 S100GP29377 79 aa9.69□□□□□ -0.86
SMAD3-205ENST00000558428 CFHR3Q02985 330 aa9.69□□□□□ -0.86
SMAD3-205ENST00000558428 TMEM267Q0VDI3 215 aaPredicted RBP9.69□□□□□ -0.86
SMAD3-205ENST00000558428 PJVKQ0ZLH3 352 aa9.69□□□□□ -0.86
SMAD3-205ENST00000558428 FXYD3Q14802 87 aa9.69□□□□□ -0.86
SMAD3-205ENST00000558428 PHLDA2Q53GA4 152 aa9.69□□□□□ -0.86
SMAD3-205ENST00000558428 CXorf66Q5JRM2 361 aaPredicted RBP9.69□□□□□ -0.86
SMAD3-205ENST00000558428 IDO2Q6ZQW0 420 aa9.69□□□□□ -0.86
SMAD3-205ENST00000558428 LCNL1Q6ZST4 164 aa9.69□□□□□ -0.86
SMAD3-205ENST00000558428 SLC38A6Q8IZM9 456 aa9.69□□□□□ -0.86
SMAD3-205ENST00000558428 VKORC1L1Q8N0U8 176 aa9.69□□□□□ -0.86
SMAD3-205ENST00000558428 POC5Q8NA72 575 aa9.69□□□□□ -0.86
SMAD3-205ENST00000558428 OR4F17Q8NGA8 305 aa9.69□□□□□ -0.86
SMAD3-205ENST00000558428 GRPEL2Q8TAA5 225 aa9.69□□□□□ -0.86
SMAD3-205ENST00000558428 ARPC1AQ92747 370 aa9.69□□□□□ -0.86
SMAD3-205ENST00000558428 R3HDM4Q96D70 268 aa9.69□□□□□ -0.86
SMAD3-205ENST00000558428 OR4F4Q96R69 305 aa9.69□□□□□ -0.86
SMAD3-205ENST00000558428 A0A1W2PN81 502 aa9.68□□□□□ -0.86
SMAD3-205ENST00000558428 ARPC1BO15143 372 aaKnown RBP9.68□□□□□ -0.86
SMAD3-205ENST00000558428 RBFOX2O43251 390 aaKnown RBP eCLIP9.68□□□□□ -0.86
SMAD3-205ENST00000558428 RAMP3O60896 148 aa9.68□□□□□ -0.86
SMAD3-205ENST00000558428 HRASP01112 189 aa9.68□□□□□ -0.86
SMAD3-205ENST00000558428 IGHG4P01861 327 aa9.68□□□□□ -0.86
SMAD3-205ENST00000558428 ELANEP08246 267 aa9.68□□□□□ -0.86
SMAD3-205ENST00000558428 AKAIN1P0CW23 69 aa9.68□□□□□ -0.86
SMAD3-205ENST00000558428 PPIFP30405 207 aaKnown RBP9.68□□□□□ -0.86
SMAD3-205ENST00000558428 CHRNA7P36544 502 aa9.68□□□□□ -0.86
SMAD3-205ENST00000558428 CRIP2P52943 208 aaPredicted RBP9.68□□□□□ -0.86
SMAD3-205ENST00000558428 PPP5CP53041 499 aa9.68□□□□□ -0.86
SMAD3-205ENST00000558428 UCP3P55916 312 aa9.68□□□□□ -0.86
SMAD3-205ENST00000558428 RPL23AP62750 156 aaKnown RBP9.68□□□□□ -0.86
SMAD3-205ENST00000558428 FOXE3Q13461 319 aa9.68□□□□□ -0.86
SMAD3-205ENST00000558428 MEF2DQ14814 521 aa9.68□□□□□ -0.86
SMAD3-205ENST00000558428 TNXAQ16473 311 aa9.68□□□□□ -0.86
SMAD3-205ENST00000558428 SCGB2B2Q4G0G5 96 aa9.68□□□□□ -0.86
SMAD3-205ENST00000558428 PYDC2Q56P42 97 aa9.68□□□□□ -0.86
SMAD3-205ENST00000558428 FAAP20Q6NZ36 180 aa9.68□□□□□ -0.86
SMAD3-205ENST00000558428 UNQ5815/PRO19632Q6UWF5 114 aa9.68□□□□□ -0.86
SMAD3-205ENST00000558428 SSX9Q7RTT3 188 aa9.68□□□□□ -0.86
SMAD3-205ENST00000558428 CCDC190Q86UF4 302 aa9.68□□□□□ -0.86
SMAD3-205ENST00000558428 CD300LFQ8TDQ1 290 aa9.68□□□□□ -0.86
SMAD3-205ENST00000558428 RSRP1Q9BUV0 290 aa9.68□□□□□ -0.86
SMAD3-205ENST00000558428 ZFP57Q9NU63 452 aa9.68□□□□□ -0.86
SMAD3-205ENST00000558428 NUBP2Q9Y5Y2 271 aa9.68□□□□□ -0.86
SMAD3-205ENST00000558428 V9GYH0 126 aa9.68□□□□□ -0.86
SMAD3-205ENST00000558428 NBEAL1Q6ZS30 2694 aa9.67□□□□□ -0.86
SMAD3-205ENST00000558428 ANKRD20A5PA0PJZ0 165 aa9.67□□□□□ -0.86
SMAD3-205ENST00000558428 NUDT19A8MXV4 375 aa9.67□□□□□ -0.86
SMAD3-205ENST00000558428 DISC1C4P0D8 188 aa9.67□□□□□ -0.86
SMAD3-205ENST00000558428 CREBL2O60519 120 aaPredicted RBP9.67□□□□□ -0.86
SMAD3-205ENST00000558428 OR2A4O95047 310 aa9.67□□□□□ -0.86
SMAD3-205ENST00000558428 HPRT1P00492 218 aa9.67□□□□□ -0.86
SMAD3-205ENST00000558428 RPLP1P05386 114 aaKnown RBP9.67□□□□□ -0.86
SMAD3-205ENST00000558428 PF4V1P10720 104 aa9.67□□□□□ -0.86
SMAD3-205ENST00000558428 SSBP2P81877 361 aaPredicted RBP9.67□□□□□ -0.86
SMAD3-205ENST00000558428 PRSS8Q16651 343 aa9.67□□□□□ -0.86
SMAD3-205ENST00000558428 MRGPRG-AS1Q2M3A8 158 aa9.67□□□□□ -0.86
SMAD3-205ENST00000558428 C19orf54Q5BKX5 351 aa9.67□□□□□ -0.86
SMAD3-205ENST00000558428 SPANXN2Q5MJ10 180 aa9.67□□□□□ -0.86
SMAD3-205ENST00000558428 TMEM65Q6PI78 240 aa9.67□□□□□ -0.86
SMAD3-205ENST00000558428 LHFPL1Q86WI0 220 aa9.67□□□□□ -0.86
SMAD3-205ENST00000558428 TCTEX1D1Q8N7M0 179 aa9.67□□□□□ -0.86
SMAD3-205ENST00000558428 MINDY2Q8NBR6 621 aa9.67□□□□□ -0.86
SMAD3-205ENST00000558428 LFNGQ8NES3 379 aa9.67□□□□□ -0.86
SMAD3-205ENST00000558428 OR4C16Q8NGL9 310 aa9.67□□□□□ -0.86
SMAD3-205ENST00000558428 VSTM2AQ8TAG5 236 aa9.67□□□□□ -0.86
SMAD3-205ENST00000558428 RHOVQ96L33 236 aa9.67□□□□□ -0.86
SMAD3-205ENST00000558428 OR2A7Q96R45 310 aa9.67□□□□□ -0.86
SMAD3-205ENST00000558428 THAP7Q9BT49 309 aaPredicted RBP9.67□□□□□ -0.86
SMAD3-205ENST00000558428 ZNF430Q9H8G1 570 aaPredicted RBP9.67□□□□□ -0.86
SMAD3-205ENST00000558428 FOXA2Q9Y261 457 aaPredicted RBP9.67□□□□□ -0.86
SMAD3-205ENST00000558428 NOTCH3Q9UM47 2321 aa9.67□□□□□ -0.86
SMAD3-205ENST00000558428 ACTL6BO94805 426 aa9.66□□□□□ -0.86
SMAD3-205ENST00000558428 KBTBD11O94819 623 aa9.66□□□□□ -0.86
SMAD3-205ENST00000558428 S1PR2O95136 353 aa9.66□□□□□ -0.86
SMAD3-205ENST00000558428 ZNF735P0CB33 412 aa9.66□□□□□ -0.86
SMAD3-205ENST00000558428 NQO2P16083 231 aa9.66□□□□□ -0.86
SMAD3-205ENST00000558428 F2RP25116 425 aa9.66□□□□□ -0.86
SMAD3-205ENST00000558428 PTBP1P26599 531 aaKnown RBP eCLIP9.66□□□□□ -0.861e-7■□□□□ 8.8
SMAD3-205ENST00000558428 PSMB8P28062 276 aa9.66□□□□□ -0.86
SMAD3-205ENST00000558428 TAS2R31P59538 309 aa9.66□□□□□ -0.86
SMAD3-205ENST00000558428 ZNF79Q15937 498 aa9.66□□□□□ -0.86
SMAD3-205ENST00000558428 AKIRIN2Q53H80 203 aa9.66□□□□□ -0.86
SMAD3-205ENST00000558428 C18orf65Q6ZTR6 163 aa9.66□□□□□ -0.86
SMAD3-205ENST00000558428 TBC1D26Q86UD7 250 aa9.66□□□□□ -0.86
SMAD3-205ENST00000558428 MMD2Q8IY49 270 aa9.66□□□□□ -0.86
SMAD3-205ENST00000558428 PUSL1Q8N0Z8 303 aaKnown RBP9.66□□□□□ -0.86
SMAD3-205ENST00000558428 Q8N402 240 aa9.66□□□□□ -0.86
SMAD3-205ENST00000558428 RNF152Q8N8N0 203 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms