RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 CHCHD5Q9BSY4 110 aa3.08□□□□□ -1.92
LRRC28-205ENST00000558248 POLR2J2Q9GZM3 115 aaKnown RBP3.08□□□□□ -1.92
LRRC28-205ENST00000558248 POLR2J3Q9H1A7 115 aaKnown RBP3.08□□□□□ -1.92
LRRC28-205ENST00000558248 ZDHHC11Q9H8X9 412 aa3.08□□□□□ -1.92
LRRC28-205ENST00000558248 HES4Q9HCC6 221 aa3.08□□□□□ -1.92
LRRC28-205ENST00000558248 UBQLN4Q9NRR5 601 aa3.08□□□□□ -1.92
LRRC28-205ENST00000558248 CISHQ9NSE2 258 aa3.08□□□□□ -1.92
LRRC28-205ENST00000558248 OR52A1Q9UKL2 312 aa3.08□□□□□ -1.92
LRRC28-205ENST00000558248 HCFC1P51610 2035 aa3.08□□□□□ -1.92
LRRC28-205ENST00000558248 CHD3Q12873 2000 aaKnown RBP3.08□□□□□ -1.92
LRRC28-205ENST00000558248 SPTBP11277 2137 aa3.08□□□□□ -1.92
LRRC28-205ENST00000558248 SEC16AO15027 2179 aa3.08□□□□□ -1.92
LRRC28-205ENST00000558248 TLN2Q9Y4G6 2542 aa3.08□□□□□ -1.92
LRRC28-205ENST00000558248 PQLC2LA1A4F0 135 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 NKX2-6A6NCS4 301 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 GPR31O00270 319 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 KPNA4O00629 521 aaPredicted RBP3.07□□□□□ -1.92
LRRC28-205ENST00000558248 BHLHE40O14503 412 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 GALR3O60755 368 aaPredicted RBP3.07□□□□□ -1.92
LRRC28-205ENST00000558248 PFDN1O60925 122 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 NPIPB7O75200 414 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 CA11O75493 328 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 KLF7O75840 302 aaPredicted RBP3.07□□□□□ -1.92
LRRC28-205ENST00000558248 ATG12O94817 140 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 YIF1AO95070 293 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 S1PR2O95136 353 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 EPPINO95925 133 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 TTRP02766 147 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 CRYGDP07320 174 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 OR4A8P0C604 315 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 FAM228BP0C875 321 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 SULT1A3P0DMM9 295 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 SULT1A4P0DMN0 295 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 C1GALT1C1LP0DN25 315 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 GABRA1P14867 456 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 ELK4P28324 431 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 TALDO1P37837 337 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 REG1BP48304 166 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 NCBP2P52298 156 aaKnown RBP eCLIP3.07□□□□□ -1.92
LRRC28-205ENST00000558248 ZNF138P52744 262 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 H2BFSP57053 126 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 DAD1P61803 113 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 SNRPFP62306 86 aaKnown RBP3.07□□□□□ -1.92
LRRC28-205ENST00000558248 RBX1P62877 108 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 EBPQ15125 230 aaKnown RBP3.07□□□□□ -1.92
LRRC28-205ENST00000558248 GSG1Q2KHT4 349 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 LRRC10Q5BKY1 277 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 ZNF684Q5T5D7 378 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 FAM78BQ5VT40 261 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 RSBN1Q5VWQ0 802 aaPredicted RBP3.07□□□□□ -1.92
LRRC28-205ENST00000558248 OPN5Q6U736 354 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 REG3GQ6UW15 175 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 NEGR1Q7Z3B1 354 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 GRINAQ7Z429 371 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 C1orf158Q8N1D5 194 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 SMIM20Q8N5G0 67 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 GPR26Q8NDV2 337 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 OR10G9Q8NGN4 311 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 OR2K2Q8NGT1 345 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 OR13D1Q8NGV5 346 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 LZICQ8WZA0 190 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 ACY3Q96HD9 319 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 TSC22D3Q99576 134 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 SFXN3Q9BWM7 321 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 PLA2G12AQ9BZM1 189 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 SLC25A31Q9H0C2 315 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 ALX4Q9H161 411 aaPredicted RBP3.07□□□□□ -1.92
LRRC28-205ENST00000558248 OR51I2Q9H344 312 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 EDA2RQ9HAV5 297 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 ZNF835Q9Y2P0 537 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 UTP11Q9Y3A2 253 aaKnown RBP3.07□□□□□ -1.92
LRRC28-205ENST00000558248 YTHDF2Q9Y5A9 579 aaKnown RBP3.07□□□□□ -1.92
LRRC28-205ENST00000558248 WSB1Q9Y6I7 421 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 TMEM56-RWDD3S4R434 201 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 TGP01266 2768 aa3.07□□□□□ -1.92
LRRC28-205ENST00000558248 SONP18583 2426 aaKnown RBP3.07□□□□□ -1.92
LRRC28-205ENST00000558248 NOTCH1P46531 2555 aa3.06□□□□□ -1.92
LRRC28-205ENST00000558248 IGHV5-51A0A0C4DH38 117 aa3.06□□□□□ -1.92
LRRC28-205ENST00000558248 A0A0J9YXV3 536 aa3.06□□□□□ -1.92
LRRC28-205ENST00000558248 A0A1B0GV50 99 aa3.06□□□□□ -1.92
LRRC28-205ENST00000558248 RPL37AP8A6NKH3 93 aa3.06□□□□□ -1.92
LRRC28-205ENST00000558248 FAM159BA6NKW6 160 aa3.06□□□□□ -1.92
LRRC28-205ENST00000558248 FAM183AA6NL82 134 aa3.06□□□□□ -1.92
LRRC28-205ENST00000558248 K7EPK0 472 aa3.06□□□□□ -1.92
LRRC28-205ENST00000558248 SAP18O00422 153 aaKnown RBP3.06□□□□□ -1.92
LRRC28-205ENST00000558248 ARPC5O15511 151 aa3.06□□□□□ -1.92
LRRC28-205ENST00000558248 ORC5O43913 435 aa3.06□□□□□ -1.92
LRRC28-205ENST00000558248 MED6O75586 246 aa3.06□□□□□ -1.92
LRRC28-205ENST00000558248 KBTBD11O94819 623 aa3.06□□□□□ -1.92
LRRC28-205ENST00000558248 DUSP14O95147 198 aaKnown RBP3.06□□□□□ -1.92
LRRC28-205ENST00000558248 IGHV3-48P01763 117 aa3.06□□□□□ -1.92
LRRC28-205ENST00000558248 SERPINA7P05543 415 aa3.06□□□□□ -1.92
LRRC28-205ENST00000558248 CECR9P0C854 216 aa3.06□□□□□ -1.92
LRRC28-205ENST00000558248 PRSS3P35030 304 aa3.06□□□□□ -1.92
LRRC28-205ENST00000558248 BTCP35070 178 aa3.06□□□□□ -1.92
LRRC28-205ENST00000558248 APLNRP35414 380 aa3.06□□□□□ -1.92
LRRC28-205ENST00000558248 CTRLP40313 264 aa3.06□□□□□ -1.92
LRRC28-205ENST00000558248 UBE2NP61088 152 aaKnown RBP3.06□□□□□ -1.92
LRRC28-205ENST00000558248 AP1S1P61966 158 aa3.06□□□□□ -1.92
LRRC28-205ENST00000558248 PPP1CAP62136 330 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms