RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 C13orf42A0A1B0GVH6 325 aa7.8□□□□□ -1.16
USP3-207ENST00000558218 SMIM30A4D0T7 59 aa7.8□□□□□ -1.16
USP3-207ENST00000558218 TMEM235A6NFC5 223 aa7.8□□□□□ -1.16
USP3-207ENST00000558218 SSX5O60225 188 aa7.8□□□□□ -1.16
USP3-207ENST00000558218 TUSC2O75896 110 aa7.8□□□□□ -1.16
USP3-207ENST00000558218 ECI1P42126 302 aa7.8□□□□□ -1.16
USP3-207ENST00000558218 CBX5P45973 191 aa7.8□□□□□ -1.16
USP3-207ENST00000558218 SSBP2P81877 361 aaPredicted RBP7.8□□□□□ -1.16
USP3-207ENST00000558218 MXD1Q05195 221 aa7.8□□□□□ -1.16
USP3-207ENST00000558218 NEDD8Q15843 81 aa7.8□□□□□ -1.16
USP3-207ENST00000558218 PRSS8Q16651 343 aa7.8□□□□□ -1.16
USP3-207ENST00000558218 FAM209BQ5JX69 171 aa7.8□□□□□ -1.16
USP3-207ENST00000558218 ACSM6Q6P461 480 aa7.8□□□□□ -1.16
USP3-207ENST00000558218 ZNF66Q6ZN08 573 aa7.8□□□□□ -1.16
USP3-207ENST00000558218 HOGA1Q86XE5 327 aa7.8□□□□□ -1.16
USP3-207ENST00000558218 ZBTB34Q8NCN2 500 aa7.8□□□□□ -1.16
USP3-207ENST00000558218 VSTM2AQ8TAG5 236 aa7.8□□□□□ -1.16
USP3-207ENST00000558218 DLX4Q92988 240 aaPredicted RBP7.8□□□□□ -1.16
USP3-207ENST00000558218 S100A16Q96FQ6 103 aaKnown RBP7.8□□□□□ -1.16
USP3-207ENST00000558218 C5orf30Q96GV9 206 aa7.8□□□□□ -1.16
USP3-207ENST00000558218 MS4A10Q96PG2 267 aa7.8□□□□□ -1.16
USP3-207ENST00000558218 OR5B12Q96R08 314 aa7.8□□□□□ -1.16
USP3-207ENST00000558218 ZNF355PQ9NSJ1 428 aa7.8□□□□□ -1.16
USP3-207ENST00000558218 ELF5Q9UKW6 265 aaPredicted RBP7.8□□□□□ -1.16
USP3-207ENST00000558218 TNCP24821 2201 aa7.8□□□□□ -1.16
USP3-207ENST00000558218 MSGN1A6NI15 193 aa7.79□□□□□ -1.16
USP3-207ENST00000558218 LINC00473A8K010 186 aa7.79□□□□□ -1.16
USP3-207ENST00000558218 ACTL6BO94805 426 aa7.79□□□□□ -1.16
USP3-207ENST00000558218 CRYZL1O95825 349 aa7.79□□□□□ -1.16
USP3-207ENST00000558218 IGLV2-14P01704 120 aa7.79□□□□□ -1.16
USP3-207ENST00000558218 NFYAP23511 347 aaPredicted RBP7.79□□□□□ -1.16
USP3-207ENST00000558218 MAS1LP35410 378 aa7.79□□□□□ -1.16
USP3-207ENST00000558218 PJVKQ0ZLH3 352 aa7.79□□□□□ -1.16
USP3-207ENST00000558218 CDK10Q15131 360 aa7.79□□□□□ -1.16
USP3-207ENST00000558218 MRGPRG-AS1Q2M3A8 158 aa7.79□□□□□ -1.16
USP3-207ENST00000558218 MMD2Q8IY49 270 aa7.79□□□□□ -1.16
USP3-207ENST00000558218 BEST4Q8NFU0 473 aa7.79□□□□□ -1.16
USP3-207ENST00000558218 TSPAN14Q8NG11 270 aa7.79□□□□□ -1.16
USP3-207ENST00000558218 OR5T1Q8NG75 326 aa7.79□□□□□ -1.16
USP3-207ENST00000558218 OR6Q1Q8NGQ2 317 aa7.79□□□□□ -1.16
USP3-207ENST00000558218 GRPEL2Q8TAA5 225 aa7.79□□□□□ -1.16
USP3-207ENST00000558218 NUDCD2Q8WVJ2 157 aa7.79□□□□□ -1.16
USP3-207ENST00000558218 BORCS5Q969J3 196 aa7.79□□□□□ -1.16
USP3-207ENST00000558218 OR4C12Q96R67 309 aa7.79□□□□□ -1.16
USP3-207ENST00000558218 SPIN2AQ99865 258 aa7.79□□□□□ -1.16
USP3-207ENST00000558218 SPIN2BQ9BPZ2 258 aa7.79□□□□□ -1.16
USP3-207ENST00000558218 ELOVL1Q9BW60 279 aa7.79□□□□□ -1.16
USP3-207ENST00000558218 TINAGL1Q9GZM7 467 aaPredicted RBP7.79□□□□□ -1.16
USP3-207ENST00000558218 AUNIPQ9H7T9 357 aa7.79□□□□□ -1.16
USP3-207ENST00000558218 IGHV4OR15-8A0A075B7B6 117 aa7.78□□□□□ -1.16
USP3-207ENST00000558218 A0A087WW49 117 aa7.78□□□□□ -1.16
USP3-207ENST00000558218 XRCC3O43542 346 aa7.78□□□□□ -1.16
USP3-207ENST00000558218 AIREO43918 545 aa7.78□□□□□ -1.16
USP3-207ENST00000558218 FCGR3BO75015 233 aa7.78□□□□□ -1.16
USP3-207ENST00000558218 TNFAIP8O95379 198 aa7.78□□□□□ -1.16
USP3-207ENST00000558218 HRASP01112 189 aa7.78□□□□□ -1.16
USP3-207ENST00000558218 CLEC2LP0C7M8 214 aa7.78□□□□□ -1.16
USP3-207ENST00000558218 KIR2DS2P43631 304 aa7.78□□□□□ -1.16
USP3-207ENST00000558218 ARPC4P59998 168 aa7.78□□□□□ -1.16
USP3-207ENST00000558218 EIF4EBP1Q13541 118 aaPredicted RBP7.78□□□□□ -1.16
USP3-207ENST00000558218 TATDN3Q17R31 274 aa7.78□□□□□ -1.16
USP3-207ENST00000558218 ZNF343Q6P1L6 599 aa7.78□□□□□ -1.16
USP3-207ENST00000558218 KCTD9Q7L273 389 aa7.78□□□□□ -1.16
USP3-207ENST00000558218 SLC25A42Q86VD7 318 aa7.78□□□□□ -1.16
USP3-207ENST00000558218 MFSD4AQ8N468 514 aa7.78□□□□□ -1.16
USP3-207ENST00000558218 TTC9CQ8N5M4 171 aa7.78□□□□□ -1.16
USP3-207ENST00000558218 OR5H6Q8NGV6 325 aa7.78□□□□□ -1.16
USP3-207ENST00000558218 OR4S2Q8NH73 311 aa7.78□□□□□ -1.16
USP3-207ENST00000558218 GIMAP1Q8WWP7 306 aa7.78□□□□□ -1.16
USP3-207ENST00000558218 SRSF12Q8WXF0 261 aaKnown RBP7.78□□□□□ -1.16
USP3-207ENST00000558218 SLC25A38Q96DW6 304 aa7.78□□□□□ -1.16
USP3-207ENST00000558218 CMTM3Q96MX0 182 aa7.78□□□□□ -1.16
USP3-207ENST00000558218 DCUN1D5Q9BTE7 237 aa7.78□□□□□ -1.16
USP3-207ENST00000558218 ALX4Q9H161 411 aaPredicted RBP7.78□□□□□ -1.16
USP3-207ENST00000558218 RNF167Q9H6Y7 350 aa7.78□□□□□ -1.16
USP3-207ENST00000558218 FAM223BA6NKX1 122 aa7.77□□□□□ -1.17
USP3-207ENST00000558218 RBFOX2O43251 390 aaKnown RBP eCLIP7.77□□□□□ -1.17
USP3-207ENST00000558218 SAP30O75446 220 aa7.77□□□□□ -1.17
USP3-207ENST00000558218 OR2A4O95047 310 aa7.77□□□□□ -1.17
USP3-207ENST00000558218 IGHV3-11P01762 117 aa7.77□□□□□ -1.17
USP3-207ENST00000558218 FGF2P09038 288 aa7.77□□□□□ -1.17
USP3-207ENST00000558218 OR9G9P0C7N8 305 aa7.77□□□□□ -1.17
USP3-207ENST00000558218 FCGR2CP31995 323 aa7.77□□□□□ -1.17
USP3-207ENST00000558218 SLURP1P55000 103 aa7.77□□□□□ -1.17
USP3-207ENST00000558218 KLF5Q13887 457 aaPredicted RBP7.77□□□□□ -1.17
USP3-207ENST00000558218 DHRS11Q6UWP2 260 aa7.77□□□□□ -1.17
USP3-207ENST00000558218 FAM223AQ8IWN6 122 aa7.77□□□□□ -1.17
USP3-207ENST00000558218 ADAD2Q8NCV1 583 aaKnown RBP7.77□□□□□ -1.17
USP3-207ENST00000558218 OR5AP2Q8NGF4 316 aa7.77□□□□□ -1.17
USP3-207ENST00000558218 OR4A5Q8NH83 315 aa7.77□□□□□ -1.17
USP3-207ENST00000558218 CD300LFQ8TDQ1 290 aa7.77□□□□□ -1.17
USP3-207ENST00000558218 CASTOR1Q8WTX7 329 aa7.77□□□□□ -1.17
USP3-207ENST00000558218 SNAPC3Q92966 411 aa7.77□□□□□ -1.17
USP3-207ENST00000558218 YIPF6Q96EC8 236 aa7.77□□□□□ -1.17
USP3-207ENST00000558218 OR2A7Q96R45 310 aa7.77□□□□□ -1.17
USP3-207ENST00000558218 PHB2Q99623 299 aa7.77□□□□□ -1.17
USP3-207ENST00000558218 KRTAP9-9Q9BYP9 154 aa7.77□□□□□ -1.17
USP3-207ENST00000558218 KRTAP9-4Q9BYQ2 154 aa7.77□□□□□ -1.17
USP3-207ENST00000558218 SIGLEC8Q9NYZ4 499 aa7.77□□□□□ -1.17
USP3-207ENST00000558218 PEF1Q9UBV8 284 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms