RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 NDUFA7O95182 113 aa16.89■□□□□ 0.29
CASC4-204ENST00000557945 SERPINE2P07093 398 aa16.89■□□□□ 0.29
CASC4-204ENST00000557945 SP6Q3SY56 376 aa16.89■□□□□ 0.29
CASC4-204ENST00000557945 ZNF585BQ52M93 769 aa16.89■□□□□ 0.29
CASC4-204ENST00000557945 LIN54Q6MZP7 749 aa16.89■□□□□ 0.29
CASC4-204ENST00000557945 Q6ZS46 218 aa16.89■□□□□ 0.29
CASC4-204ENST00000557945 SGPP2Q8IWX5 399 aa16.89■□□□□ 0.29
CASC4-204ENST00000557945 VKORC1L1Q8N0U8 176 aa16.89■□□□□ 0.29
CASC4-204ENST00000557945 TMEM230Q96A57 120 aa16.89■□□□□ 0.29
CASC4-204ENST00000557945 TP53RKQ96S44 253 aa16.89■□□□□ 0.29
CASC4-204ENST00000557945 CLCC1Q96S66 551 aa16.89■□□□□ 0.29
CASC4-204ENST00000557945 PLEKHA2Q9HB19 425 aa16.89■□□□□ 0.29
CASC4-204ENST00000557945 FLVCR2Q9UPI3 526 aa16.89■□□□□ 0.29
CASC4-204ENST00000557945 TSPAN9O75954 239 aa16.88■□□□□ 0.29
CASC4-204ENST00000557945 SLC6A1P30531 599 aa16.88■□□□□ 0.29
CASC4-204ENST00000557945 UBE2KP61086 200 aa16.88■□□□□ 0.29
CASC4-204ENST00000557945 TRIM16LQ309B1 348 aa16.88■□□□□ 0.29
CASC4-204ENST00000557945 SSX9Q7RTT3 188 aa16.88■□□□□ 0.29
CASC4-204ENST00000557945 CENPSQ8N2Z9 138 aa16.88■□□□□ 0.29
CASC4-204ENST00000557945 OR4F5Q8NH21 305 aa16.88■□□□□ 0.29
CASC4-204ENST00000557945 OR2T6Q8NHC8 308 aa16.88■□□□□ 0.29
CASC4-204ENST00000557945 AIFM2Q9BRQ8 373 aa16.88■□□□□ 0.29
CASC4-204ENST00000557945 C19orf24Q9BVV8 132 aa16.88■□□□□ 0.29
CASC4-204ENST00000557945 SIGLEC9Q9Y336 463 aa16.88■□□□□ 0.29
CASC4-204ENST00000557945 ARPC1BO15143 372 aaKnown RBP16.87■□□□□ 0.29
CASC4-204ENST00000557945 OR5AC1P0C628 307 aa16.87■□□□□ 0.29
CASC4-204ENST00000557945 SAA1P0DJI8 122 aaPredicted RBP16.87■□□□□ 0.29
CASC4-204ENST00000557945 RPA2P15927 270 aa16.87■□□□□ 0.29
CASC4-204ENST00000557945 NQO2P16083 231 aa16.87■□□□□ 0.29
CASC4-204ENST00000557945 TAS2R31P59538 309 aa16.87■□□□□ 0.29
CASC4-204ENST00000557945 ERVK-16P61578 105 aa16.87■□□□□ 0.29
CASC4-204ENST00000557945 ENKURQ8TC29 256 aa16.87■□□□□ 0.29
CASC4-204ENST00000557945 RHOVQ96L33 236 aa16.87■□□□□ 0.29
CASC4-204ENST00000557945 TPSG1Q9NRR2 321 aa16.87■□□□□ 0.29
CASC4-204ENST00000557945 FAM212BQ9NTI7 297 aaPredicted RBP16.87■□□□□ 0.29
CASC4-204ENST00000557945 COMMD9Q9P000 198 aa16.87■□□□□ 0.29
CASC4-204ENST00000557945 KCNIP3Q9Y2W7 256 aa16.87■□□□□ 0.29
CASC4-204ENST00000557945 B3GALNT1O75752 331 aa16.86■□□□□ 0.29
CASC4-204ENST00000557945 TCRBP04435 133 aa16.86■□□□□ 0.29
CASC4-204ENST00000557945 TEX45Q8NA69 505 aa16.86■□□□□ 0.29
CASC4-204ENST00000557945 DMBX1Q8NFW5 382 aa16.86■□□□□ 0.29
CASC4-204ENST00000557945 R3HDM4Q96D70 268 aa16.86■□□□□ 0.29
CASC4-204ENST00000557945 FCN1O00602 326 aa16.85■□□□□ 0.29
CASC4-204ENST00000557945 KRASP01116 189 aa16.85■□□□□ 0.29
CASC4-204ENST00000557945 CRYGBP07316 175 aa16.85■□□□□ 0.29
CASC4-204ENST00000557945 TMEM128Q5BJH2 165 aa16.85■□□□□ 0.29
CASC4-204ENST00000557945 SLC35E3Q7Z769 313 aa16.85■□□□□ 0.29
CASC4-204ENST00000557945 SLC25A42Q86VD7 318 aa16.85■□□□□ 0.29
CASC4-204ENST00000557945 Q8N2B8 174 aa16.85■□□□□ 0.29
CASC4-204ENST00000557945 VSTM2AQ8TAG5 236 aa16.85■□□□□ 0.29
CASC4-204ENST00000557945 HSPB9Q9BQS6 159 aa16.85■□□□□ 0.29
CASC4-204ENST00000557945 C20orf85Q9H1P6 137 aa16.85■□□□□ 0.29
CASC4-204ENST00000557945 C16orf95Q9H693 158 aa16.85■□□□□ 0.29
CASC4-204ENST00000557945 BEX1Q9HBH7 125 aa16.85■□□□□ 0.29
CASC4-204ENST00000557945 TRAV6A0A075B6T7 132 aa16.84■□□□□ 0.29
CASC4-204ENST00000557945 OR2A4O95047 310 aa16.84■□□□□ 0.29
CASC4-204ENST00000557945 HLA-DRB1P01911 266 aa16.84■□□□□ 0.29
CASC4-204ENST00000557945 ANXA3P12429 323 aa16.84■□□□□ 0.29
CASC4-204ENST00000557945 MDKP21741 143 aaPredicted RBP16.84■□□□□ 0.29
CASC4-204ENST00000557945 VAMP1P23763 118 aa16.84■□□□□ 0.29
CASC4-204ENST00000557945 G6PCP35575 357 aa16.84■□□□□ 0.29
CASC4-204ENST00000557945 VDAC2P45880 294 aaPredicted RBP16.84■□□□□ 0.29
CASC4-204ENST00000557945 GNB1P62873 340 aa16.84■□□□□ 0.29
CASC4-204ENST00000557945 DHODHQ02127 395 aa16.84■□□□□ 0.29
CASC4-204ENST00000557945 FOXL1Q12952 345 aa16.84■□□□□ 0.29
CASC4-204ENST00000557945 TMEM95Q3KNT9 176 aa16.84■□□□□ 0.29
CASC4-204ENST00000557945 PPP1R27Q86WC6 154 aa16.84■□□□□ 0.29
CASC4-204ENST00000557945 LINC01006Q8NI28 216 aa16.84■□□□□ 0.29
CASC4-204ENST00000557945 OR2A7Q96R45 310 aa16.84■□□□□ 0.29
CASC4-204ENST00000557945 TMEM89A2RUT3 159 aa16.83■□□□□ 0.28
CASC4-204ENST00000557945 MARCH11A6NNE9 402 aa16.83■□□□□ 0.28
CASC4-204ENST00000557945 CA2P00918 260 aa16.83■□□□□ 0.28
CASC4-204ENST00000557945 ANXA7P20073 488 aaKnown RBP16.83■□□□□ 0.28
CASC4-204ENST00000557945 UCP1P25874 307 aa16.83■□□□□ 0.28
CASC4-204ENST00000557945 SUPT4H1P63272 117 aaKnown RBP16.83■□□□□ 0.28
CASC4-204ENST00000557945 PJVKQ0ZLH3 352 aa16.83■□□□□ 0.28
CASC4-204ENST00000557945 OR4A47Q6IF82 309 aa16.83■□□□□ 0.28
CASC4-204ENST00000557945 PUSL1Q8N0Z8 303 aaKnown RBP16.83■□□□□ 0.28
CASC4-204ENST00000557945 GLYATL2Q8WU03 294 aa16.83■□□□□ 0.28
CASC4-204ENST00000557945 GALNT14Q96FL9 552 aa16.83■□□□□ 0.28
CASC4-204ENST00000557945 TMEM222Q9H0R3 208 aa16.83■□□□□ 0.28
CASC4-204ENST00000557945 TMEM140Q9NV12 185 aa16.83■□□□□ 0.28
CASC4-204ENST00000557945 NUDT15Q9NV35 164 aa16.83■□□□□ 0.28
CASC4-204ENST00000557945 IGHV7-81A0A0B4J1V7 117 aa16.82■□□□□ 0.28
CASC4-204ENST00000557945 LINC01548A6NM66 108 aa16.82■□□□□ 0.28
CASC4-204ENST00000557945 KCNAB3O43448 404 aa16.82■□□□□ 0.28
CASC4-204ENST00000557945 KBTBD11O94819 623 aa16.82■□□□□ 0.28
CASC4-204ENST00000557945 IGKV1-39P01597 117 aa16.82■□□□□ 0.28
CASC4-204ENST00000557945 IGHG2P01859 326 aa16.82■□□□□ 0.28
CASC4-204ENST00000557945 IGKV1D-39P04432 117 aa16.82■□□□□ 0.28
CASC4-204ENST00000557945 CX3CL1P78423 397 aa16.82■□□□□ 0.28
CASC4-204ENST00000557945 PPP1R1AQ13522 171 aa16.82■□□□□ 0.28
CASC4-204ENST00000557945 POU2AF1Q16633 256 aa16.82■□□□□ 0.28
CASC4-204ENST00000557945 PRSS8Q16651 343 aa16.82■□□□□ 0.28
CASC4-204ENST00000557945 NRARPQ7Z6K4 114 aa16.82■□□□□ 0.28
CASC4-204ENST00000557945 ABHD5Q8WTS1 349 aa16.82■□□□□ 0.28
CASC4-204ENST00000557945 PRR13Q9NZ81 148 aa16.82■□□□□ 0.28
CASC4-204ENST00000557945 CLPSL1A2RUU4 121 aa16.81■□□□□ 0.28
CASC4-204ENST00000557945 CREBL2O60519 120 aaPredicted RBP16.81■□□□□ 0.28
CASC4-204ENST00000557945 CNIH1O95406 144 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms