RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 SPP1P10451 314 aa6.57□□□□□ -1.36
NEDD1-211ENST00000557454 COX4I1P13073 169 aa6.57□□□□□ -1.36
NEDD1-211ENST00000557454 OSMP13725 252 aa6.57□□□□□ -1.36
NEDD1-211ENST00000557454 TTC32Q5I0X7 151 aa6.57□□□□□ -1.36
NEDD1-211ENST00000557454 OR2T5Q6IEZ7 315 aa6.57□□□□□ -1.36
NEDD1-211ENST00000557454 PLET1Q6UQ28 207 aa6.57□□□□□ -1.36
NEDD1-211ENST00000557454 TRPT1Q86TN4 253 aaKnown RBP6.57□□□□□ -1.36
NEDD1-211ENST00000557454 OR10H4Q8NGA5 316 aa6.57□□□□□ -1.36
NEDD1-211ENST00000557454 OR2T29Q8NH02 315 aa6.57□□□□□ -1.36
NEDD1-211ENST00000557454 GIPC3Q8TF64 312 aa6.57□□□□□ -1.36
NEDD1-211ENST00000557454 GIMAP1Q8WWP7 306 aa6.57□□□□□ -1.36
NEDD1-211ENST00000557454 TEX12Q9BXU0 123 aa6.57□□□□□ -1.36
NEDD1-211ENST00000557454 AP5S1Q9NUS5 200 aa6.57□□□□□ -1.36
NEDD1-211ENST00000557454 LINC00588Q9Y4M8 146 aa6.57□□□□□ -1.36
NEDD1-211ENST00000557454 TRBV7-1A0A0A6YYK4 115 aa6.56□□□□□ -1.36
NEDD1-211ENST00000557454 NPIPB5A8MRT5 1133 aa6.56□□□□□ -1.36
NEDD1-211ENST00000557454 TEX22C9J3V5 150 aa6.56□□□□□ -1.36
NEDD1-211ENST00000557454 M0R1X1 148 aa6.56□□□□□ -1.36
NEDD1-211ENST00000557454 EDF1O60869 148 aaKnown RBP6.56□□□□□ -1.36
NEDD1-211ENST00000557454 ACTL6BO94805 426 aa6.56□□□□□ -1.36
NEDD1-211ENST00000557454 GTF2F2P13984 249 aa6.56□□□□□ -1.36
NEDD1-211ENST00000557454 RAB3AP20336 220 aa6.56□□□□□ -1.36
NEDD1-211ENST00000557454 CAPGP40121 348 aa6.56□□□□□ -1.36
NEDD1-211ENST00000557454 UBE2KP61086 200 aa6.56□□□□□ -1.36
NEDD1-211ENST00000557454 VMA21Q3ZAQ7 101 aa6.56□□□□□ -1.36
NEDD1-211ENST00000557454 HACD2Q6Y1H2 254 aa6.56□□□□□ -1.36
NEDD1-211ENST00000557454 FAM24BQ8N5W8 94 aa6.56□□□□□ -1.36
NEDD1-211ENST00000557454 PARP16Q8N5Y8 322 aa6.56□□□□□ -1.36
NEDD1-211ENST00000557454 OR2A7Q96R45 310 aa6.56□□□□□ -1.36
NEDD1-211ENST00000557454 C11orf54Q9H0W9 315 aaPredicted RBP6.56□□□□□ -1.36
NEDD1-211ENST00000557454 ZNF430Q9H8G1 570 aaPredicted RBP6.56□□□□□ -1.36
NEDD1-211ENST00000557454 ISG20L2Q9H9L3 353 aaKnown RBP6.56□□□□□ -1.36
NEDD1-211ENST00000557454 ABRACLQ9P1F3 81 aa6.56□□□□□ -1.36
NEDD1-211ENST00000557454 AASSQ9UDR5 926 aa6.56□□□□□ -1.36
NEDD1-211ENST00000557454 IGHV3-49A0A0A0MS15 119 aa6.55□□□□□ -1.36
NEDD1-211ENST00000557454 DPPA5A6NC42 116 aa6.55□□□□□ -1.36
NEDD1-211ENST00000557454 BAG2O95816 211 aa6.55□□□□□ -1.36
NEDD1-211ENST00000557454 OR2T7P0C7T2 308 aa6.55□□□□□ -1.36
NEDD1-211ENST00000557454 PTGES3Q15185 160 aaKnown RBP6.55□□□□□ -1.36
NEDD1-211ENST00000557454 FAM98BQ52LJ0 330 aaKnown RBP6.55□□□□□ -1.36
NEDD1-211ENST00000557454 AADACL4Q5VUY2 407 aa6.55□□□□□ -1.36
NEDD1-211ENST00000557454 WDR93Q6P2C0 686 aa6.55□□□□□ -1.36
NEDD1-211ENST00000557454 TEX45Q8NA69 505 aa6.55□□□□□ -1.36
NEDD1-211ENST00000557454 ZNF502Q8TBZ5 544 aa6.55□□□□□ -1.36
NEDD1-211ENST00000557454 ANP32BQ92688 251 aaKnown RBP6.55□□□□□ -1.36
NEDD1-211ENST00000557454 S100A13Q99584 98 aa6.55□□□□□ -1.36
NEDD1-211ENST00000557454 NIPSNAP3BQ9BS92 247 aa6.55□□□□□ -1.36
NEDD1-211ENST00000557454 Q9H3A6 140 aa6.55□□□□□ -1.36
NEDD1-211ENST00000557454 Q9H8V8 135 aa6.55□□□□□ -1.36
NEDD1-211ENST00000557454 EFCAB1Q9HAE3 211 aa6.55□□□□□ -1.36
NEDD1-211ENST00000557454 TMBIM4Q9HC24 238 aa6.55□□□□□ -1.36
NEDD1-211ENST00000557454 H2AFY2Q9P0M6 372 aaPredicted RBP6.55□□□□□ -1.36
NEDD1-211ENST00000557454 OR1A1Q9P1Q5 309 aa6.55□□□□□ -1.36
NEDD1-211ENST00000557454 GMPPBQ9Y5P6 360 aa6.55□□□□□ -1.36
NEDD1-211ENST00000557454 OR4C45A6NMZ5 311 aa6.54□□□□□ -1.36
NEDD1-211ENST00000557454 ITGB1BP1O14713 200 aa6.54□□□□□ -1.36
NEDD1-211ENST00000557454 CHEK1O14757 476 aa6.54□□□□□ -1.36
NEDD1-211ENST00000557454 HTR1AP08908 422 aa6.54□□□□□ -1.36
NEDD1-211ENST00000557454 AREGP15514 252 aa6.54□□□□□ -1.36
NEDD1-211ENST00000557454 CCL18P55774 89 aa6.54□□□□□ -1.36
NEDD1-211ENST00000557454 ERVFC1-1P60608 527 aa6.54□□□□□ -1.36
NEDD1-211ENST00000557454 ZNF85Q03923 595 aa6.54□□□□□ -1.36
NEDD1-211ENST00000557454 FAM222AQ5U5X8 452 aa6.54□□□□□ -1.36
NEDD1-211ENST00000557454 NXNL2Q5VZ03 156 aa6.54□□□□□ -1.36
NEDD1-211ENST00000557454 Q6ZRN7 208 aaPredicted RBP6.54□□□□□ -1.36
NEDD1-211ENST00000557454 CXorf58Q96LI9 332 aa6.54□□□□□ -1.36
NEDD1-211ENST00000557454 FYTTD1Q96QD9 318 aaKnown RBP6.54□□□□□ -1.36
NEDD1-211ENST00000557454 OR14A2Q96R54 314 aa6.54□□□□□ -1.36
NEDD1-211ENST00000557454 RHPN1-AS1Q9BWJ2 59 aa6.54□□□□□ -1.36
NEDD1-211ENST00000557454 JAM3Q9BX67 310 aa6.54□□□□□ -1.36
NEDD1-211ENST00000557454 ARL8BQ9NVJ2 186 aa6.54□□□□□ -1.36
NEDD1-211ENST00000557454 PAK1IP1Q9NWT1 392 aaPredicted RBP6.54□□□□□ -1.36
NEDD1-211ENST00000557454 SMPD3Q9NY59 655 aaPredicted RBP6.54□□□□□ -1.36
NEDD1-211ENST00000557454 TAS2R4Q9NYW5 299 aa6.54□□□□□ -1.36
NEDD1-211ENST00000557454 PRR13Q9NZ81 148 aa6.54□□□□□ -1.36
NEDD1-211ENST00000557454 DKK2Q9UBU2 259 aa6.54□□□□□ -1.36
NEDD1-211ENST00000557454 SMPXQ9UHP9 88 aa6.54□□□□□ -1.36
NEDD1-211ENST00000557454 LRRC42Q9Y546 428 aa6.54□□□□□ -1.36
NEDD1-211ENST00000557454 IGLV11-55A0A075B6I3 123 aa6.53□□□□□ -1.36
NEDD1-211ENST00000557454 A0A1W2PPQ1 181 aa6.53□□□□□ -1.36
NEDD1-211ENST00000557454 RPS10-NUDT3A0A1W2PQS6 291 aa6.53□□□□□ -1.36
NEDD1-211ENST00000557454 OR2T8A6NH00 312 aa6.53□□□□□ -1.36
NEDD1-211ENST00000557454 KNCNA6PVL3 124 aa6.53□□□□□ -1.36
NEDD1-211ENST00000557454 ZNF780AO75290 641 aaPredicted RBP6.53□□□□□ -1.36
NEDD1-211ENST00000557454 DFFBO76075 338 aa6.53□□□□□ -1.36
NEDD1-211ENST00000557454 NUDT3O95989 172 aa6.53□□□□□ -1.36
NEDD1-211ENST00000557454 REG1AP05451 166 aa6.53□□□□□ -1.36
NEDD1-211ENST00000557454 DNAH10OSP0CZ25 163 aa6.53□□□□□ -1.36
NEDD1-211ENST00000557454 SAA1P0DJI8 122 aaPredicted RBP6.53□□□□□ -1.36
NEDD1-211ENST00000557454 GCSHP23434 173 aa6.53□□□□□ -1.36
NEDD1-211ENST00000557454 MAS1LP35410 378 aa6.53□□□□□ -1.36
NEDD1-211ENST00000557454 CCR9P51686 369 aa6.53□□□□□ -1.36
NEDD1-211ENST00000557454 LINC00315P59091 139 aa6.53□□□□□ -1.36
NEDD1-211ENST00000557454 CBX3Q13185 183 aa6.53□□□□□ -1.36
NEDD1-211ENST00000557454 USF2Q15853 346 aaPredicted RBP6.53□□□□□ -1.36
NEDD1-211ENST00000557454 SIGIRRQ6IA17 410 aa6.53□□□□□ -1.36
NEDD1-211ENST00000557454 HS3ST5Q8IZT8 346 aa6.53□□□□□ -1.36
NEDD1-211ENST00000557454 ELAC2Q9BQ52 826 aaKnown RBP6.53□□□□□ -1.36
NEDD1-211ENST00000557454 IGHV3OR16-13A0A075B7E8 117 aa6.52□□□□□ -1.37
NEDD1-211ENST00000557454 IGHV3-74A0A0B4J1X5 117 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms