RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 NEU1Q99519 415 aa9.49□□□□□ -0.89
SRP54-213ENST00000556994 HCFC1P51610 2035 aa9.49□□□□□ -0.89
SRP54-213ENST00000556994 SCO2A0A1W2PP80 73 aa9.49□□□□□ -0.89
SRP54-213ENST00000556994 ZNF705FA8MVS1 300 aaPredicted RBP9.49□□□□□ -0.89
SRP54-213ENST00000556994 C9orf172C9J069 976 aa9.49□□□□□ -0.89
SRP54-213ENST00000556994 PDE6DO43924 150 aa9.49□□□□□ -0.89
SRP54-213ENST00000556994 ZNF705DP0CH99 300 aaPredicted RBP9.49□□□□□ -0.89
SRP54-213ENST00000556994 ZNF705BP0CI00 300 aaPredicted RBP9.49□□□□□ -0.89
SRP54-213ENST00000556994 R3HDM4Q96D70 268 aa9.49□□□□□ -0.89
SRP54-213ENST00000556994 ELOVL5Q9NYP7 299 aa9.49□□□□□ -0.89
SRP54-213ENST00000556994 F6UZH7 168 aa9.48□□□□□ -0.89
SRP54-213ENST00000556994 RRHO14718 337 aa9.48□□□□□ -0.89
SRP54-213ENST00000556994 FCGR3BO75015 233 aa9.48□□□□□ -0.89
SRP54-213ENST00000556994 CASP6P55212 293 aa9.48□□□□□ -0.89
SRP54-213ENST00000556994 FOXF2Q12947 444 aa9.48□□□□□ -0.89
SRP54-213ENST00000556994 DCAF10Q5QP82 559 aa9.48□□□□□ -0.89
SRP54-213ENST00000556994 MIC13Q5XKP0 118 aa9.48□□□□□ -0.89
SRP54-213ENST00000556994 C11orf53Q8IXP5 236 aa9.48□□□□□ -0.89
SRP54-213ENST00000556994 GCNT2Q8N0V5 402 aa9.48□□□□□ -0.89
SRP54-213ENST00000556994 OCC1Q8TAD7 63 aa9.48□□□□□ -0.89
SRP54-213ENST00000556994 MS4A10Q96PG2 267 aa9.48□□□□□ -0.89
SRP54-213ENST00000556994 NAGKQ9UJ70 344 aa9.48□□□□□ -0.89
SRP54-213ENST00000556994 WDR83OSQ9Y284 106 aa9.48□□□□□ -0.89
SRP54-213ENST00000556994 MDFIC2A0A1B0GVS7 189 aa9.48□□□□□ -0.89
SRP54-213ENST00000556994 AQP7O14520 342 aa9.48□□□□□ -0.89
SRP54-213ENST00000556994 TMPRSS2O15393 492 aa9.48□□□□□ -0.89
SRP54-213ENST00000556994 AGFG2O95081 481 aa9.48□□□□□ -0.89
SRP54-213ENST00000556994 SOX8P57073 446 aa9.48□□□□□ -0.89
SRP54-213ENST00000556994 ERVFC1-1P60608 527 aa9.48□□□□□ -0.89
SRP54-213ENST00000556994 RAB4BP61018 213 aa9.48□□□□□ -0.89
SRP54-213ENST00000556994 EDDM3AQ14507 147 aa9.48□□□□□ -0.89
SRP54-213ENST00000556994 TDRG1Q3Y452 100 aa9.48□□□□□ -0.89
SRP54-213ENST00000556994 CYB5R2Q6BCY4 276 aa9.48□□□□□ -0.89
SRP54-213ENST00000556994 SLC35E4Q6ICL7 350 aa9.48□□□□□ -0.89
SRP54-213ENST00000556994 TREML4Q6UXN2 200 aa9.48□□□□□ -0.89
SRP54-213ENST00000556994 ABHD12Q8N2K0 398 aa9.48□□□□□ -0.89
SRP54-213ENST00000556994 KLF14Q8TD94 323 aaPredicted RBP9.48□□□□□ -0.89
SRP54-213ENST00000556994 SSMEM1Q8WWF3 244 aa9.48□□□□□ -0.89
SRP54-213ENST00000556994 TAAR6Q96RI8 345 aa9.48□□□□□ -0.89
SRP54-213ENST00000556994 TBX15Q96SF7 602 aa9.48□□□□□ -0.89
SRP54-213ENST00000556994 KCNIP2Q9NS61 270 aa9.48□□□□□ -0.89
SRP54-213ENST00000556994 TRAV3A0A0B4J244 114 aa9.47□□□□□ -0.89
SRP54-213ENST00000556994 SLC17A3O00476 420 aa9.47□□□□□ -0.89
SRP54-213ENST00000556994 PROP1O75360 226 aa9.47□□□□□ -0.89
SRP54-213ENST00000556994 FRMD6-AS1P0C7T7 363 aa9.47□□□□□ -0.89
SRP54-213ENST00000556994 KITLGP21583 273 aa9.47□□□□□ -0.89
SRP54-213ENST00000556994 CBLN1P23435 193 aa9.47□□□□□ -0.89
SRP54-213ENST00000556994 UBE2NP61088 152 aaKnown RBP9.47□□□□□ -0.89
SRP54-213ENST00000556994 TGFBR3Q03167 851 aa9.47□□□□□ -0.89
SRP54-213ENST00000556994 FOXL1Q12952 345 aa9.47□□□□□ -0.89
SRP54-213ENST00000556994 MRPL49Q13405 166 aaKnown RBP9.47□□□□□ -0.89
SRP54-213ENST00000556994 DIRC2Q96SL1 478 aa9.47□□□□□ -0.89
SRP54-213ENST00000556994 PRO3102Q9H379 93 aa9.47□□□□□ -0.89
SRP54-213ENST00000556994 HES4Q9HCC6 221 aa9.47□□□□□ -0.89
SRP54-213ENST00000556994 MSL2Q9HCI7 577 aa9.47□□□□□ -0.89
SRP54-213ENST00000556994 HEYLQ9NQ87 328 aaPredicted RBP9.47□□□□□ -0.89
SRP54-213ENST00000556994 ABI3Q9P2A4 366 aa9.47□□□□□ -0.89
SRP54-213ENST00000556994 TET2Q6N021 2002 aaPredicted RBP9.47□□□□□ -0.89
SRP54-213ENST00000556994 IQCF6A8MYZ5 107 aa9.47□□□□□ -0.89
SRP54-213ENST00000556994 SP1P08047 785 aa9.47□□□□□ -0.89
SRP54-213ENST00000556994 IGHV1-2P23083 117 aa9.47□□□□□ -0.89
SRP54-213ENST00000556994 RPL29P47914 159 aaKnown RBP9.47□□□□□ -0.89
SRP54-213ENST00000556994 HLA-DRB5Q30154 266 aa9.47□□□□□ -0.89
SRP54-213ENST00000556994 PDLIM3Q53GG5 364 aaPredicted RBP9.47□□□□□ -0.89
SRP54-213ENST00000556994 RNFT1Q5M7Z0 435 aa9.47□□□□□ -0.89
SRP54-213ENST00000556994 C1orf194Q5T5A4 169 aa9.47□□□□□ -0.89
SRP54-213ENST00000556994 PRAMEF5Q5TYX0 476 aa9.47□□□□□ -0.89
SRP54-213ENST00000556994 ACP7Q6ZNF0 438 aa9.47□□□□□ -0.89
SRP54-213ENST00000556994 MGST2Q99735 147 aa9.47□□□□□ -0.89
SRP54-213ENST00000556994 MS4A5Q9H3V2 200 aa9.47□□□□□ -0.89
SRP54-213ENST00000556994 ZDHHC11Q9H8X9 412 aa9.47□□□□□ -0.89
SRP54-213ENST00000556994 SPRR3Q9UBC9 169 aa9.47□□□□□ -0.89
SRP54-213ENST00000556994 CFAP47Q6ZTR5 3102 aa9.46□□□□□ -0.89
SRP54-213ENST00000556994 A0A1W2PNU3 283 aaPredicted RBP9.46□□□□□ -0.9
SRP54-213ENST00000556994 CD99P14209 185 aa9.46□□□□□ -0.9
SRP54-213ENST00000556994 ARG2P78540 354 aa9.46□□□□□ -0.9
SRP54-213ENST00000556994 SPATA31B1PQ5VZV4 182 aa9.46□□□□□ -0.9
SRP54-213ENST00000556994 ZNF705AQ6ZN79 300 aaPredicted RBP9.46□□□□□ -0.9
SRP54-213ENST00000556994 IL17BQ9UHF5 180 aa9.46□□□□□ -0.9
SRP54-213ENST00000556994 TP53TG3Q9ULZ0 132 aa9.46□□□□□ -0.9
SRP54-213ENST00000556994 YTHDF2Q9Y5A9 579 aaKnown RBP9.46□□□□□ -0.9
SRP54-213ENST00000556994 PTPRBP23467 1997 aa9.46□□□□□ -0.9
SRP54-213ENST00000556994 M0R143 59 aa9.45□□□□□ -0.9
SRP54-213ENST00000556994 FOXH1O75593 365 aa9.45□□□□□ -0.9
SRP54-213ENST00000556994 FABP6P51161 128 aa9.45□□□□□ -0.9
SRP54-213ENST00000556994 RPL39P5Q59GN2 51 aa9.45□□□□□ -0.9
SRP54-213ENST00000556994 WDR82Q6UXN9 313 aa9.45□□□□□ -0.9
SRP54-213ENST00000556994 OR4A16Q8NH70 328 aa9.45□□□□□ -0.9
SRP54-213ENST00000556994 CMTM2Q8TAZ6 248 aa9.45□□□□□ -0.9
SRP54-213ENST00000556994 Q8TCH9 128 aa9.45□□□□□ -0.9
SRP54-213ENST00000556994 HSD17B10Q99714 261 aaKnown RBP9.45□□□□□ -0.9
SRP54-213ENST00000556994 SPRY4Q9C004 299 aa9.45□□□□□ -0.9
SRP54-213ENST00000556994 F2Z2F3 143 aa9.45□□□□□ -0.9
SRP54-213ENST00000556994 OR10J1P30954 320 aa9.45□□□□□ -0.9
SRP54-213ENST00000556994 DUTP33316 252 aaKnown RBP9.45□□□□□ -0.9
SRP54-213ENST00000556994 TIMP3P35625 211 aa9.45□□□□□ -0.9
SRP54-213ENST00000556994 GPR12P47775 334 aa9.45□□□□□ -0.9
SRP54-213ENST00000556994 ZNF90Q03938 601 aa9.45□□□□□ -0.9
SRP54-213ENST00000556994 TRIP6Q15654 476 aaKnown RBP9.45□□□□□ -0.9
SRP54-213ENST00000556994 TOMM20LQ6UXN7 152 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms