RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 SPRNQ5BIV9 151 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 CXorf66Q5JRM2 361 aaPredicted RBP3.66□□□□□ -1.82
SRP54-212ENST00000556992 STUMQ69YW2 141 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 ADAM5Q6NVV9 412 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 FGFRL1Q8N441 504 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 OR2C3Q8N628 320 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 UBAC2Q8NBM4 344 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.66□□□□□ -1.82
SRP54-212ENST00000556992 ZNRF1Q8ND25 227 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 RNASE11Q8TAA1 199 aaKnown RBP3.66□□□□□ -1.82
SRP54-212ENST00000556992 LHFPL5Q8TAF8 219 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 LINC01560Q8TB33 94 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 CCL17Q92583 94 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 GPR146Q96CH1 333 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 RAB39BQ96DA2 213 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 SAT2Q96F10 170 aaPredicted RBP3.66□□□□□ -1.82
SRP54-212ENST00000556992 CCL13Q99616 98 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 AGMATQ9BSE5 352 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 GAL3ST2Q9H3Q3 398 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 SAP30LQ9HAJ7 183 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.66□□□□□ -1.82
SRP54-212ENST00000556992 TMEM106BQ9NUM4 274 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 COA4Q9NYJ1 87 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 TAS2R3Q9NYW6 316 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 CALYQ9NYX4 217 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 PSG11Q9UQ72 335 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 PRELID3BQ9Y3B1 194 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 MMP24Q9Y5R2 645 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 SESN1Q9Y6P5 492 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 IGHV1-69-2A0A0G2JMI3 117 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.65□□□□□ -1.83
SRP54-212ENST00000556992 RPS10-NUDT3A0A1W2PQS6 291 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 FAM90A9PA6NNJ1 464 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 DEFB108AA8MXU0 73 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 TEX46H3BTG2 121 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 TOR1AO14656 332 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 TNFRSF13BO14836 293 aaPredicted RBP3.65□□□□□ -1.83
SRP54-212ENST00000556992 RAB29O14966 203 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 RBFOX2O43251 390 aaKnown RBP eCLIP3.65□□□□□ -1.83
SRP54-212ENST00000556992 FGF16O43320 207 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 CLDN14O95500 239 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 TOMM40O96008 361 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 KRASP01116 189 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 GYPAP02724 150 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 TFF1P04155 84 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 SEC11BP0C7V7 166 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 SSTR5P35346 364 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 RAB5CP51148 216 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 CAV2P51636 162 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 AKR1C2P52895 323 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 MRPS11P82912 194 aaKnown RBP3.65□□□□□ -1.83
SRP54-212ENST00000556992 ADORA2A-AS1P86434 159 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 BAXQ07812 192 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 EIF4EBP1Q13541 118 aaPredicted RBP3.65□□□□□ -1.83
SRP54-212ENST00000556992 LY6DQ14210 128 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 Q3ZCU0 254 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 ZNF672Q499Z4 452 aaPredicted RBP3.65□□□□□ -1.83
SRP54-212ENST00000556992 LRRC10Q5BKY1 277 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 Q6ZTC4 211 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 HSD17B13Q7Z5P4 300 aaPredicted RBP3.65□□□□□ -1.83
SRP54-212ENST00000556992 COMMD7Q86VX2 200 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 SPAG16Q8N0X2 631 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 MUC15Q8N387 334 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 ZNF843Q8N446 348 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 EIF4E3Q8N5X7 224 aaKnown RBP3.65□□□□□ -1.83
SRP54-212ENST00000556992 TPRX1Q8N7U7 411 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 DMBX1Q8NFW5 382 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 UBALD1Q8TB05 177 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 TCTEX1D2Q8WW35 142 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 MARC2Q969Z3 335 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 ADTRPQ96IZ2 230 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 SMIM8Q96KF7 97 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 GAFA1Q96PS6 74 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 S1PR3Q99500 378 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 TMEM204Q9BSN7 226 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 DCTN5Q9BTE1 182 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 PARP12Q9H0J9 701 aaKnown RBP3.65□□□□□ -1.83
SRP54-212ENST00000556992 RAB1BQ9H0U4 201 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 OR2D2Q9H210 308 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 ARV1Q9H2C2 271 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 LYRM2Q9NU23 88 aaPredicted RBP3.65□□□□□ -1.83
SRP54-212ENST00000556992 SDHAF2Q9NX18 166 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 IDI2-AS1Q9NZ38 188 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 MDFICQ9P1T7 246 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 KAAG1Q9UBP8 84 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 RCL1Q9Y2P8 373 aaKnown RBP3.65□□□□□ -1.83
SRP54-212ENST00000556992 LINC00312Q9Y6C7 94 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 WSB1Q9Y6I7 421 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 MED13Q9UHV7 2174 aa3.65□□□□□ -1.83
SRP54-212ENST00000556992 MTORP42345 2549 aa3.64□□□□□ -1.83
SRP54-212ENST00000556992 TLN1Q9Y490 2541 aaKnown RBP3.64□□□□□ -1.83
SRP54-212ENST00000556992 A0A1W2PPH5 198 aa3.64□□□□□ -1.83
SRP54-212ENST00000556992 RAB19A4D1S5 217 aa3.64□□□□□ -1.83
SRP54-212ENST00000556992 MFSD2BA6NFX1 497 aa3.64□□□□□ -1.83
SRP54-212ENST00000556992 MSGN1A6NI15 193 aa3.64□□□□□ -1.83
SRP54-212ENST00000556992 UMAD1C9J7I0 102 aa3.64□□□□□ -1.83
SRP54-212ENST00000556992 KRBOX1C9JBD0 128 aa3.64□□□□□ -1.83
SRP54-212ENST00000556992 M0R1X1 148 aa3.64□□□□□ -1.83
SRP54-212ENST00000556992 SYNGR2O43760 224 aa3.64□□□□□ -1.83
SRP54-212ENST00000556992 SSSCA1O60232 199 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms