RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 PGPEP1LA6NFU8 196 aa5.7□□□□□ -1.5
SCFD1-222ENST00000556768 CA2P00918 260 aa5.7□□□□□ -1.5
SCFD1-222ENST00000556768 SDC2P34741 201 aa5.7□□□□□ -1.5
SCFD1-222ENST00000556768 TPPP2P59282 170 aa5.7□□□□□ -1.5
SCFD1-222ENST00000556768 KRTAP10-11P60412 298 aa5.7□□□□□ -1.5
SCFD1-222ENST00000556768 PLA2G7Q13093 441 aa5.7□□□□□ -1.5
SCFD1-222ENST00000556768 NEDD8Q15843 81 aa5.7□□□□□ -1.5
SCFD1-222ENST00000556768 VMA21Q3ZAQ7 101 aa5.7□□□□□ -1.5
SCFD1-222ENST00000556768 IDNKQ5T6J7 187 aa5.7□□□□□ -1.5
SCFD1-222ENST00000556768 ZNF429Q86V71 674 aa5.7□□□□□ -1.5
SCFD1-222ENST00000556768 CROCCP3Q8IVE0 287 aa5.7□□□□□ -1.5
SCFD1-222ENST00000556768 GRPEL2Q8TAA5 225 aa5.7□□□□□ -1.5
SCFD1-222ENST00000556768 OR51E2Q9H255 320 aa5.7□□□□□ -1.5
SCFD1-222ENST00000556768 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.7□□□□□ -1.54e-7■■■■■ 32.6
SCFD1-222ENST00000556768 SLC45A2Q9UMX9 530 aa5.7□□□□□ -1.5
SCFD1-222ENST00000556768 ETV7Q9Y603 341 aa5.7□□□□□ -1.5
SCFD1-222ENST00000556768 PLXNB1O43157 2135 aa5.7□□□□□ -1.5
SCFD1-222ENST00000556768 DNAH3Q8TD57 4116 aa5.7□□□□□ -1.5
SCFD1-222ENST00000556768 A0A0A6YYH2 397 aa5.69□□□□□ -1.5
SCFD1-222ENST00000556768 LOC102723971A0A1B0GUV8 181 aa5.69□□□□□ -1.5
SCFD1-222ENST00000556768 C13orf42A0A1B0GVH6 325 aa5.69□□□□□ -1.5
SCFD1-222ENST00000556768 WI2-2373I1.2A0A1W2PRP0 233 aa5.69□□□□□ -1.5
SCFD1-222ENST00000556768 A6NJ64 397 aa5.69□□□□□ -1.5
SCFD1-222ENST00000556768 LINC01619G3V211 115 aa5.69□□□□□ -1.5
SCFD1-222ENST00000556768 I3L521 148 aa5.69□□□□□ -1.5
SCFD1-222ENST00000556768 K7EIL1 84 aa5.69□□□□□ -1.5
SCFD1-222ENST00000556768 PROP1O75360 226 aa5.69□□□□□ -1.5
SCFD1-222ENST00000556768 TRGV3P03979 118 aa5.69□□□□□ -1.5
SCFD1-222ENST00000556768 CRIP2P52943 208 aaPredicted RBP5.69□□□□□ -1.5
SCFD1-222ENST00000556768 ARPC4P59998 168 aa5.69□□□□□ -1.5
SCFD1-222ENST00000556768 FHL3Q13643 280 aa5.69□□□□□ -1.5
SCFD1-222ENST00000556768 KCTD21Q4G0X4 260 aa5.69□□□□□ -1.5
SCFD1-222ENST00000556768 CNIH2Q6PI25 160 aa5.69□□□□□ -1.5
SCFD1-222ENST00000556768 OSR1Q8TAX0 266 aaPredicted RBP5.69□□□□□ -1.5
SCFD1-222ENST00000556768 MYOZ3Q8TDC0 251 aa5.69□□□□□ -1.5
SCFD1-222ENST00000556768 MS4A10Q96PG2 267 aa5.69□□□□□ -1.5
SCFD1-222ENST00000556768 PHB2Q99623 299 aa5.69□□□□□ -1.5
SCFD1-222ENST00000556768 FAM103A1Q9BTL3 118 aaKnown RBP5.69□□□□□ -1.5
SCFD1-222ENST00000556768 TINAGL1Q9GZM7 467 aaPredicted RBP5.69□□□□□ -1.5
SCFD1-222ENST00000556768 RHBDL2Q9NX52 303 aa5.69□□□□□ -1.5
SCFD1-222ENST00000556768 MRPS7Q9Y2R9 242 aaKnown RBP5.69□□□□□ -1.5
SCFD1-222ENST00000556768 OR2W1Q9Y3N9 320 aa5.69□□□□□ -1.5
SCFD1-222ENST00000556768 TMEM235A6NFC5 223 aa5.69□□□□□ -1.5
SCFD1-222ENST00000556768 ZNF785A8K8V0 405 aa5.69□□□□□ -1.5
SCFD1-222ENST00000556768 H3BUA1 57 aa5.69□□□□□ -1.5
SCFD1-222ENST00000556768 J3QRK9 145 aa5.69□□□□□ -1.5
SCFD1-222ENST00000556768 OVOL1O14753 267 aa5.69□□□□□ -1.5
SCFD1-222ENST00000556768 MPPED1O15442 326 aa5.69□□□□□ -1.5
SCFD1-222ENST00000556768 CRYZL1O95825 349 aa5.69□□□□□ -1.5
SCFD1-222ENST00000556768 HSPB1P04792 205 aaKnown RBP5.69□□□□□ -1.5
SCFD1-222ENST00000556768 LINC00205P59089 165 aa5.69□□□□□ -1.5
SCFD1-222ENST00000556768 TATDN3Q17R31 274 aa5.69□□□□□ -1.5
SCFD1-222ENST00000556768 NR2C2APQ86WQ0 139 aa5.69□□□□□ -1.5
SCFD1-222ENST00000556768 H1FOOQ8IZA3 346 aaPredicted RBP5.69□□□□□ -1.5
SCFD1-222ENST00000556768 ZNF645Q8N7E2 425 aa5.69□□□□□ -1.5
SCFD1-222ENST00000556768 TEX45Q8NA69 505 aa5.69□□□□□ -1.5
SCFD1-222ENST00000556768 POC5Q8NA72 575 aa5.69□□□□□ -1.5
SCFD1-222ENST00000556768 LGALS14Q8TCE9 139 aa5.69□□□□□ -1.5
SCFD1-222ENST00000556768 S100A16Q96FQ6 103 aaKnown RBP5.69□□□□□ -1.5
SCFD1-222ENST00000556768 OR4C12Q96R67 309 aa5.69□□□□□ -1.5
SCFD1-222ENST00000556768 AIFM2Q9BRQ8 373 aa5.69□□□□□ -1.5
SCFD1-222ENST00000556768 ELOVL1Q9BW60 279 aa5.69□□□□□ -1.5
SCFD1-222ENST00000556768 GNB4Q9HAV0 340 aa5.69□□□□□ -1.5
SCFD1-222ENST00000556768 RANGRFQ9HD47 186 aaPredicted RBP5.69□□□□□ -1.5
SCFD1-222ENST00000556768 ANXA10Q9UJ72 324 aa5.69□□□□□ -1.5
SCFD1-222ENST00000556768 TRAV18A0A075B6X5 111 aa5.68□□□□□ -1.5
SCFD1-222ENST00000556768 A0A087WXM4 84 aa5.68□□□□□ -1.5
SCFD1-222ENST00000556768 SAP30O75446 220 aa5.68□□□□□ -1.5
SCFD1-222ENST00000556768 TNFAIP8O95379 198 aa5.68□□□□□ -1.5
SCFD1-222ENST00000556768 LGALS1P09382 135 aaKnown RBP5.68□□□□□ -1.5
SCFD1-222ENST00000556768 ZP3P21754 424 aa5.68□□□□□ -1.5
SCFD1-222ENST00000556768 AADACP22760 399 aa5.68□□□□□ -1.5
SCFD1-222ENST00000556768 NFYAP23511 347 aaPredicted RBP5.68□□□□□ -1.5
SCFD1-222ENST00000556768 DUTP33316 252 aaKnown RBP5.68□□□□□ -1.5
SCFD1-222ENST00000556768 NDPQ00604 133 aa5.68□□□□□ -1.5
SCFD1-222ENST00000556768 VAX1Q5SQQ9 334 aa5.68□□□□□ -1.5
SCFD1-222ENST00000556768 KCTD9Q7L273 389 aa5.68□□□□□ -1.5
SCFD1-222ENST00000556768 OR5T1Q8NG75 326 aa5.68□□□□□ -1.5
SCFD1-222ENST00000556768 VSTM2AQ8TAG5 236 aa5.68□□□□□ -1.5
SCFD1-222ENST00000556768 CASTOR1Q8WTX7 329 aa5.68□□□□□ -1.5
SCFD1-222ENST00000556768 NUDCD2Q8WVJ2 157 aa5.68□□□□□ -1.5
SCFD1-222ENST00000556768 ACOT12Q8WYK0 555 aa5.68□□□□□ -1.5
SCFD1-222ENST00000556768 HSD17B10Q99714 261 aaKnown RBP5.68□□□□□ -1.5
SCFD1-222ENST00000556768 SPIN2AQ99865 258 aa5.68□□□□□ -1.5
SCFD1-222ENST00000556768 SPIN2BQ9BPZ2 258 aa5.68□□□□□ -1.5
SCFD1-222ENST00000556768 ZNF256Q9Y2P7 627 aaPredicted RBP5.68□□□□□ -1.5
SCFD1-222ENST00000556768 M0QYG6 137 aa5.67□□□□□ -1.5
SCFD1-222ENST00000556768 AIREO43918 545 aa5.67□□□□□ -1.5
SCFD1-222ENST00000556768 SOX15O60248 233 aa5.67□□□□□ -1.5
SCFD1-222ENST00000556768 FCGR3BO75015 233 aa5.67□□□□□ -1.5
SCFD1-222ENST00000556768 IGHV3-11P01762 117 aa5.67□□□□□ -1.5
SCFD1-222ENST00000556768 HLA-DQB1P01920 261 aa5.67□□□□□ -1.5
SCFD1-222ENST00000556768 NHLRC4P0CG21 123 aaPredicted RBP5.67□□□□□ -1.5
SCFD1-222ENST00000556768 EGR2P11161 476 aaPredicted RBP5.67□□□□□ -1.5
SCFD1-222ENST00000556768 CBX5P45973 191 aa5.67□□□□□ -1.5
SCFD1-222ENST00000556768 UBE2KP61086 200 aa5.67□□□□□ -1.5
SCFD1-222ENST00000556768 KIAA0141Q14154 515 aaPredicted RBP5.67□□□□□ -1.5
SCFD1-222ENST00000556768 TNXAQ16473 311 aa5.67□□□□□ -1.5
SCFD1-222ENST00000556768 BEST4Q8NFU0 473 aa5.67□□□□□ -1.5
SCFD1-222ENST00000556768 TSPAN14Q8NG11 270 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms