RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 FCGR3BO75015 233 aa7.56□□□□□ -1.2
SRP54-210ENST00000556380 CRYZL1O95825 349 aa7.56□□□□□ -1.2
SRP54-210ENST00000556380 TSPAN15O95858 294 aa7.56□□□□□ -1.2
SRP54-210ENST00000556380 CD3DP04234 171 aa7.56□□□□□ -1.2
SRP54-210ENST00000556380 TBPP20226 339 aa7.56□□□□□ -1.2
SRP54-210ENST00000556380 ADMP35318 185 aa7.56□□□□□ -1.2
SRP54-210ENST00000556380 FXYD4P59646 89 aa7.56□□□□□ -1.2
SRP54-210ENST00000556380 UBE2KP61086 200 aa7.56□□□□□ -1.2
SRP54-210ENST00000556380 HERV-K104P61576 105 aa7.56□□□□□ -1.2
SRP54-210ENST00000556380 PJVKQ0ZLH3 352 aa7.56□□□□□ -1.2
SRP54-210ENST00000556380 ACTBL2Q562R1 376 aa7.56□□□□□ -1.2
SRP54-210ENST00000556380 RNASE12Q5GAN4 147 aaKnown RBP7.56□□□□□ -1.2
SRP54-210ENST00000556380 AADACL3Q5VUY0 350 aa7.56□□□□□ -1.2
SRP54-210ENST00000556380 KCTD9Q7L273 389 aa7.56□□□□□ -1.2
SRP54-210ENST00000556380 LHFPL1Q86WI0 220 aa7.56□□□□□ -1.2
SRP54-210ENST00000556380 TMEM229BQ8NBD8 167 aa7.56□□□□□ -1.2
SRP54-210ENST00000556380 MINDY2Q8NBR6 621 aa7.56□□□□□ -1.2
SRP54-210ENST00000556380 OSR1Q8TAX0 266 aaPredicted RBP7.56□□□□□ -1.2
SRP54-210ENST00000556380 TINAGL1Q9GZM7 467 aaPredicted RBP7.56□□□□□ -1.2
SRP54-210ENST00000556380 FXYD6Q9H0Q3 95 aa7.56□□□□□ -1.2
SRP54-210ENST00000556380 NUBP2Q9Y5Y2 271 aa7.56□□□□□ -1.2
SRP54-210ENST00000556380 TCRBV4S1A1TA0A5B7 111 aa7.55□□□□□ -1.2
SRP54-210ENST00000556380 FABP12A6NFH5 140 aa7.55□□□□□ -1.2
SRP54-210ENST00000556380 G3V318 75 aa7.55□□□□□ -1.2
SRP54-210ENST00000556380 M0QYG6 137 aa7.55□□□□□ -1.2
SRP54-210ENST00000556380 ATP6V0E1O15342 81 aa7.55□□□□□ -1.2
SRP54-210ENST00000556380 RBFOX2O43251 390 aaKnown RBP eCLIP7.55□□□□□ -1.2
SRP54-210ENST00000556380 TNFSF12O43508 249 aa7.55□□□□□ -1.2
SRP54-210ENST00000556380 RAMP3O60896 148 aa7.55□□□□□ -1.2
SRP54-210ENST00000556380 PGLYRP1O75594 196 aaPredicted RBP7.55□□□□□ -1.2
SRP54-210ENST00000556380 CA2P00918 260 aa7.55□□□□□ -1.2
SRP54-210ENST00000556380 IGHG4P01861 327 aa7.55□□□□□ -1.2
SRP54-210ENST00000556380 ZNF735P0CB33 412 aa7.55□□□□□ -1.2
SRP54-210ENST00000556380 UCP3P55916 312 aa7.55□□□□□ -1.2
SRP54-210ENST00000556380 FOXE3Q13461 319 aa7.55□□□□□ -1.2
SRP54-210ENST00000556380 IL18Q14116 193 aa7.55□□□□□ -1.2
SRP54-210ENST00000556380 KIAA0141Q14154 515 aaPredicted RBP7.55□□□□□ -1.2
SRP54-210ENST00000556380 C2orf68Q2NKX9 166 aa7.55□□□□□ -1.2
SRP54-210ENST00000556380 NSUN5P1Q3KNT7 163 aa7.55□□□□□ -1.2
SRP54-210ENST00000556380 CCDC190Q86UF4 302 aa7.55□□□□□ -1.2
SRP54-210ENST00000556380 PPP1R27Q86WC6 154 aa7.55□□□□□ -1.2
SRP54-210ENST00000556380 TMEM17Q86X19 198 aa7.55□□□□□ -1.2
SRP54-210ENST00000556380 COMMD1Q8N668 190 aa7.55□□□□□ -1.2
SRP54-210ENST00000556380 TEX45Q8NA69 505 aa7.55□□□□□ -1.2
SRP54-210ENST00000556380 OR4D10Q8NGI6 311 aa7.55□□□□□ -1.2
SRP54-210ENST00000556380 TCTEX1D2Q8WW35 142 aa7.55□□□□□ -1.2
SRP54-210ENST00000556380 HARBI1Q96MB7 349 aa7.55□□□□□ -1.2
SRP54-210ENST00000556380 CLCC1Q96S66 551 aa7.55□□□□□ -1.2
SRP54-210ENST00000556380 RSRP1Q9BUV0 290 aa7.55□□□□□ -1.2
SRP54-210ENST00000556380 GON7Q9BXV9 100 aa7.55□□□□□ -1.2
SRP54-210ENST00000556380 PRELID3BQ9Y3B1 194 aa7.55□□□□□ -1.2
SRP54-210ENST00000556380 TSSC4Q9Y5U2 329 aaPredicted RBP7.55□□□□□ -1.2
SRP54-210ENST00000556380 WSB1Q9Y6I7 421 aa7.55□□□□□ -1.2
SRP54-210ENST00000556380 TET2Q6N021 2002 aaPredicted RBP7.54□□□□□ -1.2
SRP54-210ENST00000556380 GPR31O00270 319 aa7.54□□□□□ -1.2
SRP54-210ENST00000556380 SOX15O60248 233 aa7.54□□□□□ -1.2
SRP54-210ENST00000556380 OPN1MWP04001 364 aa7.54□□□□□ -1.2
SRP54-210ENST00000556380 ELANEP08246 267 aa7.54□□□□□ -1.2
SRP54-210ENST00000556380 IL6RP08887 468 aaPredicted RBP7.54□□□□□ -1.2
SRP54-210ENST00000556380 CSF1P09603 554 aa7.54□□□□□ -1.2
SRP54-210ENST00000556380 SAA1P0DJI8 122 aaPredicted RBP7.54□□□□□ -1.2
SRP54-210ENST00000556380 OPN1MW2P0DN77 364 aa7.54□□□□□ -1.2
SRP54-210ENST00000556380 OPN1MW3P0DN78 364 aa7.54□□□□□ -1.2
SRP54-210ENST00000556380 PTBP1P26599 531 aaKnown RBP eCLIP7.54□□□□□ -1.2
SRP54-210ENST00000556380 PSMB8P28062 276 aa7.54□□□□□ -1.2
SRP54-210ENST00000556380 ETV6P41212 452 aa7.54□□□□□ -1.2
SRP54-210ENST00000556380 KIR2DS2P43631 304 aa7.54□□□□□ -1.2
SRP54-210ENST00000556380 TSPAN5P62079 268 aa7.54□□□□□ -1.2
SRP54-210ENST00000556380 SLC35B1P78383 322 aa7.54□□□□□ -1.2
SRP54-210ENST00000556380 CBX3Q13185 183 aa7.54□□□□□ -1.2
SRP54-210ENST00000556380 ZNF79Q15937 498 aa7.54□□□□□ -1.2
SRP54-210ENST00000556380 PRSS8Q16651 343 aa7.54□□□□□ -1.2
SRP54-210ENST00000556380 OR2B11Q5JQS5 317 aa7.54□□□□□ -1.2
SRP54-210ENST00000556380 STEAP1BQ6NZ63 245 aa7.54□□□□□ -1.2
SRP54-210ENST00000556380 TEX38Q6PEX7 206 aa7.54□□□□□ -1.2
SRP54-210ENST00000556380 SPAG16Q8N0X2 631 aa7.54□□□□□ -1.2
SRP54-210ENST00000556380 PUSL1Q8N0Z8 303 aaKnown RBP7.54□□□□□ -1.2
SRP54-210ENST00000556380 ARRDC1Q8N5I2 433 aa7.54□□□□□ -1.2
SRP54-210ENST00000556380 OR4X2Q8NGF9 303 aa7.54□□□□□ -1.2
SRP54-210ENST00000556380 OR6Q1Q8NGQ2 317 aa7.54□□□□□ -1.2
SRP54-210ENST00000556380 OR4S2Q8NH73 311 aa7.54□□□□□ -1.2
SRP54-210ENST00000556380 MYOZ3Q8TDC0 251 aa7.54□□□□□ -1.2
SRP54-210ENST00000556380 MRGPRFQ96AM1 343 aa7.54□□□□□ -1.2
SRP54-210ENST00000556380 KLK15Q9H2R5 256 aa7.54□□□□□ -1.2
SRP54-210ENST00000556380 PARP11Q9NR21 331 aa7.54□□□□□ -1.2
SRP54-210ENST00000556380 ZFP57Q9NU63 452 aa7.54□□□□□ -1.2
SRP54-210ENST00000556380 V9GYH0 126 aa7.54□□□□□ -1.2
SRP54-210ENST00000556380 TRAV41A0A0B4J266 112 aa7.53□□□□□ -1.2
SRP54-210ENST00000556380 ANKRD20A5PA0PJZ0 165 aa7.53□□□□□ -1.2
SRP54-210ENST00000556380 RAB3DO95716 219 aa7.53□□□□□ -1.2
SRP54-210ENST00000556380 VDAC1P21796 283 aa7.53□□□□□ -1.2
SRP54-210ENST00000556380 S100A5P33763 92 aa7.53□□□□□ -1.2
SRP54-210ENST00000556380 TAS2R19P59542 299 aa7.53□□□□□ -1.2
SRP54-210ENST00000556380 RPL23AP62750 156 aaKnown RBP7.53□□□□□ -1.2
SRP54-210ENST00000556380 FXYD3Q14802 87 aa7.53□□□□□ -1.2
SRP54-210ENST00000556380 PLGLAQ15195 96 aa7.53□□□□□ -1.2
SRP54-210ENST00000556380 POU2AF1Q16633 256 aa7.53□□□□□ -1.2
SRP54-210ENST00000556380 VMA21Q3ZAQ7 101 aa7.53□□□□□ -1.2
SRP54-210ENST00000556380 ZNF585BQ52M93 769 aa7.53□□□□□ -1.2
SRP54-210ENST00000556380 AKIRIN2Q53H80 203 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms