RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 SUMO2P61956 95 aaKnown RBP3.69□□□□□ -1.82
ATXN3-241ENST00000556374 RPP30P78346 268 aaKnown RBP3.69□□□□□ -1.82
ATXN3-241ENST00000556374 SERF2P84101 59 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 RUNX1Q01196 453 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 SLC38A11Q08AI6 406 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 TGIF1Q15583 401 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 ADIRFQ15847 76 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 ATP6V1FQ16864 119 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 RSPO1Q2MKA7 263 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-241ENST00000556374 ACSF3Q4G176 576 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-241ENST00000556374 NMSQ5H8A3 153 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 CXorf66Q5JRM2 361 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-241ENST00000556374 KHDC1LQ5JSQ8 128 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 FAM209BQ5JX69 171 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 NCMAPQ5T1S8 102 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 C10orf25Q5T742 122 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 COLCA1Q6ZS62 124 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 NUFIP2Q7Z417 695 aaKnown RBP3.69□□□□□ -1.82
ATXN3-241ENST00000556374 Q8NFD4 153 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 OR2M7Q8NG81 312 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 CLDND2Q8NHS1 167 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 SPATA3Q8NHX4 192 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 MRPL30Q8TCC3 161 aaKnown RBP3.69□□□□□ -1.82
ATXN3-241ENST00000556374 RDH5Q92781 318 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 ZNF845Q96IR2 970 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-241ENST00000556374 THOC3Q96J01 351 aaKnown RBP3.69□□□□□ -1.82
ATXN3-241ENST00000556374 ADGRG7Q96K78 797 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 FAM210BQ96KR6 192 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 CIB3Q96Q77 187 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-241ENST00000556374 RARRES2Q99969 163 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 TMEM147Q9BVK8 224 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 PARD6GQ9BYG4 376 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-241ENST00000556374 MAP1LC3BQ9GZQ8 125 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 LIME1Q9H400 295 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 SEBOXQ9HB31 216 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-241ENST00000556374 PROK2Q9HC23 129 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 KCNIP2Q9NS61 270 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 TREM2Q9NZC2 230 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 TAAR3PQ9P1P4 343 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 ZMAT5Q9UDW3 170 aaKnown RBP3.69□□□□□ -1.82
ATXN3-241ENST00000556374 OR14J1Q9UGF5 321 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 NAT8Q9UHE5 227 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 GAB2Q9UQC2 676 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 TIMM9Q9Y5J7 89 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 URGCP-MRPS24S4R325 110 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 U3KQA8 63 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 CCDC168Q8NDH2 2452 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 EML6Q6ZMW3 1958 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 ESPL1Q14674 2120 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 AKAP9Q99996 3911 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 SHANK1Q9Y566 2161 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 FER1L5A0AVI2 2057 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 A0A087WWL8 130 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 TRAV1-1A0A0B4J248 108 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 IGKV1D-13A0A0B4J2D9 117 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 TMEM210A6NLX4 147 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 FAM166BA8MTA8 275 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 C21orf140B9A014 251 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 PPP5D1E7EU14 171 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 KLRC4-KLRK1H3BQV0 150 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 H7BYZ3 331 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 SIRPB1O00241 398 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 SH2D1BO14796 132 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 SYNGR1O43759 233 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 SOX15O60248 233 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 IFNA10P01566 189 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 WNT2P09544 360 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 IGKV1-13P0DP09 117 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 CCL4P13236 92 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 COX5AP20674 150 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 FGF7P21781 194 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 IL2RGP31785 369 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 CCKARP32238 428 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 UQCRFS1P47985 274 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 IDH3GP51553 393 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-241ENST00000556374 KRTAP10-6P60371 365 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-241ENST00000556374 ERVK-16P61578 105 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 TGFBR3Q03167 851 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 ZFP36L1Q07352 338 aaKnown RBP3.68□□□□□ -1.82
ATXN3-241ENST00000556374 MZT1Q08AG7 82 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 ELOBQ15370 118 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 GABRA6Q16445 453 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 ACOT6Q3I5F7 207 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-241ENST00000556374 SPANXN5Q5MJ07 72 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 DNLZQ5SXM8 178 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 OR2T2Q6IF00 324 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 OR8G2PQ6IF36 304 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 TRAT1Q6PIZ9 186 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 SPSB3Q6PJ21 355 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 LCN15Q6UWW0 184 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 TUSC5Q8IXB3 177 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 TCTEX1D1Q8N7M0 179 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 ZBTB34Q8NCN2 500 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 Q8WTZ3 238 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 TMEM171Q8WVE6 324 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 OR5P3Q8WZ94 311 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 LHX4Q969G2 390 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 GPR146Q96CH1 333 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 CYYR1Q96J86 154 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 SMIM7Q9BQ49 75 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms