RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 IAH1Q2TAA2 248 aaPredicted RBP8.23□□□□□ -1.09
SRP54-208ENST00000555557 LRRC37A5PQ49AS3 106 aa8.23□□□□□ -1.09
SRP54-208ENST00000555557 KLF17Q5JT82 389 aaPredicted RBP8.23□□□□□ -1.09
SRP54-208ENST00000555557 Q6ZRM9 215 aa8.23□□□□□ -1.09
SRP54-208ENST00000555557 TCTEX1D1Q8N7M0 179 aa8.23□□□□□ -1.09
SRP54-208ENST00000555557 RNASE11Q8TAA1 199 aaKnown RBP8.23□□□□□ -1.09
SRP54-208ENST00000555557 CD300LFQ8TDQ1 290 aa8.23□□□□□ -1.09
SRP54-208ENST00000555557 IL22RA2Q969J5 263 aa8.23□□□□□ -1.09
SRP54-208ENST00000555557 GPR146Q96CH1 333 aa8.23□□□□□ -1.09
SRP54-208ENST00000555557 RITA1Q96K30 269 aa8.23□□□□□ -1.09
SRP54-208ENST00000555557 OR2A7Q96R45 310 aa8.23□□□□□ -1.09
SRP54-208ENST00000555557 TMED3Q9Y3Q3 217 aa8.23□□□□□ -1.09
SRP54-208ENST00000555557 HSPB11Q9Y547 144 aa8.23□□□□□ -1.09
SRP54-208ENST00000555557 IGHV1-69DA0A0B4J2H0 117 aa8.23□□□□□ -1.09
SRP54-208ENST00000555557 SRRM4A7MD48 611 aaKnown RBP8.23□□□□□ -1.09
SRP54-208ENST00000555557 TIMM23O14925 209 aa8.23□□□□□ -1.09
SRP54-208ENST00000555557 NXPH3O95157 252 aa8.23□□□□□ -1.09
SRP54-208ENST00000555557 IGHV1-69P01742 117 aa8.23□□□□□ -1.09
SRP54-208ENST00000555557 APOA2P02652 100 aa8.23□□□□□ -1.09
SRP54-208ENST00000555557 CEACAM3P40198 252 aa8.23□□□□□ -1.09
SRP54-208ENST00000555557 KIR2DS2P43631 304 aa8.23□□□□□ -1.09
SRP54-208ENST00000555557 RAB13P51153 203 aa8.23□□□□□ -1.09
SRP54-208ENST00000555557 RTL8BQ17RB0 113 aa8.23□□□□□ -1.09
SRP54-208ENST00000555557 NMSQ5H8A3 153 aa8.23□□□□□ -1.09
SRP54-208ENST00000555557 GPR157Q5UAW9 335 aa8.23□□□□□ -1.09
SRP54-208ENST00000555557 OR8H1Q8NGG4 311 aa8.23□□□□□ -1.09
SRP54-208ENST00000555557 OR2T35Q8NGX2 323 aa8.23□□□□□ -1.09
SRP54-208ENST00000555557 OR4S2Q8NH73 311 aa8.23□□□□□ -1.09
SRP54-208ENST00000555557 R3HDM4Q96D70 268 aa8.23□□□□□ -1.09
SRP54-208ENST00000555557 RANBP3Q9H6Z4 567 aaPredicted RBP8.23□□□□□ -1.09
SRP54-208ENST00000555557 PLEKHA2Q9HB19 425 aa8.23□□□□□ -1.09
SRP54-208ENST00000555557 ZMAT5Q9UDW3 170 aaKnown RBP8.23□□□□□ -1.09
SRP54-208ENST00000555557 MARCH11A6NNE9 402 aa8.22□□□□□ -1.09
SRP54-208ENST00000555557 RBFOX2O43251 390 aaKnown RBP eCLIP8.22□□□□□ -1.09
SRP54-208ENST00000555557 GIPP09681 153 aaPredicted RBP8.22□□□□□ -1.09
SRP54-208ENST00000555557 FBLN7Q53RD9 439 aa8.22□□□□□ -1.09
SRP54-208ENST00000555557 MINOS1Q5TGZ0 78 aa8.22□□□□□ -1.09
SRP54-208ENST00000555557 LAMTOR1Q6IAA8 161 aa8.22□□□□□ -1.09
SRP54-208ENST00000555557 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.22□□□□□ -1.09
SRP54-208ENST00000555557 DMBX1Q8NFW5 382 aa8.22□□□□□ -1.09
SRP54-208ENST00000555557 FLYWCH2Q96CP2 140 aaKnown RBP8.22□□□□□ -1.09
SRP54-208ENST00000555557 RRNAD1Q96FB5 475 aaKnown RBP8.22□□□□□ -1.09
SRP54-208ENST00000555557 C2orf50Q96LR7 162 aa8.22□□□□□ -1.09
SRP54-208ENST00000555557 ZC4H2Q9NQZ6 224 aa8.22□□□□□ -1.09
SRP54-208ENST00000555557 FAM212BQ9NTI7 297 aaPredicted RBP8.22□□□□□ -1.09
SRP54-208ENST00000555557 NSG2Q9Y328 171 aa8.22□□□□□ -1.09
SRP54-208ENST00000555557 WASHC3Q9Y3C0 194 aa8.22□□□□□ -1.09
SRP54-208ENST00000555557 MINOS1-NBL1R4GNA1 71 aa8.22□□□□□ -1.09
SRP54-208ENST00000555557 G3V3Q6 166 aa8.21□□□□□ -1.09
SRP54-208ENST00000555557 I3L521 148 aa8.21□□□□□ -1.09
SRP54-208ENST00000555557 NQO2P16083 231 aa8.21□□□□□ -1.09
SRP54-208ENST00000555557 RPS16P62249 146 aaKnown RBP8.21□□□□□ -1.09
SRP54-208ENST00000555557 MIDNQ504T8 468 aa8.21□□□□□ -1.09
SRP54-208ENST00000555557 PDPNQ86YL7 162 aa8.21□□□□□ -1.09
SRP54-208ENST00000555557 FOXRED2Q8IWF2 684 aa8.21□□□□□ -1.09
SRP54-208ENST00000555557 PPP1R1CQ8WVI7 109 aa8.21□□□□□ -1.09
SRP54-208ENST00000555557 CFHR4Q92496 578 aa8.21□□□□□ -1.09
SRP54-208ENST00000555557 MALSU1Q96EH3 234 aa8.21□□□□□ -1.09
SRP54-208ENST00000555557 HARBI1Q96MB7 349 aa8.21□□□□□ -1.09
SRP54-208ENST00000555557 CACNG5Q9UF02 275 aa8.21□□□□□ -1.09
SRP54-208ENST00000555557 TBL2Q9Y4P3 447 aaKnown RBP8.21□□□□□ -1.09
SRP54-208ENST00000555557 FLNAP21333 2647 aaKnown RBP8.21□□□□□ -1.1
SRP54-208ENST00000555557 TRAV3A0A0B4J244 114 aa8.21□□□□□ -1.1
SRP54-208ENST00000555557 A0A0U1RQK1 487 aa8.21□□□□□ -1.1
SRP54-208ENST00000555557 DUXBA0A1W2PPF3 345 aa8.21□□□□□ -1.1
SRP54-208ENST00000555557 J3QLI3 93 aa8.21□□□□□ -1.1
SRP54-208ENST00000555557 TXNL1O43396 289 aa8.21□□□□□ -1.1
SRP54-208ENST00000555557 SCO1O75880 301 aa8.21□□□□□ -1.1
SRP54-208ENST00000555557 SCGB1D2O95969 90 aa8.21□□□□□ -1.1
SRP54-208ENST00000555557 OR9G9P0C7N8 305 aa8.21□□□□□ -1.1
SRP54-208ENST00000555557 CNTFRP26992 372 aa8.21□□□□□ -1.1
SRP54-208ENST00000555557 MC5RP33032 325 aa8.21□□□□□ -1.1
SRP54-208ENST00000555557 RAP2BP61225 183 aa8.21□□□□□ -1.1
SRP54-208ENST00000555557 SRSF4Q08170 494 aaKnown RBP8.21□□□□□ -1.1
SRP54-208ENST00000555557 IL15RAQ13261 267 aa8.21□□□□□ -1.1
SRP54-208ENST00000555557 RAB32Q13637 225 aa8.21□□□□□ -1.1
SRP54-208ENST00000555557 HNF4GQ14541 408 aa8.21□□□□□ -1.1
SRP54-208ENST00000555557 H2BFWTQ7Z2G1 175 aa8.21□□□□□ -1.1
SRP54-208ENST00000555557 OR11H4Q8NGC9 324 aa8.21□□□□□ -1.1
SRP54-208ENST00000555557 OR4C13Q8NGP0 309 aa8.21□□□□□ -1.1
SRP54-208ENST00000555557 C22orf15Q8WYQ4 148 aa8.21□□□□□ -1.1
SRP54-208ENST00000555557 LSM10Q969L4 123 aaKnown RBP8.21□□□□□ -1.1
SRP54-208ENST00000555557 RHOVQ96L33 236 aa8.21□□□□□ -1.1
SRP54-208ENST00000555557 NMES1Q9C002 83 aa8.21□□□□□ -1.1
SRP54-208ENST00000555557 MMP24Q9Y5R2 645 aa8.21□□□□□ -1.1
SRP54-208ENST00000555557 ACANP16112 2415 aa8.2□□□□□ -1.1
SRP54-208ENST00000555557 TRAV14DV4A0A0A6YYC5 116 aa8.2□□□□□ -1.1
SRP54-208ENST00000555557 VENTXO95231 258 aa8.2□□□□□ -1.1
SRP54-208ENST00000555557 IGKV1D-33P01593 117 aa8.2□□□□□ -1.1
SRP54-208ENST00000555557 IGKV1-33P01594 117 aa8.2□□□□□ -1.1
SRP54-208ENST00000555557 P0C879 139 aa8.2□□□□□ -1.1
SRP54-208ENST00000555557 RRASP10301 218 aa8.2□□□□□ -1.1
SRP54-208ENST00000555557 ERVK-16P61578 105 aa8.2□□□□□ -1.1
SRP54-208ENST00000555557 B2MP61769 119 aa8.2□□□□□ -1.1
SRP54-208ENST00000555557 TMEM177Q53S58 311 aa8.2□□□□□ -1.1
SRP54-208ENST00000555557 CXorf66Q5JRM2 361 aaPredicted RBP8.2□□□□□ -1.1
SRP54-208ENST00000555557 FAM120AOSQ5T036 256 aa8.2□□□□□ -1.1
SRP54-208ENST00000555557 DHRS7BQ6IAN0 325 aaPredicted RBP8.2□□□□□ -1.1
SRP54-208ENST00000555557 OR4A47Q6IF82 309 aa8.2□□□□□ -1.1
SRP54-208ENST00000555557 TMEM65Q6PI78 240 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms