RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 NSG2Q9Y328 171 aa8.65□□□□□ -1.03
TDP1-211ENST00000555178 TRAV3A0A0B4J244 114 aa8.64□□□□□ -1.03
TDP1-211ENST00000555178 OR2A4O95047 310 aa8.64□□□□□ -1.03
TDP1-211ENST00000555178 HLA-GP17693 338 aa8.64□□□□□ -1.03
TDP1-211ENST00000555178 SRPXP78539 464 aa8.64□□□□□ -1.03
TDP1-211ENST00000555178 DEFB112Q30KQ8 113 aa8.64□□□□□ -1.03
TDP1-211ENST00000555178 C11orf87Q6NUJ2 197 aa8.64□□□□□ -1.03
TDP1-211ENST00000555178 RNASE11Q8TAA1 199 aaKnown RBP8.64□□□□□ -1.03
TDP1-211ENST00000555178 ADTRPQ96IZ2 230 aa8.64□□□□□ -1.03
TDP1-211ENST00000555178 OR2A7Q96R45 310 aa8.64□□□□□ -1.03
TDP1-211ENST00000555178 INAFM1C9JVW0 142 aa8.64□□□□□ -1.03
TDP1-211ENST00000555178 B3GALNT1O75752 331 aa8.64□□□□□ -1.03
TDP1-211ENST00000555178 HPRT1P00492 218 aa8.64□□□□□ -1.03
TDP1-211ENST00000555178 APOA2P02652 100 aa8.64□□□□□ -1.03
TDP1-211ENST00000555178 OR9G9P0C7N8 305 aa8.64□□□□□ -1.03
TDP1-211ENST00000555178 P0C879 139 aa8.64□□□□□ -1.03
TDP1-211ENST00000555178 VDAC1P21796 283 aa8.64□□□□□ -1.03
TDP1-211ENST00000555178 NKX2-5P52952 324 aaPredicted RBP8.64□□□□□ -1.03
TDP1-211ENST00000555178 HNF4GQ14541 408 aa8.64□□□□□ -1.03
TDP1-211ENST00000555178 RTL8BQ17RB0 113 aa8.64□□□□□ -1.03
TDP1-211ENST00000555178 GSG1LQ6UXU4 331 aa8.64□□□□□ -1.03
TDP1-211ENST00000555178 OR2T35Q8NGX2 323 aa8.64□□□□□ -1.03
TDP1-211ENST00000555178 PIFOQ8TCI5 191 aa8.64□□□□□ -1.03
TDP1-211ENST00000555178 IL22RA2Q969J5 263 aa8.64□□□□□ -1.03
TDP1-211ENST00000555178 PLEKHA2Q9HB19 425 aa8.64□□□□□ -1.03
TDP1-211ENST00000555178 NUP50Q9UKX7 468 aa8.64□□□□□ -1.03
TDP1-211ENST00000555178 WASHC3Q9Y3C0 194 aa8.64□□□□□ -1.03
TDP1-211ENST00000555178 RBFOX2O43251 390 aaKnown RBP eCLIP8.63□□□□□ -1.03
TDP1-211ENST00000555178 IFNA21P01568 189 aa8.63□□□□□ -1.03
TDP1-211ENST00000555178 GIPP09681 153 aaPredicted RBP8.63□□□□□ -1.03
TDP1-211ENST00000555178 MYOD1P15172 320 aa8.63□□□□□ -1.03
TDP1-211ENST00000555178 CEACAM3P40198 252 aa8.63□□□□□ -1.03
TDP1-211ENST00000555178 OR2B8PP59922 312 aa8.63□□□□□ -1.03
TDP1-211ENST00000555178 MINOS1Q5TGZ0 78 aa8.63□□□□□ -1.03
TDP1-211ENST00000555178 FOXRED2Q8IWF2 684 aa8.63□□□□□ -1.03
TDP1-211ENST00000555178 DMBX1Q8NFW5 382 aa8.63□□□□□ -1.03
TDP1-211ENST00000555178 HARBI1Q96MB7 349 aa8.63□□□□□ -1.03
TDP1-211ENST00000555178 RANBP3Q9H6Z4 567 aaPredicted RBP8.63□□□□□ -1.03
TDP1-211ENST00000555178 TPSG1Q9NRR2 321 aa8.63□□□□□ -1.03
TDP1-211ENST00000555178 CACNG5Q9UF02 275 aa8.63□□□□□ -1.03
TDP1-211ENST00000555178 TMED3Q9Y3Q3 217 aa8.63□□□□□ -1.03
TDP1-211ENST00000555178 TBL2Q9Y4P3 447 aaKnown RBP8.63□□□□□ -1.03
TDP1-211ENST00000555178 MINOS1-NBL1R4GNA1 71 aa8.63□□□□□ -1.03
TDP1-211ENST00000555178 TRAV14DV4A0A0A6YYC5 116 aa8.62□□□□□ -1.03
TDP1-211ENST00000555178 SHOXO15266 292 aa8.62□□□□□ -1.03
TDP1-211ENST00000555178 KCNAB3O43448 404 aa8.62□□□□□ -1.03
TDP1-211ENST00000555178 VENTXO95231 258 aa8.62□□□□□ -1.03
TDP1-211ENST00000555178 SCGB1D2O95969 90 aa8.62□□□□□ -1.03
TDP1-211ENST00000555178 IGKV1D-33P01593 117 aa8.62□□□□□ -1.03
TDP1-211ENST00000555178 IGKV1-33P01594 117 aa8.62□□□□□ -1.03
TDP1-211ENST00000555178 SAA1P0DJI8 122 aaPredicted RBP8.62□□□□□ -1.03
TDP1-211ENST00000555178 KIR2DS2P43631 304 aa8.62□□□□□ -1.03
TDP1-211ENST00000555178 MIDNQ504T8 468 aa8.62□□□□□ -1.03
TDP1-211ENST00000555178 PDPNQ86YL7 162 aa8.62□□□□□ -1.03
TDP1-211ENST00000555178 TCTEX1D1Q8N7M0 179 aa8.62□□□□□ -1.03
TDP1-211ENST00000555178 ZBTB8BQ8NAP8 495 aaPredicted RBP8.62□□□□□ -1.03
TDP1-211ENST00000555178 OR11H4Q8NGC9 324 aa8.62□□□□□ -1.03
TDP1-211ENST00000555178 NANPQ8TBE9 248 aa8.62□□□□□ -1.03
TDP1-211ENST00000555178 CD300LFQ8TDQ1 290 aa8.62□□□□□ -1.03
TDP1-211ENST00000555178 PPP1R1CQ8WVI7 109 aa8.62□□□□□ -1.03
TDP1-211ENST00000555178 TAF15Q92804 592 aaKnown RBP eCLIP8.62□□□□□ -1.03
TDP1-211ENST00000555178 RHOVQ96L33 236 aa8.62□□□□□ -1.03
TDP1-211ENST00000555178 TMEM140Q9NV12 185 aa8.62□□□□□ -1.03
TDP1-211ENST00000555178 SETD2Q9BYW2 2564 aaPredicted RBP8.62□□□□□ -1.03
TDP1-211ENST00000555178 IGLV2-23P01705 113 aa8.62□□□□□ -1.03
TDP1-211ENST00000555178 SNRNP70P08621 437 aaKnown RBP8.62□□□□□ -1.03
TDP1-211ENST00000555178 NQO2P16083 231 aa8.62□□□□□ -1.03
TDP1-211ENST00000555178 RAB32Q13637 225 aa8.62□□□□□ -1.03
TDP1-211ENST00000555178 CXorf66Q5JRM2 361 aaPredicted RBP8.62□□□□□ -1.03
TDP1-211ENST00000555178 OR4A47Q6IF82 309 aa8.62□□□□□ -1.03
TDP1-211ENST00000555178 TCTE3Q8IZS6 198 aa8.62□□□□□ -1.03
TDP1-211ENST00000555178 FLYWCH2Q96CP2 140 aaKnown RBP8.62□□□□□ -1.03
TDP1-211ENST00000555178 RRNAD1Q96FB5 475 aaKnown RBP8.62□□□□□ -1.03
TDP1-211ENST00000555178 C2orf50Q96LR7 162 aa8.62□□□□□ -1.03
TDP1-211ENST00000555178 DUX5Q96PT3 197 aa8.62□□□□□ -1.03
TDP1-211ENST00000555178 MAGT1Q9H0U3 335 aa8.62□□□□□ -1.03
TDP1-211ENST00000555178 TNFRSF19Q9NS68 423 aa8.62□□□□□ -1.03
TDP1-211ENST00000555178 FAM212BQ9NTI7 297 aaPredicted RBP8.62□□□□□ -1.03
TDP1-211ENST00000555178 MMP24Q9Y5R2 645 aa8.62□□□□□ -1.03
TDP1-211ENST00000555178 TXNL1O43396 289 aa8.61□□□□□ -1.03
TDP1-211ENST00000555178 F2RL1P55085 397 aa8.61□□□□□ -1.03
TDP1-211ENST00000555178 S100A10P60903 97 aa8.61□□□□□ -1.03
TDP1-211ENST00000555178 RPS16P62249 146 aaKnown RBP8.61□□□□□ -1.03
TDP1-211ENST00000555178 IL15RAQ13261 267 aa8.61□□□□□ -1.03
TDP1-211ENST00000555178 HABP2Q14520 560 aaPredicted RBP8.61□□□□□ -1.03
TDP1-211ENST00000555178 TMEM177Q53S58 311 aa8.61□□□□□ -1.03
TDP1-211ENST00000555178 SPINK9Q5DT21 86 aa8.61□□□□□ -1.03
TDP1-211ENST00000555178 H2BFWTQ7Z2G1 175 aa8.61□□□□□ -1.03
TDP1-211ENST00000555178 OR8H3Q8N146 312 aa8.61□□□□□ -1.03
TDP1-211ENST00000555178 OR4D5Q8NGN0 318 aa8.61□□□□□ -1.03
TDP1-211ENST00000555178 OR4C13Q8NGP0 309 aa8.61□□□□□ -1.03
TDP1-211ENST00000555178 GRPEL2Q8TAA5 225 aa8.61□□□□□ -1.03
TDP1-211ENST00000555178 LSM10Q969L4 123 aaKnown RBP8.61□□□□□ -1.03
TDP1-211ENST00000555178 MALSU1Q96EH3 234 aa8.61□□□□□ -1.03
TDP1-211ENST00000555178 MS4A7Q9GZW8 240 aaPredicted RBP8.61□□□□□ -1.03
TDP1-211ENST00000555178 COMMD9Q9P000 198 aa8.61□□□□□ -1.03
TDP1-211ENST00000555178 DUXBA0A1W2PPF3 345 aa8.61□□□□□ -1.03
TDP1-211ENST00000555178 H0YIZ8 118 aa8.61□□□□□ -1.03
TDP1-211ENST00000555178 SLC25A17O43808 307 aa8.61□□□□□ -1.03
TDP1-211ENST00000555178 MBPP02686 304 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms