RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 RITA1Q96K30 269 aa13.1□□□□□ -0.31
SPTLC2-203ENST00000554901 TP53RKQ96S44 253 aa13.1□□□□□ -0.31
SPTLC2-203ENST00000554901 NUDT15Q9NV35 164 aa13.1□□□□□ -0.31
SPTLC2-203ENST00000554901 FAM181BA6NEQ2 426 aa13.09□□□□□ -0.31
SPTLC2-203ENST00000554901 ATG12O94817 140 aa13.09□□□□□ -0.31
SPTLC2-203ENST00000554901 IGLV2-23P01705 113 aa13.09□□□□□ -0.31
SPTLC2-203ENST00000554901 CRYBA1P05813 215 aa13.09□□□□□ -0.31
SPTLC2-203ENST00000554901 VSIG10L2P0DP72 767 aa13.09□□□□□ -0.31
SPTLC2-203ENST00000554901 LPAR6P43657 344 aa13.09□□□□□ -0.31
SPTLC2-203ENST00000554901 SUPT4H1P63272 117 aaKnown RBP13.09□□□□□ -0.31
SPTLC2-203ENST00000554901 SRPXP78539 464 aa13.09□□□□□ -0.31
SPTLC2-203ENST00000554901 PSG5Q15238 335 aa13.09□□□□□ -0.31
SPTLC2-203ENST00000554901 C5orf64Q2M2E5 130 aa13.09□□□□□ -0.31
SPTLC2-203ENST00000554901 PLET1Q6UQ28 207 aa13.09□□□□□ -0.31
SPTLC2-203ENST00000554901 Q8N9W7 124 aa13.09□□□□□ -0.31
SPTLC2-203ENST00000554901 TEX45Q8NA69 505 aa13.09□□□□□ -0.31
SPTLC2-203ENST00000554901 GLYATL2Q8WU03 294 aa13.09□□□□□ -0.31
SPTLC2-203ENST00000554901 RHOVQ96L33 236 aa13.09□□□□□ -0.31
SPTLC2-203ENST00000554901 FLVCR2Q9UPI3 526 aa13.09□□□□□ -0.31
SPTLC2-203ENST00000554901 PEX14O75381 377 aa13.08□□□□□ -0.31
SPTLC2-203ENST00000554901 S1PR2O95136 353 aa13.08□□□□□ -0.31
SPTLC2-203ENST00000554901 CDS2O95674 445 aa13.08□□□□□ -0.31
SPTLC2-203ENST00000554901 H2AFB2P0C5Z0 115 aa13.08□□□□□ -0.31
SPTLC2-203ENST00000554901 OR5AC1P0C628 307 aa13.08□□□□□ -0.31
SPTLC2-203ENST00000554901 ERVK-16P61578 105 aa13.08□□□□□ -0.31
SPTLC2-203ENST00000554901 IL22RA2Q969J5 263 aa13.08□□□□□ -0.31
SPTLC2-203ENST00000554901 RASL11BQ9BPW5 248 aa13.08□□□□□ -0.31
SPTLC2-203ENST00000554901 SRRM4A7MD48 611 aaKnown RBP13.08□□□□□ -0.32
SPTLC2-203ENST00000554901 CREBL2O60519 120 aaPredicted RBP13.08□□□□□ -0.32
SPTLC2-203ENST00000554901 AMY1AP04745 511 aa13.08□□□□□ -0.32
SPTLC2-203ENST00000554901 FGF2P09038 288 aa13.08□□□□□ -0.32
SPTLC2-203ENST00000554901 OR4E1P0C645 316 aa13.08□□□□□ -0.32
SPTLC2-203ENST00000554901 CNTFRP26992 372 aa13.08□□□□□ -0.32
SPTLC2-203ENST00000554901 TMEM187Q14656 261 aa13.08□□□□□ -0.32
SPTLC2-203ENST00000554901 TMEM56Q96MV1 263 aa13.08□□□□□ -0.32
SPTLC2-203ENST00000554901 PRSS22Q9GZN4 317 aa13.08□□□□□ -0.32
SPTLC2-203ENST00000554901 METTL1Q9UBP6 276 aaKnown RBP13.08□□□□□ -0.32
SPTLC2-203ENST00000554901 SIGLEC9Q9Y336 463 aa13.08□□□□□ -0.32
SPTLC2-203ENST00000554901 TMEM56-RWDD3S4R434 201 aa13.08□□□□□ -0.32
SPTLC2-203ENST00000554901 C2CD3Q4AC94 2353 aa13.07□□□□□ -0.32
SPTLC2-203ENST00000554901 ZFHX3Q15911 3703 aa13.07□□□□□ -0.32
SPTLC2-203ENST00000554901 TRAV6A0A075B6T7 132 aa13.07□□□□□ -0.32
SPTLC2-203ENST00000554901 MARCH11A6NNE9 402 aa13.07□□□□□ -0.32
SPTLC2-203ENST00000554901 SLC25A17O43808 307 aa13.07□□□□□ -0.32
SPTLC2-203ENST00000554901 TSPAN9O75954 239 aa13.07□□□□□ -0.32
SPTLC2-203ENST00000554901 SFT2D2O95562 160 aa13.07□□□□□ -0.32
SPTLC2-203ENST00000554901 HLA-DRB1P01911 266 aa13.07□□□□□ -0.32
SPTLC2-203ENST00000554901 CRYGBP07316 175 aa13.07□□□□□ -0.32
SPTLC2-203ENST00000554901 SAA1P0DJI8 122 aaPredicted RBP13.07□□□□□ -0.32
SPTLC2-203ENST00000554901 ANXA7P20073 488 aaKnown RBP13.07□□□□□ -0.32
SPTLC2-203ENST00000554901 VAMP1P23763 118 aa13.07□□□□□ -0.32
SPTLC2-203ENST00000554901 PPP1R1AQ13522 171 aa13.07□□□□□ -0.32
SPTLC2-203ENST00000554901 PLGLAQ15195 96 aa13.07□□□□□ -0.32
SPTLC2-203ENST00000554901 RGS21Q2M5E4 152 aa13.07□□□□□ -0.32
SPTLC2-203ENST00000554901 TRIM16LQ309B1 348 aa13.07□□□□□ -0.32
SPTLC2-203ENST00000554901 SP6Q3SY56 376 aa13.07□□□□□ -0.32
SPTLC2-203ENST00000554901 LIN54Q6MZP7 749 aa13.07□□□□□ -0.32
SPTLC2-203ENST00000554901 PPP1R27Q86WC6 154 aa13.07□□□□□ -0.32
SPTLC2-203ENST00000554901 PRIMA1Q86XR5 153 aa13.07□□□□□ -0.32
SPTLC2-203ENST00000554901 PUSL1Q8N0Z8 303 aaKnown RBP13.07□□□□□ -0.32
SPTLC2-203ENST00000554901 OR4A5Q8NH83 315 aa13.07□□□□□ -0.32
SPTLC2-203ENST00000554901 RBPMSQ93062 196 aaKnown RBP13.07□□□□□ -0.32
SPTLC2-203ENST00000554901 R3HDM4Q96D70 268 aa13.07□□□□□ -0.32
SPTLC2-203ENST00000554901 RBMXL1Q96E39 390 aaKnown RBP13.07□□□□□ -0.32
SPTLC2-203ENST00000554901 MARVELD1Q9BSK0 173 aa13.07□□□□□ -0.32
SPTLC2-203ENST00000554901 BET1LQ9NYM9 111 aa13.07□□□□□ -0.32
SPTLC2-203ENST00000554901 OR2A4O95047 310 aa13.06□□□□□ -0.32
SPTLC2-203ENST00000554901 NDUFA7O95182 113 aa13.06□□□□□ -0.32
SPTLC2-203ENST00000554901 DHRS2Q13268 280 aa13.06□□□□□ -0.32
SPTLC2-203ENST00000554901 LYG2Q86SG7 212 aa13.06□□□□□ -0.32
SPTLC2-203ENST00000554901 Q8N2B8 174 aa13.06□□□□□ -0.32
SPTLC2-203ENST00000554901 LRTM2Q8N967 370 aa13.06□□□□□ -0.32
SPTLC2-203ENST00000554901 DMBX1Q8NFW5 382 aa13.06□□□□□ -0.32
SPTLC2-203ENST00000554901 SEC22AQ96IW7 307 aa13.06□□□□□ -0.32
SPTLC2-203ENST00000554901 OR2A7Q96R45 310 aa13.06□□□□□ -0.32
SPTLC2-203ENST00000554901 FBXL15Q9H469 300 aa13.06□□□□□ -0.32
SPTLC2-203ENST00000554901 DUXBA0A1W2PPF3 345 aa13.05□□□□□ -0.32
SPTLC2-203ENST00000554901 C9orf170A2RU37 121 aa13.05□□□□□ -0.32
SPTLC2-203ENST00000554901 PRAF2O60831 178 aa13.05□□□□□ -0.32
SPTLC2-203ENST00000554901 KBTBD11O94819 623 aa13.05□□□□□ -0.32
SPTLC2-203ENST00000554901 DUS4LO95620 317 aaKnown RBP13.05□□□□□ -0.32
SPTLC2-203ENST00000554901 KRASP01116 189 aa13.05□□□□□ -0.32
SPTLC2-203ENST00000554901 IGKV1-39P01597 117 aa13.05□□□□□ -0.32
SPTLC2-203ENST00000554901 HLA-AP01891 365 aaKnown RBP13.05□□□□□ -0.32
SPTLC2-203ENST00000554901 IGKV1D-39P04432 117 aa13.05□□□□□ -0.32
SPTLC2-203ENST00000554901 IL5P05113 134 aa13.05□□□□□ -0.32
SPTLC2-203ENST00000554901 IL6RP08887 468 aaPredicted RBP13.05□□□□□ -0.32
SPTLC2-203ENST00000554901 C4orf46Q504U0 113 aa13.05□□□□□ -0.32
SPTLC2-203ENST00000554901 ZNF695Q8IW36 515 aa13.05□□□□□ -0.32
SPTLC2-203ENST00000554901 FAM219AQ8IW50 185 aa13.05□□□□□ -0.32
SPTLC2-203ENST00000554901 LGI3Q8N145 548 aa13.05□□□□□ -0.32
SPTLC2-203ENST00000554901 TMEM167AQ8TBQ9 72 aa13.05□□□□□ -0.32
SPTLC2-203ENST00000554901 CUBNO60494 3623 aa13.05□□□□□ -0.32
SPTLC2-203ENST00000554901 ATRQ13535 2644 aa13.04□□□□□ -0.32
SPTLC2-203ENST00000554901 INMT-MINDY4F8WBC2 141 aa13.04□□□□□ -0.32
SPTLC2-203ENST00000554901 KCNAB3O43448 404 aa13.04□□□□□ -0.32
SPTLC2-203ENST00000554901 RAB25P57735 213 aa13.04□□□□□ -0.32
SPTLC2-203ENST00000554901 BLCAPP62952 87 aa13.04□□□□□ -0.32
SPTLC2-203ENST00000554901 OR4A47Q6IF82 309 aa13.04□□□□□ -0.32
SPTLC2-203ENST00000554901 ZNF562Q6V9R5 426 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms