RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 IGHV1-2P23083 117 aa7.95□□□□□ -1.14
SYNE2-213ENST00000554805 CD1BP29016 333 aa7.95□□□□□ -1.14
SYNE2-213ENST00000554805 ERVK-16P61578 105 aa7.95□□□□□ -1.14
SYNE2-213ENST00000554805 JOSD1Q15040 202 aaPredicted RBP7.95□□□□□ -1.14
SYNE2-213ENST00000554805 VKORC1L1Q8N0U8 176 aa7.95□□□□□ -1.14
SYNE2-213ENST00000554805 C5orf30Q96GV9 206 aa7.95□□□□□ -1.14
SYNE2-213ENST00000554805 DDA1Q9BW61 102 aa7.95□□□□□ -1.14
SYNE2-213ENST00000554805 PARD6GQ9BYG4 376 aaPredicted RBP7.95□□□□□ -1.14
SYNE2-213ENST00000554805 SPAARA0A1B0GVQ0 90 aa7.95□□□□□ -1.14
SYNE2-213ENST00000554805 ZNF705FA8MVS1 300 aaPredicted RBP7.95□□□□□ -1.14
SYNE2-213ENST00000554805 C21orf140B9A014 251 aa7.95□□□□□ -1.14
SYNE2-213ENST00000554805 DVL1O14640 695 aa7.95□□□□□ -1.14
SYNE2-213ENST00000554805 ZNF705DP0CH99 300 aaPredicted RBP7.95□□□□□ -1.14
SYNE2-213ENST00000554805 ZNF705BP0CI00 300 aaPredicted RBP7.95□□□□□ -1.14
SYNE2-213ENST00000554805 NUBP1P53384 320 aa7.95□□□□□ -1.14
SYNE2-213ENST00000554805 GABRA6Q16445 453 aa7.95□□□□□ -1.14
SYNE2-213ENST00000554805 TGIF2LYQ8IUE0 185 aa7.95□□□□□ -1.14
SYNE2-213ENST00000554805 CXXC4Q9H2H0 198 aa7.95□□□□□ -1.14
SYNE2-213ENST00000554805 GP6Q9HCN6 339 aa7.95□□□□□ -1.14
SYNE2-213ENST00000554805 DUSP13Q9UII6 198 aa7.95□□□□□ -1.14
SYNE2-213ENST00000554805 LINC00473A8K010 186 aa7.95□□□□□ -1.14
SYNE2-213ENST00000554805 GZMBP10144 247 aa7.95□□□□□ -1.14
SYNE2-213ENST00000554805 RNFT1Q5M7Z0 435 aa7.95□□□□□ -1.14
SYNE2-213ENST00000554805 SLC35E4Q6ICL7 350 aa7.95□□□□□ -1.14
SYNE2-213ENST00000554805 LRRC29Q8WV35 223 aa7.95□□□□□ -1.14
SYNE2-213ENST00000554805 SSMEM1Q8WWF3 244 aa7.95□□□□□ -1.14
SYNE2-213ENST00000554805 COQ2Q96H96 371 aa7.95□□□□□ -1.14
SYNE2-213ENST00000554805 TMEM210A6NLX4 147 aa7.94□□□□□ -1.14
SYNE2-213ENST00000554805 F6UZH7 168 aa7.94□□□□□ -1.14
SYNE2-213ENST00000554805 WNT2P09544 360 aa7.94□□□□□ -1.14
SYNE2-213ENST00000554805 KITLGP21583 273 aa7.94□□□□□ -1.14
SYNE2-213ENST00000554805 SSX2Q16385 188 aa7.94□□□□□ -1.14
SYNE2-213ENST00000554805 PRSS8Q16651 343 aa7.94□□□□□ -1.14
SYNE2-213ENST00000554805 SMIM21Q3B7S5 101 aa7.94□□□□□ -1.14
SYNE2-213ENST00000554805 DEFB124Q8NES8 71 aa7.94□□□□□ -1.14
SYNE2-213ENST00000554805 DERL1Q9BUN8 251 aa7.94□□□□□ -1.14
SYNE2-213ENST00000554805 CHD8Q9HCK8 2581 aa7.94□□□□□ -1.14
SYNE2-213ENST00000554805 IGF2RP11717 2491 aa7.94□□□□□ -1.14
SYNE2-213ENST00000554805 IQCF6A8MYZ5 107 aa7.94□□□□□ -1.14
SYNE2-213ENST00000554805 C1QTNF9P0C862 333 aa7.94□□□□□ -1.14
SYNE2-213ENST00000554805 RPP30P78346 268 aaKnown RBP7.94□□□□□ -1.14
SYNE2-213ENST00000554805 MIC13Q5XKP0 118 aa7.94□□□□□ -1.14
SYNE2-213ENST00000554805 ACP7Q6ZNF0 438 aa7.94□□□□□ -1.14
SYNE2-213ENST00000554805 ARL6IP6Q8N6S5 226 aa7.94□□□□□ -1.14
SYNE2-213ENST00000554805 TMEM178AQ8NBL3 297 aa7.94□□□□□ -1.14
SYNE2-213ENST00000554805 TMEM170AQ8WVE7 144 aa7.94□□□□□ -1.14
SYNE2-213ENST00000554805 HSD17B10Q99714 261 aaKnown RBP7.94□□□□□ -1.14
SYNE2-213ENST00000554805 OR6C3Q9NZP0 311 aa7.94□□□□□ -1.14
SYNE2-213ENST00000554805 MLNRO43193 412 aa7.94□□□□□ -1.14
SYNE2-213ENST00000554805 OR9G9P0C7N8 305 aa7.94□□□□□ -1.14
SYNE2-213ENST00000554805 SRP14P37108 136 aaKnown RBP7.94□□□□□ -1.14
SYNE2-213ENST00000554805 THBS3P49746 956 aa7.94□□□□□ -1.14
SYNE2-213ENST00000554805 CNN1P51911 297 aaKnown RBP7.94□□□□□ -1.14
SYNE2-213ENST00000554805 OR5R1Q8NH85 324 aa7.94□□□□□ -1.14
SYNE2-213ENST00000554805 SGMS2Q8NHU3 365 aa7.94□□□□□ -1.14
SYNE2-213ENST00000554805 ACY3Q96HD9 319 aa7.94□□□□□ -1.14
SYNE2-213ENST00000554805 NCOR2Q9Y618 2525 aa7.94□□□□□ -1.14
SYNE2-213ENST00000554805 SNRPCP09234 159 aaKnown RBP7.93□□□□□ -1.14
SYNE2-213ENST00000554805 NDUFB7P17568 137 aa7.93□□□□□ -1.14
SYNE2-213ENST00000554805 CCL11P51671 97 aa7.93□□□□□ -1.14
SYNE2-213ENST00000554805 SOX8P57073 446 aa7.93□□□□□ -1.14
SYNE2-213ENST00000554805 SSTP61278 116 aa7.93□□□□□ -1.14
SYNE2-213ENST00000554805 GNB1P62873 340 aa7.93□□□□□ -1.14
SYNE2-213ENST00000554805 ABHD12Q8N2K0 398 aa7.93□□□□□ -1.14
SYNE2-213ENST00000554805 ZNF664Q8N3J9 261 aa7.93□□□□□ -1.14
SYNE2-213ENST00000554805 CISD2Q8N5K1 135 aaKnown RBP7.93□□□□□ -1.14
SYNE2-213ENST00000554805 OR2Z1Q8NG97 314 aa7.93□□□□□ -1.14
SYNE2-213ENST00000554805 GMPPAQ96IJ6 420 aaPredicted RBP7.93□□□□□ -1.14
SYNE2-213ENST00000554805 LURAP1Q96LR2 239 aa7.93□□□□□ -1.14
SYNE2-213ENST00000554805 ENY2Q9NPA8 101 aa7.93□□□□□ -1.14
SYNE2-213ENST00000554805 TNRC6AQ8NDV7 1962 aaKnown RBP7.93□□□□□ -1.14
SYNE2-213ENST00000554805 ABCA1O95477 2261 aa7.93□□□□□ -1.14
SYNE2-213ENST00000554805 C15orf62A8K5M9 175 aa7.93□□□□□ -1.14
SYNE2-213ENST00000554805 TDGF1P13385 188 aa7.93□□□□□ -1.14
SYNE2-213ENST00000554805 NPPCP23582 126 aa7.93□□□□□ -1.14
SYNE2-213ENST00000554805 IL3RAP26951 378 aa7.93□□□□□ -1.14
SYNE2-213ENST00000554805 CD82P27701 267 aa7.93□□□□□ -1.14
SYNE2-213ENST00000554805 GNB2P62879 340 aa7.93□□□□□ -1.14
SYNE2-213ENST00000554805 FOXF2Q12947 444 aa7.93□□□□□ -1.14
SYNE2-213ENST00000554805 ZNF718Q3SXZ3 478 aa7.93□□□□□ -1.14
SYNE2-213ENST00000554805 INO80CQ6PI98 192 aaPredicted RBP7.93□□□□□ -1.14
SYNE2-213ENST00000554805 Q6ZR03 302 aa7.93□□□□□ -1.14
SYNE2-213ENST00000554805 PYGO2Q9BRQ0 406 aa7.93□□□□□ -1.14
SYNE2-213ENST00000554805 IGHV3OR15-7A0A075B7D8 119 aa7.93□□□□□ -1.14
SYNE2-213ENST00000554805 A0A1W2PNU3 283 aaPredicted RBP7.93□□□□□ -1.14
SYNE2-213ENST00000554805 PMS2P5A8MQ11 134 aa7.93□□□□□ -1.14
SYNE2-213ENST00000554805 IFNL4K9M1U5 179 aa7.93□□□□□ -1.14
SYNE2-213ENST00000554805 PDE6DO43924 150 aa7.93□□□□□ -1.14
SYNE2-213ENST00000554805 ARL14EPLP0DKL9 152 aa7.93□□□□□ -1.14
SYNE2-213ENST00000554805 BRWD1-AS2P59051 145 aa7.93□□□□□ -1.14
SYNE2-213ENST00000554805 RPL39P5Q59GN2 51 aa7.93□□□□□ -1.14
SYNE2-213ENST00000554805 PEAR1Q5VY43 1037 aaPredicted RBP7.93□□□□□ -1.14
SYNE2-213ENST00000554805 VHLLQ6RSH7 139 aa7.93□□□□□ -1.14
SYNE2-213ENST00000554805 CENPVQ7Z7K6 275 aaPredicted RBP7.93□□□□□ -1.14
SYNE2-213ENST00000554805 S1PR3Q99500 378 aa7.93□□□□□ -1.14
SYNE2-213ENST00000554805 ZDHHC11Q9H8X9 412 aa7.93□□□□□ -1.14
SYNE2-213ENST00000554805 A0A1B0GUS0 222 aa7.92□□□□□ -1.14
SYNE2-213ENST00000554805 AQP7O14520 342 aa7.92□□□□□ -1.14
SYNE2-213ENST00000554805 VENTXO95231 258 aa7.92□□□□□ -1.14
SYNE2-213ENST00000554805 GCGP01275 180 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms