RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 LYPLAL1Q5VWZ2 237 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 STUMQ69YW2 141 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 FAM72DQ6L9T8 149 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 ZNF343Q6P1L6 599 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 ENPP7Q6UWV6 458 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 C12orf54Q6X4T0 127 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 Q6ZSR9 355 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 TMPRSS11BQ86T26 416 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 FAM72BQ86X60 149 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 FAM219AQ8IW50 185 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 ZNF595Q8IYB9 648 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 C1orf174Q8IYL3 243 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 OSR2Q8N2R0 312 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 NPWQ8N729 165 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-227ENST00000554491 OR52I1Q8NGK6 324 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 OR52I2Q8NH67 350 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 STAG3L4Q8TBR4 150 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 LRRC61Q9BV99 259 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 WDR13Q9H1Z4 485 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 KCNK15Q9H427 330 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 NPVFQ9HCQ7 196 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 SDR39U1Q9NRG7 319 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-227ENST00000554491 VDAC3Q9Y277 283 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 APCP25054 2843 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 TRBV5-3A0A0A0MS03 114 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 TINCRA0A1B0GVN0 87 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 A0A1W2PRF3 423 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 A0A1W2PRM7 423 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 TMEM89A2RUT3 159 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 ASPDHA6ND91 283 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 ZNF860A6NHJ4 632 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 MSGN1A6NI15 193 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 FAM90A20PA6NIJ5 464 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 CD300LBA8K4G0 201 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 FOXI3A8MTJ6 420 aaPredicted RBP3.67□□□□□ -1.82
ATXN3-227ENST00000554491 J3KT08 172 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 K7EP34 96 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 M0R1X1 148 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 SIRPB1O00241 398 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 GAPDHSO14556 408 aaPredicted RBP3.67□□□□□ -1.82
ATXN3-227ENST00000554491 CDC42EP2O14613 210 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 GEMIN2O14893 280 aaKnown RBP3.67□□□□□ -1.82
ATXN3-227ENST00000554491 PLPP2O43688 288 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 ZG16O60844 167 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 GCM2O75603 506 aaPredicted RBP3.67□□□□□ -1.82
ATXN3-227ENST00000554491 NDUFB6O95139 128 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 MOSP00540 346 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 CGAP01215 116 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 IGLV3-19P01714 112 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 KLK1P06870 262 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 ZNF728P0DKX0 622 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 CT45A6P0DMU7 189 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 CT45A5P0DMU8 189 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 CT45A7P0DMV0 189 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 ATP1B2P14415 290 aaPredicted RBP3.67□□□□□ -1.82
ATXN3-227ENST00000554491 MMP9P14780 707 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 HMGA1P17096 107 aaKnown RBP3.67□□□□□ -1.82
ATXN3-227ENST00000554491 PGCP20142 388 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 SRIP30626 198 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 NTSP30990 170 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 GLRXP35754 106 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 DAPP51397 102 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 FUT6P51993 359 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 H2BFSP57053 126 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 FAM3BP58499 235 aaPredicted RBP3.67□□□□□ -1.82
ATXN3-227ENST00000554491 TPPP2P59282 170 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 UFM1P61960 85 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 RAE1P78406 368 aaKnown RBP3.67□□□□□ -1.82
ATXN3-227ENST00000554491 PSG4Q00888 419 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 PNRC1Q12796 327 aaPredicted RBP3.67□□□□□ -1.82
ATXN3-227ENST00000554491 EXOSC7Q15024 291 aaKnown RBP3.67□□□□□ -1.82
ATXN3-227ENST00000554491 ADIRFQ15847 76 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 TBC1D28Q2M2D7 210 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 LRRC75BQ2VPJ9 315 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 CT45A1Q5HYN5 189 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 FHL5Q5TD97 284 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 GLIPR1L1Q6UWM5 242 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 PPP1R27Q86WC6 154 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 CDC20BQ86Y33 519 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 APRG1Q8IVJ8 170 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 ZNF547Q8IVP9 402 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 ZNF611Q8N823 705 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 ZDHHC22Q8N966 263 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 SUMF2Q8NBJ7 301 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 ADAD2Q8NCV1 583 aaKnown RBP3.67□□□□□ -1.82
ATXN3-227ENST00000554491 OR2T33Q8NG76 320 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 OR6T1Q8NGN1 323 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 OR52P1PQ8NH57 321 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 CT45A3Q8NHU0 189 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 SAP25Q8TEE9 199 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 NDRG1Q92597 394 aaKnown RBP3.67□□□□□ -1.82
ATXN3-227ENST00000554491 RPEQ96AT9 228 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 TVP23CQ96ET8 276 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 SDSLQ96GA7 329 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 SGK494Q96LW2 274 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 RHNO1Q9BSD3 238 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 TMEM204Q9BSN7 226 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 ABHD6Q9BV23 337 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 POLR2J2Q9GZM3 115 aaKnown RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms