RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 TNFSF12O43508 249 aa13□□□□□ -0.33
ACTN1-209ENST00000553659 NDUFA2O43678 99 aa13□□□□□ -0.33
ACTN1-209ENST00000553659 JTBO76095 146 aa13□□□□□ -0.33
ACTN1-209ENST00000553659 IGLV2-14P01704 120 aa13□□□□□ -0.33
ACTN1-209ENST00000553659 RAB7AP51149 207 aa13□□□□□ -0.33
ACTN1-209ENST00000553659 KRTAP10-3P60369 221 aa13□□□□□ -0.33
ACTN1-209ENST00000553659 ZNF788Q6ZQV5 615 aa13□□□□□ -0.33
ACTN1-209ENST00000553659 C5orf24Q7Z6I8 188 aa13□□□□□ -0.33
ACTN1-209ENST00000553659 OR52L2PQ8NGH6 319 aa13□□□□□ -0.33
ACTN1-209ENST00000553659 OR51H1Q8NH63 302 aa13□□□□□ -0.33
ACTN1-209ENST00000553659 RNASE11Q8TAA1 199 aaKnown RBP13□□□□□ -0.33
ACTN1-209ENST00000553659 CD300LFQ8TDQ1 290 aa13□□□□□ -0.33
ACTN1-209ENST00000553659 RRNAD1Q96FB5 475 aaKnown RBP13□□□□□ -0.33
ACTN1-209ENST00000553659 HSD17B10Q99714 261 aaKnown RBP13□□□□□ -0.33
ACTN1-209ENST00000553659 SLC25A31Q9H0C2 315 aa13□□□□□ -0.33
ACTN1-209ENST00000553659 GAB2Q9UQC2 676 aa13□□□□□ -0.33
ACTN1-209ENST00000553659 RNF114Q9Y508 228 aa13□□□□□ -0.33
ACTN1-209ENST00000553659 SESN1Q9Y6P5 492 aa13□□□□□ -0.33
ACTN1-209ENST00000553659 VWFP04275 2813 aa13□□□□□ -0.33
ACTN1-209ENST00000553659 IGHV3OR15-7A0A075B7D8 119 aa12.99□□□□□ -0.33
ACTN1-209ENST00000553659 IGHV1-69DA0A0B4J2H0 117 aa12.99□□□□□ -0.33
ACTN1-209ENST00000553659 LEUTXA8MZ59 168 aa12.99□□□□□ -0.33
ACTN1-209ENST00000553659 WRBO00258 174 aa12.99□□□□□ -0.33
ACTN1-209ENST00000553659 IGHV1-69P01742 117 aa12.99□□□□□ -0.33
ACTN1-209ENST00000553659 NMBP08949 121 aa12.99□□□□□ -0.33
ACTN1-209ENST00000553659 VAMP2P63027 116 aa12.99□□□□□ -0.33
ACTN1-209ENST00000553659 HOXA4Q00056 320 aaPredicted RBP12.99□□□□□ -0.33
ACTN1-209ENST00000553659 COMMD7Q86VX2 200 aa12.99□□□□□ -0.33
ACTN1-209ENST00000553659 FOXRED2Q8IWF2 684 aa12.99□□□□□ -0.33
ACTN1-209ENST00000553659 OR10A7Q8NGE5 316 aa12.99□□□□□ -0.33
ACTN1-209ENST00000553659 CORO2AQ92828 525 aa12.99□□□□□ -0.33
ACTN1-209ENST00000553659 GAFA1Q96PS6 74 aa12.99□□□□□ -0.33
ACTN1-209ENST00000553659 SIRPDQ9H106 197 aa12.99□□□□□ -0.33
ACTN1-209ENST00000553659 OR2D2Q9H210 308 aa12.99□□□□□ -0.33
ACTN1-209ENST00000553659 RCL1Q9Y2P8 373 aaKnown RBP12.99□□□□□ -0.33
ACTN1-209ENST00000553659 BORCS7-ASMTA0A0B4J1R7 106 aa12.98□□□□□ -0.33
ACTN1-209ENST00000553659 MSGN1A6NI15 193 aa12.98□□□□□ -0.33
ACTN1-209ENST00000553659 ZNF729A6NN14 1252 aaPredicted RBP12.98□□□□□ -0.33
ACTN1-209ENST00000553659 SSTR5P35346 364 aa12.98□□□□□ -0.33
ACTN1-209ENST00000553659 EDDM3BP56851 147 aa12.98□□□□□ -0.33
ACTN1-209ENST00000553659 ID3Q02535 119 aa12.98□□□□□ -0.33
ACTN1-209ENST00000553659 MEF2CQ06413 473 aaPredicted RBP12.98□□□□□ -0.33
ACTN1-209ENST00000553659 BAXQ07812 192 aa12.98□□□□□ -0.33
ACTN1-209ENST00000553659 OR52M1Q8NGK5 317 aa12.98□□□□□ -0.33
ACTN1-209ENST00000553659 LINC01006Q8NI28 216 aa12.98□□□□□ -0.33
ACTN1-209ENST00000553659 CYTL1Q9NRR1 136 aa12.98□□□□□ -0.33
ACTN1-209ENST00000553659 COA4Q9NYJ1 87 aa12.98□□□□□ -0.33
ACTN1-209ENST00000553659 CALYQ9NYX4 217 aa12.98□□□□□ -0.33
ACTN1-209ENST00000553659 GNG12Q9UBI6 72 aa12.98□□□□□ -0.33
ACTN1-209ENST00000553659 KBTBD11-OT1A0A1B0GTJ5 212 aa12.97□□□□□ -0.33
ACTN1-209ENST00000553659 hADV38S2A0JD32 116 aa12.97□□□□□ -0.33
ACTN1-209ENST00000553659 NUDT19A8MXV4 375 aa12.97□□□□□ -0.33
ACTN1-209ENST00000553659 FAM90A26D6RGX4 464 aa12.97□□□□□ -0.33
ACTN1-209ENST00000553659 KIR2DS2P43631 304 aa12.97□□□□□ -0.33
ACTN1-209ENST00000553659 IER3P46695 156 aa12.97□□□□□ -0.33
ACTN1-209ENST00000553659 ARHGDIBP52566 201 aa12.97□□□□□ -0.33
ACTN1-209ENST00000553659 AKR1C2P52895 323 aa12.97□□□□□ -0.33
ACTN1-209ENST00000553659 EIF4EBP1Q13541 118 aaPredicted RBP12.97□□□□□ -0.33
ACTN1-209ENST00000553659 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.97□□□□□ -0.33
ACTN1-209ENST00000553659 ZNRF1Q8ND25 227 aa12.97□□□□□ -0.33
ACTN1-209ENST00000553659 RNF141Q8WVD5 230 aa12.97□□□□□ -0.33
ACTN1-209ENST00000553659 LHX4Q969G2 390 aa12.97□□□□□ -0.33
ACTN1-209ENST00000553659 RAB40CQ96S21 281 aa12.97□□□□□ -0.33
ACTN1-209ENST00000553659 LINC00574Q9H8X3 128 aa12.97□□□□□ -0.33
ACTN1-209ENST00000553659 TAS2R3Q9NYW6 316 aa12.97□□□□□ -0.33
ACTN1-209ENST00000553659 PITX3O75364 302 aa12.96□□□□□ -0.33
ACTN1-209ENST00000553659 CGB3P0DN86 165 aa12.96□□□□□ -0.33
ACTN1-209ENST00000553659 CGB7P0DN87 165 aa12.96□□□□□ -0.33
ACTN1-209ENST00000553659 PPP1CCP36873 323 aaKnown RBP12.96□□□□□ -0.33
ACTN1-209ENST00000553659 GPR12P47775 334 aa12.96□□□□□ -0.33
ACTN1-209ENST00000553659 PROK1P58294 105 aa12.96□□□□□ -0.33
ACTN1-209ENST00000553659 ARF6P62330 175 aa12.96□□□□□ -0.33
ACTN1-209ENST00000553659 Q3ZCU0 254 aa12.96□□□□□ -0.33
ACTN1-209ENST00000553659 OR2C3Q8N628 320 aa12.96□□□□□ -0.33
ACTN1-209ENST00000553659 TPRX1Q8N7U7 411 aa12.96□□□□□ -0.33
ACTN1-209ENST00000553659 UBAC2Q8NBM4 344 aa12.96□□□□□ -0.33
ACTN1-209ENST00000553659 DMBX1Q8NFW5 382 aa12.96□□□□□ -0.33
ACTN1-209ENST00000553659 CITED4Q96RK1 184 aa12.96□□□□□ -0.33
ACTN1-209ENST00000553659 FBXL17Q9UF56 701 aa12.96□□□□□ -0.33
ACTN1-209ENST00000553659 CACFD1Q9UGQ2 172 aa12.96□□□□□ -0.33
ACTN1-209ENST00000553659 A0A0U1RQK1 487 aa12.95□□□□□ -0.34
ACTN1-209ENST00000553659 DVL1O14640 695 aa12.95□□□□□ -0.34
ACTN1-209ENST00000553659 MED6O75586 246 aa12.95□□□□□ -0.34
ACTN1-209ENST00000553659 FCN3O75636 299 aa12.95□□□□□ -0.34
ACTN1-209ENST00000553659 LY86O95711 162 aa12.95□□□□□ -0.34
ACTN1-209ENST00000553659 IGHV4-59P01825 116 aa12.95□□□□□ -0.34
ACTN1-209ENST00000553659 GYPAP02724 150 aa12.95□□□□□ -0.34
ACTN1-209ENST00000553659 RPL23AP62750 156 aaKnown RBP12.95□□□□□ -0.34
ACTN1-209ENST00000553659 ZNF266Q14584 549 aa12.95□□□□□ -0.34
ACTN1-209ENST00000553659 MORN2Q502X0 79 aa12.95□□□□□ -0.34
ACTN1-209ENST00000553659 HSD17B13Q7Z5P4 300 aaPredicted RBP12.95□□□□□ -0.34
ACTN1-209ENST00000553659 EIF4E3Q8N5X7 224 aaKnown RBP12.95□□□□□ -0.34
ACTN1-209ENST00000553659 UBALD1Q8TB05 177 aa12.95□□□□□ -0.34
ACTN1-209ENST00000553659 TCTEX1D2Q8WW35 142 aa12.95□□□□□ -0.34
ACTN1-209ENST00000553659 GPR146Q96CH1 333 aa12.95□□□□□ -0.34
ACTN1-209ENST00000553659 PARP12Q9H0J9 701 aaKnown RBP12.95□□□□□ -0.34
ACTN1-209ENST00000553659 GAL3ST2Q9H3Q3 398 aa12.95□□□□□ -0.34
ACTN1-209ENST00000553659 C11orf1Q9H5F2 150 aa12.95□□□□□ -0.34
ACTN1-209ENST00000553659 LYRM2Q9NU23 88 aaPredicted RBP12.95□□□□□ -0.34
ACTN1-209ENST00000553659 GFOD1Q9NXC2 390 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms