RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 Q96MF0 132 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 TMEM56Q96MV1 263 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 SPIN2AQ99865 258 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 RNF5Q99942 180 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 SPIN2BQ9BPZ2 258 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 SEC22CQ9BRL7 303 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 PCGF1Q9BSM1 259 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 PDCD10Q9BUL8 212 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 TMEM222Q9H0R3 208 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 RAB18Q9NP72 206 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 COMMD9Q9P000 198 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 TMEM56-RWDD3S4R434 201 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 AKAP6Q13023 2319 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 ARHGAP32A7KAX9 2087 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 ITPR1Q14643 2758 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 WNK2Q9Y3S1 2297 aa4.06□□□□□ -1.76
VTI1B-202ENST00000553619 A0A1B0GU03 582 aa4.06□□□□□ -1.76
VTI1B-202ENST00000553619 A0A1B0GVG6 124 aa4.06□□□□□ -1.76
VTI1B-202ENST00000553619 C13orf42A0A1B0GVH6 325 aa4.06□□□□□ -1.76
VTI1B-202ENST00000553619 A0A1W2PPE3 182 aa4.06□□□□□ -1.76
VTI1B-202ENST00000553619 TNFSF12O43508 249 aa4.06□□□□□ -1.76
VTI1B-202ENST00000553619 IGLV1-47P01700 117 aa4.06□□□□□ -1.76
VTI1B-202ENST00000553619 IGHV3-7P01780 117 aa4.06□□□□□ -1.76
VTI1B-202ENST00000553619 SULT1A3P0DMM9 295 aa4.06□□□□□ -1.76
VTI1B-202ENST00000553619 SULT1A4P0DMN0 295 aa4.06□□□□□ -1.76
VTI1B-202ENST00000553619 SLC25A6P12236 298 aa4.06□□□□□ -1.76
VTI1B-202ENST00000553619 NQO2P16083 231 aa4.06□□□□□ -1.76
VTI1B-202ENST00000553619 VDAC1P21796 283 aa4.06□□□□□ -1.76
VTI1B-202ENST00000553619 BRS3P32247 399 aa4.06□□□□□ -1.76
VTI1B-202ENST00000553619 LGALS7P47929 136 aa4.06□□□□□ -1.76
VTI1B-202ENST00000553619 RAB13P51153 203 aa4.06□□□□□ -1.76
VTI1B-202ENST00000553619 ZNF137PP52743 207 aa4.06□□□□□ -1.76
VTI1B-202ENST00000553619 RAP2BP61225 183 aa4.06□□□□□ -1.76
VTI1B-202ENST00000553619 SSTP61278 116 aa4.06□□□□□ -1.76
VTI1B-202ENST00000553619 ERVK-16P61578 105 aa4.06□□□□□ -1.76
VTI1B-202ENST00000553619 RPS16P62249 146 aaKnown RBP4.06□□□□□ -1.76
VTI1B-202ENST00000553619 SUPT4H1P63272 117 aaKnown RBP4.06□□□□□ -1.76
VTI1B-202ENST00000553619 ZNF816Q0VGE8 651 aaPredicted RBP4.06□□□□□ -1.76
VTI1B-202ENST00000553619 SP6Q3SY56 376 aa4.06□□□□□ -1.76
VTI1B-202ENST00000553619 MIDNQ504T8 468 aa4.06□□□□□ -1.76
VTI1B-202ENST00000553619 GPR157Q5UAW9 335 aa4.06□□□□□ -1.76
VTI1B-202ENST00000553619 TMEM268Q5VZI3 342 aa4.06□□□□□ -1.76
VTI1B-202ENST00000553619 HIST2H2BCQ6DN03 193 aa4.06□□□□□ -1.76
VTI1B-202ENST00000553619 FAM122CQ6P4D5 195 aa4.06□□□□□ -1.76
VTI1B-202ENST00000553619 Q6YL49 198 aa4.06□□□□□ -1.76
VTI1B-202ENST00000553619 ZNF833PQ6ZTB9 187 aa4.06□□□□□ -1.76
VTI1B-202ENST00000553619 SELENOHQ8IZQ5 122 aaKnown RBP4.06□□□□□ -1.76
VTI1B-202ENST00000553619 SPAG16Q8N0X2 631 aa4.06□□□□□ -1.76
VTI1B-202ENST00000553619 OR8H3Q8N146 312 aa4.06□□□□□ -1.76
VTI1B-202ENST00000553619 Q8N7P7 452 aa4.06□□□□□ -1.76
VTI1B-202ENST00000553619 OR52B4Q8NGK2 314 aa4.06□□□□□ -1.76
VTI1B-202ENST00000553619 OR4C13Q8NGP0 309 aa4.06□□□□□ -1.76
VTI1B-202ENST00000553619 OR51H1Q8NH63 302 aa4.06□□□□□ -1.76
VTI1B-202ENST00000553619 OR4S2Q8NH73 311 aa4.06□□□□□ -1.76
VTI1B-202ENST00000553619 LEAP2Q969E1 77 aa4.06□□□□□ -1.76
VTI1B-202ENST00000553619 LSM10Q969L4 123 aaKnown RBP4.06□□□□□ -1.76
VTI1B-202ENST00000553619 FLYWCH2Q96CP2 140 aaKnown RBP4.06□□□□□ -1.76
VTI1B-202ENST00000553619 C2orf50Q96LR7 162 aa4.06□□□□□ -1.76
VTI1B-202ENST00000553619 NMES1Q9C002 83 aa4.06□□□□□ -1.76
VTI1B-202ENST00000553619 ZNF436Q9C0F3 470 aaPredicted RBP4.06□□□□□ -1.76
VTI1B-202ENST00000553619 SIRPDQ9H106 197 aa4.06□□□□□ -1.76
VTI1B-202ENST00000553619 IFI27L2Q9H2X8 130 aa4.06□□□□□ -1.76
VTI1B-202ENST00000553619 RANBP3Q9H6Z4 567 aaPredicted RBP4.06□□□□□ -1.76
VTI1B-202ENST00000553619 PLEKHA2Q9HB19 425 aa4.06□□□□□ -1.76
VTI1B-202ENST00000553619 SIRT7Q9NRC8 400 aa4.06□□□□□ -1.76
VTI1B-202ENST00000553619 MMP26Q9NRE1 261 aa4.06□□□□□ -1.76
VTI1B-202ENST00000553619 SLC35D1Q9NTN3 355 aa4.06□□□□□ -1.76
VTI1B-202ENST00000553619 HIF1ANQ9NWT6 349 aa4.06□□□□□ -1.76
VTI1B-202ENST00000553619 MGAT4CQ9UBM8 478 aa4.06□□□□□ -1.76
VTI1B-202ENST00000553619 MYO18BQ8IUG5 2567 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 SAA2-SAA4A0A096LPE2 208 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 FAM90A9PA6NNJ1 464 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 H7C2Y5 167 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 GOSR2O14653 212 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 SLC31A2O15432 143 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 FCGR3BO75015 233 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 MED6O75586 246 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 OR2A4O95047 310 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 IGLV2-14P01704 120 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 HOXB5P09067 269 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 GIPP09681 153 aaPredicted RBP4.05□□□□□ -1.76
VTI1B-202ENST00000553619 PET100P0DJ07 73 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 SAA2P0DJI9 122 aaPredicted RBP4.05□□□□□ -1.76
VTI1B-202ENST00000553619 CT45A6P0DMU7 189 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 CT45A5P0DMU8 189 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 CT45A7P0DMV0 189 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 IGHV4-31P0DP07 118 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 MMP9P14780 707 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 PVALBP20472 110 aaPredicted RBP4.05□□□□□ -1.76
VTI1B-202ENST00000553619 COX7A1P24310 79 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 CD1BP29016 333 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 NUP62P37198 522 aaPredicted RBP4.05□□□□□ -1.76
VTI1B-202ENST00000553619 AKR1C2P52895 323 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 PTTG1IPP53801 180 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 SRSF4Q08170 494 aaKnown RBP4.05□□□□□ -1.76
VTI1B-202ENST00000553619 EIF4EBP1Q13541 118 aaPredicted RBP4.05□□□□□ -1.76
VTI1B-202ENST00000553619 SMCO1Q147U7 214 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 FCN2Q15485 313 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 TMEM249Q2WGJ8 235 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 BEAN1Q3B7T3 259 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms