RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 HSPB11Q9Y547 144 aa11.09□□□□□ -0.63
APEX1-205ENST00000553555 ZANQ9Y493 2812 aa11.09□□□□□ -0.63
APEX1-205ENST00000553555 SRRM4A7MD48 611 aaKnown RBP11.09□□□□□ -0.63
APEX1-205ENST00000553555 NPFFO15130 113 aa11.09□□□□□ -0.63
APEX1-205ENST00000553555 TSC22D2O75157 780 aa11.09□□□□□ -0.63
APEX1-205ENST00000553555 POU2AF1Q16633 256 aa11.09□□□□□ -0.63
APEX1-205ENST00000553555 DYNAPQ8N1N2 210 aa11.09□□□□□ -0.63
APEX1-205ENST00000553555 DMBX1Q8NFW5 382 aa11.09□□□□□ -0.63
APEX1-205ENST00000553555 FLYWCH2Q96CP2 140 aaKnown RBP11.09□□□□□ -0.63
APEX1-205ENST00000553555 MALSU1Q96EH3 234 aa11.09□□□□□ -0.63
APEX1-205ENST00000553555 COA4Q9NYJ1 87 aa11.09□□□□□ -0.63
APEX1-205ENST00000553555 ITGB1BP2Q9UKP3 347 aa11.09□□□□□ -0.63
APEX1-205ENST00000553555 IGHV3-72A0A0B4J1Y9 119 aa11.08□□□□□ -0.64
APEX1-205ENST00000553555 IGHV1-69DA0A0B4J2H0 117 aa11.08□□□□□ -0.64
APEX1-205ENST00000553555 FAM90A9PA6NNJ1 464 aa11.08□□□□□ -0.64
APEX1-205ENST00000553555 J3QLI3 93 aa11.08□□□□□ -0.64
APEX1-205ENST00000553555 SHOXO15266 292 aa11.08□□□□□ -0.64
APEX1-205ENST00000553555 AVPP01185 164 aa11.08□□□□□ -0.64
APEX1-205ENST00000553555 IGHV1-69P01742 117 aa11.08□□□□□ -0.64
APEX1-205ENST00000553555 MBPP02686 304 aaPredicted RBP11.08□□□□□ -0.64
APEX1-205ENST00000553555 SLC25A4P12235 298 aa11.08□□□□□ -0.64
APEX1-205ENST00000553555 RAB13P51153 203 aa11.08□□□□□ -0.64
APEX1-205ENST00000553555 ARHGDIBP52566 201 aa11.08□□□□□ -0.64
APEX1-205ENST00000553555 ERVK-16P61578 105 aa11.08□□□□□ -0.64
APEX1-205ENST00000553555 ID3Q02535 119 aa11.08□□□□□ -0.64
APEX1-205ENST00000553555 SSX2Q16385 188 aa11.08□□□□□ -0.64
APEX1-205ENST00000553555 C11orf87Q6NUJ2 197 aa11.08□□□□□ -0.64
APEX1-205ENST00000553555 SSX9Q7RTT3 188 aa11.08□□□□□ -0.64
APEX1-205ENST00000553555 VKORC1L1Q8N0U8 176 aa11.08□□□□□ -0.64
APEX1-205ENST00000553555 OR4C13Q8NGP0 309 aa11.08□□□□□ -0.64
APEX1-205ENST00000553555 OR1S1Q8NH92 325 aa11.08□□□□□ -0.64
APEX1-205ENST00000553555 C17orf50Q8WW18 174 aa11.08□□□□□ -0.64
APEX1-205ENST00000553555 RHOVQ96L33 236 aa11.08□□□□□ -0.64
APEX1-205ENST00000553555 AIFM2Q9BRQ8 373 aa11.08□□□□□ -0.64
APEX1-205ENST00000553555 RNF126Q9BV68 326 aa11.08□□□□□ -0.64
APEX1-205ENST00000553555 TEX15Q9BXT5 2789 aa11.08□□□□□ -0.64
APEX1-205ENST00000553555 H0YIZ8 118 aa11.07□□□□□ -0.64
APEX1-205ENST00000553555 TIMM23O14925 209 aa11.07□□□□□ -0.64
APEX1-205ENST00000553555 SCGB1D2O95969 90 aa11.07□□□□□ -0.64
APEX1-205ENST00000553555 IL6RP08887 468 aaPredicted RBP11.07□□□□□ -0.64
APEX1-205ENST00000553555 OR9G9P0C7N8 305 aa11.07□□□□□ -0.64
APEX1-205ENST00000553555 CD1BP29016 333 aa11.07□□□□□ -0.64
APEX1-205ENST00000553555 SAA4P35542 130 aa11.07□□□□□ -0.64
APEX1-205ENST00000553555 RPS16P62249 146 aaKnown RBP11.07□□□□□ -0.64
APEX1-205ENST00000553555 HABP2Q14520 560 aaPredicted RBP11.07□□□□□ -0.64
APEX1-205ENST00000553555 CXorf66Q5JRM2 361 aaPredicted RBP11.07□□□□□ -0.64
APEX1-205ENST00000553555 CYB5R2Q6BCY4 276 aa11.07□□□□□ -0.64
APEX1-205ENST00000553555 LAMTOR1Q6IAA8 161 aa11.07□□□□□ -0.64
APEX1-205ENST00000553555 CCDC144NLQ6NUI1 221 aa11.07□□□□□ -0.64
APEX1-205ENST00000553555 CIARTQ8N365 385 aaPredicted RBP11.07□□□□□ -0.64
APEX1-205ENST00000553555 C9orf62Q8N4C0 152 aa11.07□□□□□ -0.64
APEX1-205ENST00000553555 PIP4P2Q8N4L2 257 aa11.07□□□□□ -0.64
APEX1-205ENST00000553555 THAP6Q8TBB0 222 aa11.07□□□□□ -0.64
APEX1-205ENST00000553555 CFHR4Q92496 578 aa11.07□□□□□ -0.64
APEX1-205ENST00000553555 MS4A7Q9GZW8 240 aaPredicted RBP11.07□□□□□ -0.64
APEX1-205ENST00000553555 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.07□□□□□ -0.64
APEX1-205ENST00000553555 ZFP57Q9NU63 452 aa11.07□□□□□ -0.64
APEX1-205ENST00000553555 TMEM140Q9NV12 185 aa11.07□□□□□ -0.64
APEX1-205ENST00000553555 AKAP9Q99996 3911 aa11.06□□□□□ -0.64
APEX1-205ENST00000553555 TRAV40A0A0B4J280 105 aa11.06□□□□□ -0.64
APEX1-205ENST00000553555 K7EPK0 472 aa11.06□□□□□ -0.64
APEX1-205ENST00000553555 PLXNB1O43157 2135 aa11.06□□□□□ -0.64
APEX1-205ENST00000553555 ST8SIA3O43173 380 aa11.06□□□□□ -0.64
APEX1-205ENST00000553555 LYL1P12980 280 aa11.06□□□□□ -0.64
APEX1-205ENST00000553555 PAX6P26367 422 aa11.06□□□□□ -0.64
APEX1-205ENST00000553555 NKX2-1P43699 371 aaPredicted RBP11.06□□□□□ -0.64
APEX1-205ENST00000553555 S100A10P60903 97 aa11.06□□□□□ -0.64
APEX1-205ENST00000553555 IFITM2Q01629 132 aa11.06□□□□□ -0.64
APEX1-205ENST00000553555 GPR157Q5UAW9 335 aa11.06□□□□□ -0.64
APEX1-205ENST00000553555 OR4A47Q6IF82 309 aa11.06□□□□□ -0.64
APEX1-205ENST00000553555 PRSS54Q6PEW0 395 aa11.06□□□□□ -0.64
APEX1-205ENST00000553555 FOXRED2Q8IWF2 684 aa11.06□□□□□ -0.64
APEX1-205ENST00000553555 FAM71E2Q8N5Q1 922 aa11.06□□□□□ -0.64
APEX1-205ENST00000553555 RITA1Q96K30 269 aa11.06□□□□□ -0.64
APEX1-205ENST00000553555 HARBI1Q96MB7 349 aa11.06□□□□□ -0.64
APEX1-205ENST00000553555 LSM5Q9Y4Y9 91 aaKnown RBP11.06□□□□□ -0.64
APEX1-205ENST00000553555 POMT1Q9Y6A1 747 aa11.06□□□□□ -0.64
APEX1-205ENST00000553555 MYO9AB2RTY4 2548 aa11.06□□□□□ -0.64
APEX1-205ENST00000553555 FLNAP21333 2647 aaKnown RBP11.06□□□□□ -0.64
APEX1-205ENST00000553555 ZNF469Q96JG9 3925 aaPredicted RBP11.06□□□□□ -0.64
APEX1-205ENST00000553555 IGHV3OR16-10A0A075B7F0 116 aa11.06□□□□□ -0.64
APEX1-205ENST00000553555 FXYD6-FXYD2A0A087WZ82 144 aa11.06□□□□□ -0.64
APEX1-205ENST00000553555 TRAV3A0A0B4J244 114 aa11.06□□□□□ -0.64
APEX1-205ENST00000553555 HMSDA8MTL9 139 aa11.06□□□□□ -0.64
APEX1-205ENST00000553555 DEDDO75618 318 aa11.06□□□□□ -0.64
APEX1-205ENST00000553555 VENTXO95231 258 aa11.06□□□□□ -0.64
APEX1-205ENST00000553555 IGLV2-23P01705 113 aa11.06□□□□□ -0.64
APEX1-205ENST00000553555 RLN2P04090 185 aa11.06□□□□□ -0.64
APEX1-205ENST00000553555 IGHV4-38-2P0DP08 117 aa11.06□□□□□ -0.64
APEX1-205ENST00000553555 LGALS7P47929 136 aa11.06□□□□□ -0.64
APEX1-205ENST00000553555 RELBQ01201 579 aa11.06□□□□□ -0.64
APEX1-205ENST00000553555 KLF17Q5JT82 389 aaPredicted RBP11.06□□□□□ -0.64
APEX1-205ENST00000553555 RUSC1-AS1Q66K80 236 aa11.06□□□□□ -0.64
APEX1-205ENST00000553555 TMEM65Q6PI78 240 aa11.06□□□□□ -0.64
APEX1-205ENST00000553555 PUSL1Q8N0Z8 303 aaKnown RBP11.06□□□□□ -0.64
APEX1-205ENST00000553555 OR5AC2Q9NZP5 309 aa11.06□□□□□ -0.64
APEX1-205ENST00000553555 MBD2Q9UBB5 411 aa11.06□□□□□ -0.64
APEX1-205ENST00000553555 NSG2Q9Y328 171 aa11.06□□□□□ -0.64
APEX1-205ENST00000553555 FAM90A26D6RGX4 464 aa11.05□□□□□ -0.64
APEX1-205ENST00000553555 PET100P0DJ07 73 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms