RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 INPP1P49441 399 aa11.74□□□□□ -0.53
MTHFD1-204ENST00000553405 COMPP49747 757 aaPredicted RBP11.74□□□□□ -0.53
MTHFD1-204ENST00000553405 UBE2KP61086 200 aa11.74□□□□□ -0.53
MTHFD1-204ENST00000553405 RPS16P62249 146 aaKnown RBP11.74□□□□□ -0.53
MTHFD1-204ENST00000553405 RBMS2Q15434 407 aaKnown RBP11.74□□□□□ -0.53
MTHFD1-204ENST00000553405 PUSL1Q8N0Z8 303 aaKnown RBP11.74□□□□□ -0.53
MTHFD1-204ENST00000553405 TSNAXQ99598 290 aaKnown RBP11.74□□□□□ -0.53
MTHFD1-204ENST00000553405 HSPB9Q9BQS6 159 aa11.74□□□□□ -0.53
MTHFD1-204ENST00000553405 FBXL15Q9H469 300 aa11.74□□□□□ -0.53
MTHFD1-204ENST00000553405 PLEKHA2Q9HB19 425 aa11.74□□□□□ -0.53
MTHFD1-204ENST00000553405 MMP24Q9Y5R2 645 aa11.74□□□□□ -0.53
MTHFD1-204ENST00000553405 CMYA5Q8N3K9 4069 aa11.74□□□□□ -0.53
MTHFD1-204ENST00000553405 SHOXO15266 292 aa11.73□□□□□ -0.53
MTHFD1-204ENST00000553405 SLC25A17O43808 307 aa11.73□□□□□ -0.53
MTHFD1-204ENST00000553405 HPRT1P00492 218 aa11.73□□□□□ -0.53
MTHFD1-204ENST00000553405 SAA1P0DJI8 122 aaPredicted RBP11.73□□□□□ -0.53
MTHFD1-204ENST00000553405 MDKP21741 143 aaPredicted RBP11.73□□□□□ -0.53
MTHFD1-204ENST00000553405 UCP1P25874 307 aa11.73□□□□□ -0.53
MTHFD1-204ENST00000553405 NDPQ00604 133 aa11.73□□□□□ -0.53
MTHFD1-204ENST00000553405 DHODHQ02127 395 aa11.73□□□□□ -0.53
MTHFD1-204ENST00000553405 PJVKQ0ZLH3 352 aa11.73□□□□□ -0.53
MTHFD1-204ENST00000553405 TMEM95Q3KNT9 176 aa11.73□□□□□ -0.53
MTHFD1-204ENST00000553405 VKORC1L1Q8N0U8 176 aa11.73□□□□□ -0.53
MTHFD1-204ENST00000553405 CD300LFQ8TDQ1 290 aa11.73□□□□□ -0.53
MTHFD1-204ENST00000553405 GALNT14Q96FL9 552 aa11.73□□□□□ -0.53
MTHFD1-204ENST00000553405 WNT10AQ9GZT5 417 aa11.73□□□□□ -0.53
MTHFD1-204ENST00000553405 NAA60Q9H7X0 242 aa11.73□□□□□ -0.53
MTHFD1-204ENST00000553405 COMMD9Q9P000 198 aa11.73□□□□□ -0.53
MTHFD1-204ENST00000553405 TRRAPQ9Y4A5 3859 aa11.72□□□□□ -0.53
MTHFD1-204ENST00000553405 IGHV7-81A0A0B4J1V7 117 aa11.72□□□□□ -0.53
MTHFD1-204ENST00000553405 C3orf85A0A1B0GTC6 90 aa11.72□□□□□ -0.53
MTHFD1-204ENST00000553405 P0C879 139 aa11.72□□□□□ -0.53
MTHFD1-204ENST00000553405 LPAR6P43657 344 aa11.72□□□□□ -0.53
MTHFD1-204ENST00000553405 PROK1P58294 105 aa11.72□□□□□ -0.53
MTHFD1-204ENST00000553405 TAS2R31P59538 309 aa11.72□□□□□ -0.53
MTHFD1-204ENST00000553405 CADM3Q8N126 398 aa11.72□□□□□ -0.53
MTHFD1-204ENST00000553405 CCDC71LQ8N9Z2 235 aa11.72□□□□□ -0.53
MTHFD1-204ENST00000553405 TEX45Q8NA69 505 aa11.72□□□□□ -0.53
MTHFD1-204ENST00000553405 LHFPL5Q8TAF8 219 aa11.72□□□□□ -0.53
MTHFD1-204ENST00000553405 GLYATL2Q8WU03 294 aa11.72□□□□□ -0.53
MTHFD1-204ENST00000553405 TMEM158Q8WZ71 300 aa11.72□□□□□ -0.53
MTHFD1-204ENST00000553405 RHOVQ96L33 236 aa11.72□□□□□ -0.53
MTHFD1-204ENST00000553405 SCGB3A2Q96PL1 93 aa11.72□□□□□ -0.53
MTHFD1-204ENST00000553405 PRSS22Q9GZN4 317 aa11.72□□□□□ -0.53
MTHFD1-204ENST00000553405 COPZ2Q9P299 210 aa11.72□□□□□ -0.53
MTHFD1-204ENST00000553405 METTL1Q9UBP6 276 aaKnown RBP11.72□□□□□ -0.53
MTHFD1-204ENST00000553405 FLVCR2Q9UPI3 526 aa11.72□□□□□ -0.53
MTHFD1-204ENST00000553405 C14orf166Q9Y224 244 aaKnown RBP11.72□□□□□ -0.53
MTHFD1-204ENST00000553405 CLPSL1A2RUU4 121 aa11.71□□□□□ -0.53
MTHFD1-204ENST00000553405 CENPXA8MT69 81 aa11.71□□□□□ -0.53
MTHFD1-204ENST00000553405 ARPC1BO15143 372 aaKnown RBP11.71□□□□□ -0.53
MTHFD1-204ENST00000553405 CRYBA1P05813 215 aa11.71□□□□□ -0.53
MTHFD1-204ENST00000553405 EGR2P11161 476 aaPredicted RBP11.71□□□□□ -0.53
MTHFD1-204ENST00000553405 PRSS8Q16651 343 aa11.71□□□□□ -0.53
MTHFD1-204ENST00000553405 SP6Q3SY56 376 aa11.71□□□□□ -0.53
MTHFD1-204ENST00000553405 C19orf54Q5BKX5 351 aa11.71□□□□□ -0.53
MTHFD1-204ENST00000553405 SLC25A42Q86VD7 318 aa11.71□□□□□ -0.53
MTHFD1-204ENST00000553405 PPP1R27Q86WC6 154 aa11.71□□□□□ -0.53
MTHFD1-204ENST00000553405 OR4F5Q8NH21 305 aa11.71□□□□□ -0.53
MTHFD1-204ENST00000553405 TMEM167AQ8TBQ9 72 aa11.71□□□□□ -0.53
MTHFD1-204ENST00000553405 SEC22AQ96IW7 307 aa11.71□□□□□ -0.53
MTHFD1-204ENST00000553405 TSC22D3Q99576 134 aa11.71□□□□□ -0.53
MTHFD1-204ENST00000553405 TMEM222Q9H0R3 208 aa11.71□□□□□ -0.53
MTHFD1-204ENST00000553405 ZNF580Q9UK33 172 aa11.71□□□□□ -0.53
MTHFD1-204ENST00000553405 FBXO7Q9Y3I1 522 aa11.71□□□□□ -0.53
MTHFD1-204ENST00000553405 B3GALNT1O75752 331 aa11.7□□□□□ -0.54
MTHFD1-204ENST00000553405 CDS2O95674 445 aa11.7□□□□□ -0.54
MTHFD1-204ENST00000553405 IGKV1-5P01602 117 aa11.7□□□□□ -0.54
MTHFD1-204ENST00000553405 OR5AC1P0C628 307 aa11.7□□□□□ -0.54
MTHFD1-204ENST00000553405 NQO2P16083 231 aa11.7□□□□□ -0.54
MTHFD1-204ENST00000553405 S100GP29377 79 aa11.7□□□□□ -0.54
MTHFD1-204ENST00000553405 MECP2P51608 486 aaKnown RBP11.7□□□□□ -0.54
MTHFD1-204ENST00000553405 KRTAP10-3P60369 221 aa11.7□□□□□ -0.54
MTHFD1-204ENST00000553405 CX3CL1P78423 397 aa11.7□□□□□ -0.54
MTHFD1-204ENST00000553405 CBX3Q13185 183 aa11.7□□□□□ -0.54
MTHFD1-204ENST00000553405 TMEM187Q14656 261 aa11.7□□□□□ -0.54
MTHFD1-204ENST00000553405 AWAT1Q58HT5 328 aa11.7□□□□□ -0.54
MTHFD1-204ENST00000553405 OR4A47Q6IF82 309 aa11.7□□□□□ -0.54
MTHFD1-204ENST00000553405 LIN54Q6MZP7 749 aa11.7□□□□□ -0.54
MTHFD1-204ENST00000553405 POC5Q8NA72 575 aa11.7□□□□□ -0.54
MTHFD1-204ENST00000553405 R3HDM4Q96D70 268 aa11.7□□□□□ -0.54
MTHFD1-204ENST00000553405 TMEM56Q96MV1 263 aa11.7□□□□□ -0.54
MTHFD1-204ENST00000553405 RASL11BQ9BPW5 248 aa11.7□□□□□ -0.54
MTHFD1-204ENST00000553405 ZNF430Q9H8G1 570 aaPredicted RBP11.7□□□□□ -0.54
MTHFD1-204ENST00000553405 BET1LQ9NYM9 111 aa11.7□□□□□ -0.54
MTHFD1-204ENST00000553405 KIAA1456Q9P272 454 aa11.7□□□□□ -0.54
MTHFD1-204ENST00000553405 TMEM56-RWDD3S4R434 201 aa11.7□□□□□ -0.54
MTHFD1-204ENST00000553405 TRAV3A0A0B4J244 114 aa11.69□□□□□ -0.54
MTHFD1-204ENST00000553405 TEX13DA0A0J9YY54 714 aaPredicted RBP11.69□□□□□ -0.54
MTHFD1-204ENST00000553405 A0A1B0GW64 132 aa11.69□□□□□ -0.54
MTHFD1-204ENST00000553405 MARCH11A6NNE9 402 aa11.69□□□□□ -0.54
MTHFD1-204ENST00000553405 KBTBD11O94819 623 aa11.69□□□□□ -0.54
MTHFD1-204ENST00000553405 OR2A4O95047 310 aa11.69□□□□□ -0.54
MTHFD1-204ENST00000553405 CA2P00918 260 aa11.69□□□□□ -0.54
MTHFD1-204ENST00000553405 HRASP01112 189 aa11.69□□□□□ -0.54
MTHFD1-204ENST00000553405 TCRBP04435 133 aa11.69□□□□□ -0.54
MTHFD1-204ENST00000553405 IGF1P05019 195 aa11.69□□□□□ -0.54
MTHFD1-204ENST00000553405 CRIP2P52943 208 aaPredicted RBP11.69□□□□□ -0.54
MTHFD1-204ENST00000553405 CFHR3Q02985 330 aa11.69□□□□□ -0.54
MTHFD1-204ENST00000553405 PPP1R1AQ13522 171 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms