RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 VMA21Q3ZAQ7 101 aa12.24□□□□□ -0.45
CDK4-215ENST00000553237 OR2B11Q5JQS5 317 aa12.24□□□□□ -0.45
CDK4-215ENST00000553237 ZNF645Q8N7E2 425 aa12.24□□□□□ -0.45
CDK4-215ENST00000553237 BEST4Q8NFU0 473 aa12.24□□□□□ -0.45
CDK4-215ENST00000553237 ACOT12Q8WYK0 555 aa12.24□□□□□ -0.45
CDK4-215ENST00000553237 PHB2Q99623 299 aa12.24□□□□□ -0.45
CDK4-215ENST00000553237 ASCL2Q99929 193 aa12.24□□□□□ -0.45
CDK4-215ENST00000553237 DCUN1D5Q9BTE7 237 aa12.24□□□□□ -0.45
CDK4-215ENST00000553237 IGKV1D-13A0A0B4J2D9 117 aa12.23□□□□□ -0.45
CDK4-215ENST00000553237 C13orf42A0A1B0GVH6 325 aa12.23□□□□□ -0.45
CDK4-215ENST00000553237 ANKRD34BA5PLL1 514 aa12.23□□□□□ -0.45
CDK4-215ENST00000553237 MEIS3P1A6NDR6 274 aa12.23□□□□□ -0.45
CDK4-215ENST00000553237 FCGR3BO75015 233 aa12.23□□□□□ -0.45
CDK4-215ENST00000553237 HLA-DQB1P01920 261 aa12.23□□□□□ -0.45
CDK4-215ENST00000553237 IGKV1-13P0DP09 117 aa12.23□□□□□ -0.45
CDK4-215ENST00000553237 CBX5P45973 191 aa12.23□□□□□ -0.45
CDK4-215ENST00000553237 ARPC4P59998 168 aa12.23□□□□□ -0.45
CDK4-215ENST00000553237 UBE2KP61086 200 aa12.23□□□□□ -0.45
CDK4-215ENST00000553237 TNXAQ16473 311 aa12.23□□□□□ -0.45
CDK4-215ENST00000553237 CLVS1Q8IUQ0 354 aaPredicted RBP12.23□□□□□ -0.45
CDK4-215ENST00000553237 TEX45Q8NA69 505 aa12.23□□□□□ -0.45
CDK4-215ENST00000553237 RBMX2Q9Y388 322 aaKnown RBP12.23□□□□□ -0.45
CDK4-215ENST00000553237 H3BUA1 57 aa12.22□□□□□ -0.45
CDK4-215ENST00000553237 HPGDSO60760 199 aa12.22□□□□□ -0.45
CDK4-215ENST00000553237 APOA1P02647 267 aa12.22□□□□□ -0.45
CDK4-215ENST00000553237 ZNF182P17025 639 aaPredicted RBP12.22□□□□□ -0.45
CDK4-215ENST00000553237 RPL5P46777 297 aaKnown RBP12.22□□□□□ -0.45
CDK4-215ENST00000553237 RPL30P62888 115 aaKnown RBP12.22□□□□□ -0.45
CDK4-215ENST00000553237 PRSS8Q16651 343 aa12.22□□□□□ -0.45
CDK4-215ENST00000553237 ACSM6Q6P461 480 aa12.22□□□□□ -0.45
CDK4-215ENST00000553237 KCTD9Q7L273 389 aa12.22□□□□□ -0.45
CDK4-215ENST00000553237 OSR1Q8TAX0 266 aaPredicted RBP12.22□□□□□ -0.45
CDK4-215ENST00000553237 SNAPC3Q92966 411 aa12.22□□□□□ -0.45
CDK4-215ENST00000553237 TMEM68Q96MH6 324 aa12.22□□□□□ -0.45
CDK4-215ENST00000553237 CMTM3Q96MX0 182 aa12.22□□□□□ -0.45
CDK4-215ENST00000553237 RANGRFQ9HD47 186 aaPredicted RBP12.22□□□□□ -0.45
CDK4-215ENST00000553237 COA4Q9NYJ1 87 aa12.22□□□□□ -0.45
CDK4-215ENST00000553237 MRPS7Q9Y2R9 242 aaKnown RBP12.22□□□□□ -0.45
CDK4-215ENST00000553237 SORL1Q92673 2214 aa12.22□□□□□ -0.45
CDK4-215ENST00000553237 A0A0G2JLM5 398 aa12.21□□□□□ -0.45
CDK4-215ENST00000553237 SMIM31A0A1B0GVY4 71 aa12.21□□□□□ -0.45
CDK4-215ENST00000553237 IGLV2-14P01704 120 aa12.21□□□□□ -0.45
CDK4-215ENST00000553237 SAA1P0DJI8 122 aaPredicted RBP12.21□□□□□ -0.45
CDK4-215ENST00000553237 SPNP16150 400 aa12.21□□□□□ -0.45
CDK4-215ENST00000553237 ELK1P19419 428 aa12.21□□□□□ -0.45
CDK4-215ENST00000553237 SPCS2Q15005 226 aa12.21□□□□□ -0.45
CDK4-215ENST00000553237 MZT2AQ6P582 158 aa12.21□□□□□ -0.45
CDK4-215ENST00000553237 HAPLN4Q86UW8 402 aa12.21□□□□□ -0.45
CDK4-215ENST00000553237 SRSF12Q8WXF0 261 aaKnown RBP12.21□□□□□ -0.45
CDK4-215ENST00000553237 AP3S1Q92572 193 aa12.21□□□□□ -0.45
CDK4-215ENST00000553237 OR4C12Q96R67 309 aa12.21□□□□□ -0.45
CDK4-215ENST00000553237 TINAGL1Q9GZM7 467 aaPredicted RBP12.21□□□□□ -0.45
CDK4-215ENST00000553237 ZNF430Q9H8G1 570 aaPredicted RBP12.21□□□□□ -0.45
CDK4-215ENST00000553237 IFT46Q9NQC8 304 aa12.21□□□□□ -0.45
CDK4-215ENST00000553237 PRELID3BQ9Y3B1 194 aa12.21□□□□□ -0.45
CDK4-215ENST00000553237 MPPED1O15442 326 aa12.2□□□□□ -0.46
CDK4-215ENST00000553237 SLC22A5O76082 557 aa12.2□□□□□ -0.46
CDK4-215ENST00000553237 NHLRC4P0CG21 123 aaPredicted RBP12.2□□□□□ -0.46
CDK4-215ENST00000553237 FCGR2CP31995 323 aa12.2□□□□□ -0.46
CDK4-215ENST00000553237 PRSS3P35030 304 aa12.2□□□□□ -0.46
CDK4-215ENST00000553237 VKORC1L1Q8N0U8 176 aa12.2□□□□□ -0.46
CDK4-215ENST00000553237 TCTEX1D2Q8WW35 142 aa12.2□□□□□ -0.46
CDK4-215ENST00000553237 GPHA2Q96T91 129 aa12.2□□□□□ -0.46
CDK4-215ENST00000553237 TAS2R8Q9NYW2 309 aa12.2□□□□□ -0.46
CDK4-215ENST00000553237 SMAD5-AS1Q9Y6J3 95 aa12.2□□□□□ -0.46
CDK4-215ENST00000553237 FAM25AB3EWG3 89 aa12.19□□□□□ -0.46
CDK4-215ENST00000553237 FAM25CB3EWG5 89 aa12.19□□□□□ -0.46
CDK4-215ENST00000553237 FAM25GB3EWG6 89 aa12.19□□□□□ -0.46
CDK4-215ENST00000553237 RBMXL2O75526 392 aaKnown RBP12.19□□□□□ -0.46
CDK4-215ENST00000553237 ACTL6BO94805 426 aa12.19□□□□□ -0.46
CDK4-215ENST00000553237 GP9P14770 177 aa12.19□□□□□ -0.46
CDK4-215ENST00000553237 ZP3P21754 424 aa12.19□□□□□ -0.46
CDK4-215ENST00000553237 AADACP22760 399 aa12.19□□□□□ -0.46
CDK4-215ENST00000553237 TMBIM6P55061 237 aa12.19□□□□□ -0.46
CDK4-215ENST00000553237 CDK10Q15131 360 aa12.19□□□□□ -0.46
CDK4-215ENST00000553237 C10orf55Q5SWW7 151 aa12.19□□□□□ -0.46
CDK4-215ENST00000553237 SNX29P2Q8IUI4 249 aa12.19□□□□□ -0.46
CDK4-215ENST00000553237 ADAD2Q8NCV1 583 aaKnown RBP12.19□□□□□ -0.46
CDK4-215ENST00000553237 OR5AP2Q8NGF4 316 aa12.19□□□□□ -0.46
CDK4-215ENST00000553237 OR6Q1Q8NGQ2 317 aa12.19□□□□□ -0.46
CDK4-215ENST00000553237 RAB2BQ8WUD1 216 aa12.19□□□□□ -0.46
CDK4-215ENST00000553237 RSRP1Q9BUV0 290 aa12.19□□□□□ -0.46
CDK4-215ENST00000553237 ELOVL1Q9BW60 279 aa12.19□□□□□ -0.46
CDK4-215ENST00000553237 ANAPC10Q9UM13 185 aa12.19□□□□□ -0.46
CDK4-215ENST00000553237 TNCP24821 2201 aa12.19□□□□□ -0.46
CDK4-215ENST00000553237 TRBV12-3P01733 135 aa12.18□□□□□ -0.46
CDK4-215ENST00000553237 PRH1P02810 166 aa12.18□□□□□ -0.46
CDK4-215ENST00000553237 OR9G9P0C7N8 305 aa12.18□□□□□ -0.46
CDK4-215ENST00000553237 EIF4EBP1Q13541 118 aaPredicted RBP12.18□□□□□ -0.46
CDK4-215ENST00000553237 DYRK1AQ13627 763 aa12.18□□□□□ -0.46
CDK4-215ENST00000553237 OVCH2Q7RTZ1 564 aa12.18□□□□□ -0.46
CDK4-215ENST00000553237 MFSD4AQ8N468 514 aa12.18□□□□□ -0.46
CDK4-215ENST00000553237 SECTM1Q8WVN6 248 aa12.18□□□□□ -0.46
CDK4-215ENST00000553237 WWC2-AS2Q96NR7 200 aa12.18□□□□□ -0.46
CDK4-215ENST00000553237 HSD17B10Q99714 261 aaKnown RBP12.18□□□□□ -0.46
CDK4-215ENST00000553237 CCL28Q9NRJ3 127 aa12.18□□□□□ -0.46
CDK4-215ENST00000553237 PEF1Q9UBV8 284 aaKnown RBP12.18□□□□□ -0.46
CDK4-215ENST00000553237 U3KQK5 164 aa12.18□□□□□ -0.46
CDK4-215ENST00000553237 TNFSF12O43508 249 aa12.17□□□□□ -0.46
CDK4-215ENST00000553237 BRI3O95415 125 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms